2L5SA

Solution structure of the extracellular domain of the tgf-beta type i receptor
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
87
structure length
87
Chain Sequence
GSATALQCFCHLCTKDNFTCVTDGLCFVSVTETTDKVIHNSMCIAEIDLIPRDRPFVCAPSSKTGSVTTTYCCNQDHCNKIELPTTV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords TGF-beta receptor type-1
publication title The TbetaR-I Pre-Helix Extension Is Structurally Ordered in the Unbound Form and Its Flanking Prolines Are Essential for Binding
pubmed doi rcsb
source organism Homo sapiens
total genus 11
structure length 87
sequence length 87
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2010-11-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01064 Activin_recp Activin types I and II receptor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2l5sA00
2BHIA 2QJAC 1QKDA 1NXBA 1KU6B 1ONJA 1CODA 1MAHF 1YWHA 1IDGA 1M9ZA 2PJYB 3BT2U 2CRSA 2NBTA 4LFTA 3ERAA 5DO6A 4XJJA 2UX2A 1ERGA 3U74U 1KXIA 1FSSB 1FRAA 1IJCA 2H7ZA 1IDLA 2MHYA 4IYEA 2CDXA 1CDRA 1TXBA 1FFJA 3NEQA 6EBXA 2H5FA 2GOOB 2ABXA 2CRTA 1CDQA 3VTSA 4OM5A 4BIKB 2FD6U 2H8UA 1KC4A 1CXNA 1RL5A 2X8BB 4ZQYA 1KBAA 1HC9A 4AEAA 1IDIA 3EBXA 3BT1U 4HQPF 1HC9B 1S4YA 1IQ9A 3HH7A 4OM4A 1KL8A 1BTEA 3EVSC 1ZADA 1REWC 2UWRA 3NH7A 1HOYA 2VLWA 2QC1A 1KS6A 1NTNA 1QKEA 1RGJA 2H7ZB 1XT3A 3LAQU 2PJYC 1FSCA 1CDSA 1V6PA 1IK8A 1CRFA 5DZ5A 1TGXA 2I9BE 1LXGA 1NTXA 2ERAA 1BXPA 1I02A 4RUDA 1LXHA 3KFDI 4EY8B 2H62D 1CCQA 4UY2C 2BTXA 4FAOC 2L03A 1KBSA 1COEA 1JGKA 2GOOC 3QB4B 1IKCA 2J8BA 1CHVS 2MUOA 1TFSA 2H64B 1QM7A 1JE9A 1CB9A 1CVOA 1KFHA 2L5SA 1HAJA 2MFAA 1VB0A 1PLOA 2HLRA 1FASA 1ES7B 4DO8A 4P7UA 1L4WA 2N99A 2MJ4A 5IMYC 2CTXA 1FF4A 2LA1A 1TXAA 4FAOE 2MUPA 1LJZA 1LSIA 2OFSA 1JBDA 5IMTD 3NDSA 2QJBC 1HAAA 2QJ9C 3KFDE 3U73U 1F94A 1NYUA 2HLQA 2K3GA 4QTIU 1F8UB 1CDTA 1NEAA 1KTZB 1G6MA 2MJ0A 4BDTB 1DRSA 1W6BA 2MJYA 5EBXA 1H0JA 2CCXA 3FEVA 2JVEA 1KBTA 1LX5B 1IDHA 2H62C 5DU1A 1NYSA 2JQPA 1CREA 1CTXA 1ABTA 2H64C 3PLCA 1UG4A 2LCRA 1MR6A 1CXOA 1ERAA 1NORA 1B41B
