2MFAA

Mambalgin-2
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
57
structure length
57
Chain Sequence
LKCFQHGKVVTCHRDMKFCYHNTGMPFRNLKLILQGCSSSCSETENNKCCSTDRCNK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords Mambalgin-2
publication title Chemical synthesis, 3D structure, and ASIC binding site of the toxin mambalgin-2.
pubmed doi rcsb
total genus 10
structure length 57
sequence length 57
ec nomenclature
pdb deposition date 2013-10-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2mfaA00
2H64C 4QTIU 2MFAA 3U74U 1QKEA 1H0JA 1FASA 3ERAA 3KFDI 1LX5B 1KBSA 1NTNA 4P7UA 1CDTA 1CHVS 2H62D 1MR6A 1NYSA 1LXGA 1FF4A 1NTXA 2ABXA 3NEQA 1MAHF 1IKCA 4EY8B 1KFHA 1I02A 1RGJA 2BTXA 1KU6B 4LFTA 2GOOB 1JBDA 1BXPA 1ERGA 1FSCA 1HC9A 1LJZA 2X8BB 1CB9A 1LSIA 4OM5A 1ONJA 1ABTA 1KBAA 3HH7A 2GOOC 1IDLA 3U73U 1NORA 1NYUA 2K3GA 1CXNA 1HAAA 2UWRA 2CCXA 2MJYA 3BT2U 3QB4B 1TXAA 5IMTD 1CTXA 1ZADA 2H7ZB 2J8BA 1CCQA 1IQ9A 2MUOA 3FEVA 2MHYA 2LCRA 1CDQA 5DO6A 1IDHA 1CRFA 1L4WA 1IDGA 5EBXA 1HC9B 1KTZB 3NDSA 4HQPF 1CDSA 2LA1A 4BDTB 3KFDE 4FAOE 1CVOA 1CREA 1IDIA 2H62C 2VLWA 2L5SA 2MJ4A 1QKDA 2OFSA 3NH7A 1LXHA 2QJBC 1TXBA 4AEAA 1IJCA 1W6BA 1CDRA 2L03A 3EBXA 2CRSA 1M9ZA 2HLRA 1HAJA 1F94A 2PJYB 1XT3A 4RUDA 2QC1A 1KL8A 1F8UB 1FRAA 2N99A 2MUPA 2QJ9C 2H5FA 2QJAC 1V6PA 5DU1A 1S4YA 2JQPA 1KS6A 1UG4A 2JVEA 6EBXA 4UY2C 4DO8A 1ES7B 2MJ0A 4OM4A 2ERAA 1COEA 1JGKA 1FSSB 1RL5A 1HOYA 1PLOA 2NBTA 2UX2A 3PLCA 1CXOA 1REWC 4XJJA 1NXBA 3LAQU 3VTSA 5DZ5A 5IMYC 1FFJA 2BHIA 1KC4A 1VB0A 1G6MA 1TGXA 1ERAA 1QM7A 2H8UA 2CTXA 1DRSA 1CODA 1NEAA 4ZQYA 4FAOC 1IK8A 4IYEA 1B41B 2H7ZA 3EVSC 4BIKB 2I9BE 2H64B 3BT1U 2CRTA 1JE9A 1BTEA 1KBTA 2CDXA 2FD6U 2PJYC 1YWHA 1KXIA 1TFSA 2HLQA
chains in the Genus database with same CATH superfamily