chains in the Genus database with same CATH superfamily
2BHIA 2QJAC 1QKDA 1NXBA 1KU6B 1ONJA 1CODA 1MAHF 1YWHA 1IDGA 1M9ZA 2PJYB 3BT2U 2CRSA 2NBTA 4LFTA 3ERAA 5DO6A 4XJJA 2UX2A 1ERGA 3U74U 1KXIA 1FSSB 1FRAA 1IJCA 2H7ZA 1IDLA 2MHYA 4IYEA 2CDXA 1CDRA 1TXBA 1FFJA 3NEQA 6EBXA 2H5FA 2GOOB 2ABXA 2CRTA 1CDQA 3VTSA 4OM5A 4BIKB 2FD6U 2H8UA 1KC4A 1CXNA 1RL5A 2X8BB 4ZQYA 1KBAA 1HC9A 4AEAA 1IDIA 3EBXA 3BT1U 4HQPF 1HC9B 1S4YA 1IQ9A 3HH7A 4OM4A 1KL8A 1BTEA 3EVSC 1ZADA 1REWC 2UWRA 3NH7A 1HOYA 2VLWA 2QC1A 1KS6A 1NTNA 1QKEA 1RGJA 2H7ZB 1XT3A 3LAQU 2PJYC 1FSCA 1CDSA 1V6PA 1IK8A 1CRFA 5DZ5A 1TGXA 2I9BE 1LXGA 1NTXA 2ERAA 1BXPA 1I02A 4RUDA 1LXHA 3KFDI 4EY8B 2H62D 1CCQA 4UY2C 2BTXA 4FAOC 2L03A 1KBSA 1COEA 1JGKA 2GOOC 3QB4B 1IKCA 2J8BA 1CHVS 2MUOA 1TFSA 2H64B 1QM7A 1JE9A 1CB9A 1CVOA 1KFHA 2L5SA 1HAJA 2MFAA 1VB0A 1PLOA 2HLRA 1FASA 1ES7B 4DO8A 4P7UA 1L4WA 2N99A 2MJ4A 5IMYC 2CTXA 1FF4A 4KSNA 2LA1A 1TXAA 4FAOE 2MUPA 1LJZA 1LSIA 2OFSA 1JBDA 5IMTD 3NDSA 2QJBC 1HAAA 2QJ9C 3KFDE 3U73U 1F94A 1NYUA 2HLQA 2K3GA 4QTIU 1F8UB 1CDTA 1NEAA 1KTZB 1G6MA 2MJ0A 4BDTB 1DRSA 1W6BA 2MJYA 5EBXA 1H0JA 2CCXA 3FEVA 2JVEA 1KBTA 1LX5B 1IDHA 2H62C 5DU1A 1NYSA 2JQPA 1CREA 1CTXA 1ABTA 2H64C 3PLCA 1UG4A 2LCRA 1MR6A 1CXOA 1ERAA 1NORA 1B41B
chains in the Genus database with same CATH topology
2BHIA 2QJAC 1QKDA 1NXBA 1KU6B 1ONJA 1CODA 1MAHF 1YWHA 1IDGA 1M9ZA 2PJYB 3BT2U 2CRSA 2NBTA 4LFTA 3ERAA 5DO6A 4XJJA 2UX2A 1ERGA 3U74U 1KXIA 1FSSB 1FRAA 1IJCA 2H7ZA 1IDLA 2MHYA 4IYEA 2CDXA 1CDRA 1TXBA 1FFJA 3NEQA 6EBXA 2H5FA 2GOOB 2ABXA 2CRTA 1CDQA 3VTSA 4OM5A 4BIKB 2FD6U 2H8UA 1KC4A 1CXNA 1RL5A 2X8BB 4ZQYA 1KBAA 1HC9A 4AEAA 1IDIA 3EBXA 3BT1U 4HQPF 1HC9B 1S4YA 1IQ9A 3HH7A 4OM4A 1KL8A 1BTEA 3EVSC 1ZADA 1REWC 2UWRA 3NH7A 1HOYA 2VLWA 2QC1A 1KS6A 1NTNA 1QKEA 1RGJA 2H7ZB 1XT3A 3LAQU 2PJYC 1FSCA 1CDSA 1V6PA 1IK8A 1CRFA 5DZ5A 1TGXA 2I9BE 1LXGA 1NTXA 2ERAA 1BXPA 1I02A 4RUDA 1LXHA 3KFDI 4EY8B 2H62D 1CCQA 4UY2C 2BTXA 4FAOC 2L03A 1KBSA 1COEA 1JGKA 2GOOC 3QB4B 1IKCA 2J8BA 1CHVS 2MUOA 1TFSA 2H64B 1QM7A 1JE9A 1CB9A 1CVOA 1KFHA 2L5SA 1HAJA 2MFAA 1VB0A 1PLOA 2HLRA 1FASA 1ES7B 4DO8A 4P7UA 1L4WA 2N99A 2MJ4A 5IMYC 2CTXA 1FF4A 4KSNA 2LA1A 1TXAA 4FAOE 2MUPA 1LJZA 1LSIA 2OFSA 1JBDA 5IMTD 3NDSA 2QJBC 1HAAA 2QJ9C 3KFDE 3U73U 1F94A 1NYUA 2HLQA 2K3GA 4QTIU 1F8UB 1CDTA 1NEAA 1KTZB 1G6MA 2MJ0A 4BDTB 1DRSA 1W6BA 2MJYA 5EBXA 1H0JA 2CCXA 3FEVA 2JVEA 1KBTA 1LX5B 1IDHA 2H62C 5DU1A 1NYSA 2JQPA 1CREA 1CTXA 1ABTA 2H64C 3PLCA 1UG4A 2LCRA 1MR6A 1CXOA 1ERAA 1NORA 1B41B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BHI A;  2QJA C;  1QKD A;  1NXB A;  1KU6 B;  1ONJ A;  1COD A;  1MAH F;  1YWH A;  1IDG A;  1M9Z A;  2PJY B;  3BT2 U;  2CRS A;  2NBT A;  4LFT A;  3ERA A;  5DO6 A;  4XJJ A;  2UX2 A;  1ERG A;  3U74 U;  1KXI A;  1FSS B;  1FRA A;  1IJC A;  2H7Z A;  1IDL A;  2MHY A;  4IYE A;  2CDX A;  1CDR A;  1TXB A;  1FFJ A;  3NEQ A;  6EBX A;  2H5F A;  2GOO B;  2ABX A;  2CRT A;  1CDQ A;  3VTS A;  4OM5 A;  4BIK B;  2FD6 U;  2H8U A;  1KC4 A;  1CXN A;  1RL5 A;  2X8B B;  4ZQY A;  1KBA A;  1HC9 A;  4AEA A;  1IDI A;  3EBX A;  3BT1 U;  4HQP F;  1HC9 B;  1S4Y A;  1IQ9 A;  3HH7 A;  4OM4 A;  1KL8 A;  1BTE A;  3EVS C;  1ZAD A;  1REW C;  2UWR A;  3NH7 A;  1HOY A;  2VLW A;  2QC1 A;  1KS6 A;  1NTN A;  1QKE A;  1RGJ A;  2H7Z B;  1XT3 A;  3LAQ U;  2PJY C;  1FSC A;  1CDS A;  1V6P A;  1IK8 A;  1CRF A;  5DZ5 A;  1TGX A;  2I9B E;  1LXG A;  1NTX A;  2ERA A;  1BXP A;  1I02 A;  4RUD A;  1LXH A;  3KFD I;  4EY8 B;  2H62 D;  1CCQ A;  4UY2 C;  2BTX A;  4FAO C;  2L03 A;  1KBS A;  1COE A;  1JGK A;  2GOO C;  3QB4 B;  1IKC A;  2J8B A;  1CHV S;  2MUO A;  1TFS A;  2H64 B;  1QM7 A;  1JE9 A;  1CB9 A;  1CVO A;  1KFH A;  2L5S A;  1HAJ A;  2MFA A;  1VB0 A;  1PLO A;  2HLR A;  1FAS A;  1ES7 B;  4DO8 A;  4P7U A;  1L4W A;  2N99 A;  2MJ4 A;  5IMY C;  2CTX A;  1FF4 A;  2LA1 A;  1TXA A;  4FAO E;  2MUP A;  1LJZ A;  1LSI A;  2OFS A;  1JBD A;  5IMT D;  3NDS A;  2QJB C;  1HAA A;  2QJ9 C;  3KFD E;  3U73 U;  1F94 A;  1NYU A;  2HLQ A;  2K3G A;  4QTI U;  1F8U B;  1CDT A;  1NEA A;  1KTZ B;  1G6M A;  2MJ0 A;  4BDT B;  1DRS A;  1W6B A;  2MJY A;  5EBX A;  1H0J A;  2CCX A;  3FEV A;  2JVE A;  1KBT A;  1LX5 B;  1IDH A;  2H62 C;  5DU1 A;  1NYS A;  2JQP A;  1CRE A;  1CTX A;  1ABT A;  2H64 C;  3PLC A;  1UG4 A;  2LCR A;  1MR6 A;  1CXO A;  1ERA A;  1NOR A;  1B41 B; 
#chains in the Genus database with same CATH topology
 2BHI A;  2QJA C;  1QKD A;  1NXB A;  1KU6 B;  1ONJ A;  1COD A;  1MAH F;  1YWH A;  1IDG A;  1M9Z A;  2PJY B;  3BT2 U;  2CRS A;  2NBT A;  4LFT A;  3ERA A;  5DO6 A;  4XJJ A;  2UX2 A;  1ERG A;  3U74 U;  1KXI A;  1FSS B;  1FRA A;  1IJC A;  2H7Z A;  1IDL A;  2MHY A;  4IYE A;  2CDX A;  1CDR A;  1TXB A;  1FFJ A;  3NEQ A;  6EBX A;  2H5F A;  2GOO B;  2ABX A;  2CRT A;  1CDQ A;  3VTS A;  4OM5 A;  4BIK B;  2FD6 U;  2H8U A;  1KC4 A;  1CXN A;  1RL5 A;  2X8B B;  4ZQY A;  1KBA A;  1HC9 A;  4AEA A;  1IDI A;  3EBX A;  3BT1 U;  4HQP F;  1HC9 B;  1S4Y A;  1IQ9 A;  3HH7 A;  4OM4 A;  1KL8 A;  1BTE A;  3EVS C;  1ZAD A;  1REW C;  2UWR A;  3NH7 A;  1HOY A;  2VLW A;  2QC1 A;  1KS6 A;  1NTN A;  1QKE A;  1RGJ A;  2H7Z B;  1XT3 A;  3LAQ U;  2PJY C;  1FSC A;  1CDS A;  1V6P A;  1IK8 A;  1CRF A;  5DZ5 A;  1TGX A;  2I9B E;  1LXG A;  1NTX A;  2ERA A;  1BXP A;  1I02 A;  4RUD A;  1LXH A;  3KFD I;  4EY8 B;  2H62 D;  1CCQ A;  4UY2 C;  2BTX A;  4FAO C;  2L03 A;  1KBS A;  1COE A;  1JGK A;  2GOO C;  3QB4 B;  1IKC A;  2J8B A;  1CHV S;  2MUO A;  1TFS A;  2H64 B;  1QM7 A;  1JE9 A;  1CB9 A;  1CVO A;  1KFH A;  2L5S A;  1HAJ A;  2MFA A;  1VB0 A;  1PLO A;  2HLR A;  1FAS A;  1ES7 B;  4DO8 A;  4P7U A;  1L4W A;  2N99 A;  2MJ4 A;  5IMY C;  2CTX A;  1FF4 A;  4KSN A;  2LA1 A;  1TXA A;  4FAO E;  2MUP A;  1LJZ A;  1LSI A;  2OFS A;  1JBD A;  5IMT D;  3NDS A;  2QJB C;  1HAA A;  2QJ9 C;  3KFD E;  3U73 U;  1F94 A;  1NYU A;  2HLQ A;  2K3G A;  4QTI U;  1F8U B;  1CDT A;  1NEA A;  1KTZ B;  1G6M A;  2MJ0 A;  4BDT B;  1DRS A;  1W6B A;  2MJY A;  5EBX A;  1H0J A;  2CCX A;  3FEV A;  2JVE A;  1KBT A;  1LX5 B;  1IDH A;  2H62 C;  5DU1 A;  1NYS A;  2JQP A;  1CRE A;  1CTX A;  1ABT A;  2H64 C;  3PLC A;  1UG4 A;  2LCR A;  1MR6 A;  1CXO A;  1ERA A;  1NOR A;  1B41 B; 
#chains in the Genus database with same CATH homology
 2BHI A;  2QJA C;  1QKD A;  1NXB A;  1KU6 B;  1ONJ A;  1COD A;  1MAH F;  1YWH A;  1IDG A;  1M9Z A;  2PJY B;  3BT2 U;  2CRS A;  2NBT A;  4LFT A;  3ERA A;  5DO6 A;  4XJJ A;  2UX2 A;  1ERG A;  3U74 U;  1KXI A;  1FSS B;  1FRA A;  1IJC A;  2H7Z A;  1IDL A;  2MHY A;  4IYE A;  2CDX A;  1CDR A;  1TXB A;  1FFJ A;  3NEQ A;  6EBX A;  2H5F A;  2GOO B;  2ABX A;  2CRT A;  1CDQ A;  3VTS A;  4OM5 A;  4BIK B;  2FD6 U;  2H8U A;  1KC4 A;  1CXN A;  1RL5 A;  2X8B B;  4ZQY A;  1KBA A;  1HC9 A;  4AEA A;  1IDI A;  3EBX A;  3BT1 U;  4HQP F;  1HC9 B;  1S4Y A;  1IQ9 A;  3HH7 A;  4OM4 A;  1KL8 A;  1BTE A;  3EVS C;  1ZAD A;  1REW C;  2UWR A;  3NH7 A;  1HOY A;  2VLW A;  2QC1 A;  1KS6 A;  1NTN A;  1QKE A;  1RGJ A;  2H7Z B;  1XT3 A;  3LAQ U;  2PJY C;  1FSC A;  1CDS A;  1V6P A;  1IK8 A;  1CRF A;  5DZ5 A;  1TGX A;  2I9B E;  1LXG A;  1NTX A;  2ERA A;  1BXP A;  1I02 A;  4RUD A;  1LXH A;  3KFD I;  4EY8 B;  2H62 D;  1CCQ A;  4UY2 C;  2BTX A;  4FAO C;  2L03 A;  1KBS A;  1COE A;  1JGK A;  2GOO C;  3QB4 B;  1IKC A;  2J8B A;  1CHV S;  2MUO A;  1TFS A;  2H64 B;  1QM7 A;  1JE9 A;  1CB9 A;  1CVO A;  1KFH A;  2L5S A;  1HAJ A;  2MFA A;  1VB0 A;  1PLO A;  2HLR A;  1FAS A;  1ES7 B;  4DO8 A;  4P7U A;  1L4W A;  2N99 A;  2MJ4 A;  5IMY C;  2CTX A;  1FF4 A;  4KSN A;  2LA1 A;  1TXA A;  4FAO E;  2MUP A;  1LJZ A;  1LSI A;  2OFS A;  1JBD A;  5IMT D;  3NDS A;  2QJB C;  1HAA A;  2QJ9 C;  3KFD E;  3U73 U;  1F94 A;  1NYU A;  2HLQ A;  2K3G A;  4QTI U;  1F8U B;  1CDT A;  1NEA A;  1KTZ B;  1G6M A;  2MJ0 A;  4BDT B;  1DRS A;  1W6B A;  2MJY A;  5EBX A;  1H0J A;  2CCX A;  3FEV A;  2JVE A;  1KBT A;  1LX5 B;  1IDH A;  2H62 C;  5DU1 A;  1NYS A;  2JQP A;  1CRE A;  1CTX A;  1ABT A;  2H64 C;  3PLC A;  1UG4 A;  2LCR A;  1MR6 A;  1CXO A;  1ERA A;  1NOR A;  1B41 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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