2H64C 4QTIU 2MFAA 3U74U 1QKEA 1H0JA 1FASA 3ERAA 3KFDI 1LX5B 1KBSA 1NTNA 4P7UA 1CDTA 1CHVS 2H62D 1MR6A 1NYSA 1LXGA 1FF4A 1NTXA 2ABXA 3NEQA 1MAHF 1IKCA 4EY8B 1KFHA 1I02A 1RGJA 2BTXA 1KU6B 4LFTA 2GOOB 1JBDA 1BXPA 1ERGA 1FSCA 1HC9A 1LJZA 2X8BB 1CB9A 1LSIA 4OM5A 1ONJA 1ABTA 1KBAA 3HH7A 2GOOC 1IDLA 3U73U 1NORA 1NYUA 2K3GA 1CXNA 1HAAA 2UWRA 2CCXA 2MJYA 3BT2U 3QB4B 1TXAA 5IMTD 1CTXA 1ZADA 2H7ZB 2J8BA 1CCQA 1IQ9A 2MUOA 3FEVA 2MHYA 2LCRA 1CDQA 5DO6A 1IDHA 1CRFA 1L4WA 1IDGA 5EBXA 1HC9B 1KTZB 3NDSA 4HQPF 1CDSA 2LA1A 4BDTB 3KFDE 4FAOE 1CVOA 1CREA 1IDIA 2H62C 2VLWA 2L5SA 2MJ4A 1QKDA 2OFSA 3NH7A 4KSNA 1LXHA 2QJBC 1TXBA 4AEAA 1IJCA 1W6BA 1CDRA 2L03A 3EBXA 2CRSA 1M9ZA 2HLRA 1HAJA 1F94A 2PJYB 1XT3A 4RUDA 2QC1A 1KL8A 1F8UB 1FRAA 2N99A 2MUPA 2QJ9C 2H5FA 2QJAC 1V6PA 5DU1A 1S4YA 2JQPA 1KS6A 1UG4A 2JVEA 6EBXA 4UY2C 4DO8A 1ES7B 2MJ0A 4OM4A 2ERAA 1COEA 1JGKA 1FSSB 1RL5A 1HOYA 1PLOA 2NBTA 2UX2A 3PLCA 1CXOA 1REWC 4XJJA 1NXBA 3LAQU 3VTSA 5DZ5A 5IMYC 1FFJA 2BHIA 1KC4A 1VB0A 1G6MA 1TGXA 1ERAA 1QM7A 2H8UA 2CTXA 1DRSA 1CODA 1NEAA 4ZQYA 4FAOC 1IK8A 4IYEA 1B41B 2H7ZA 3EVSC 4BIKB 2I9BE 2H64B 3BT1U 2CRTA 1JE9A 1BTEA 1KBTA 2CDXA 2FD6U 2PJYC 1YWHA 1KXIA 1TFSA 2HLQA
chains in the Genus database with same CATH topology
2H64C 4QTIU 2MFAA 3U74U 1QKEA 1H0JA 1FASA 3ERAA 3KFDI 1LX5B 1KBSA 1NTNA 4P7UA 1CDTA 1CHVS 2H62D 1MR6A 1NYSA 1LXGA 1FF4A 1NTXA 2ABXA 3NEQA 1MAHF 1IKCA 4EY8B 1KFHA 1I02A 1RGJA 2BTXA 1KU6B 4LFTA 2GOOB 1JBDA 1BXPA 1ERGA 1FSCA 1HC9A 1LJZA 2X8BB 1CB9A 1LSIA 4OM5A 1ONJA 1ABTA 1KBAA 3HH7A 2GOOC 1IDLA 3U73U 1NORA 1NYUA 2K3GA 1CXNA 1HAAA 2UWRA 2CCXA 2MJYA 3BT2U 3QB4B 1TXAA 5IMTD 1CTXA 1ZADA 2H7ZB 2J8BA 1CCQA 1IQ9A 2MUOA 3FEVA 2MHYA 2LCRA 1CDQA 5DO6A 1IDHA 1CRFA 1L4WA 1IDGA 5EBXA 1HC9B 1KTZB 3NDSA 4HQPF 1CDSA 2LA1A 4BDTB 3KFDE 4FAOE 1CVOA 1CREA 1IDIA 2H62C 2VLWA 2L5SA 2MJ4A 1QKDA 2OFSA 3NH7A 4KSNA 1LXHA 2QJBC 1TXBA 4AEAA 1IJCA 1W6BA 1CDRA 2L03A 3EBXA 2CRSA 1M9ZA 2HLRA 1HAJA 1F94A 2PJYB 1XT3A 4RUDA 2QC1A 1KL8A 1F8UB 1FRAA 2N99A 2MUPA 2QJ9C 2H5FA 2QJAC 1V6PA 5DU1A 1S4YA 2JQPA 1KS6A 1UG4A 2JVEA 6EBXA 4UY2C 4DO8A 1ES7B 2MJ0A 4OM4A 2ERAA 1COEA 1JGKA 1FSSB 1RL5A 1HOYA 1PLOA 2NBTA 2UX2A 3PLCA 1CXOA 1REWC 4XJJA 1NXBA 3LAQU 3VTSA 5DZ5A 5IMYC 1FFJA 2BHIA 1KC4A 1VB0A 1G6MA 1TGXA 1ERAA 1QM7A 2H8UA 2CTXA 1DRSA 1CODA 1NEAA 4ZQYA 4FAOC 1IK8A 4IYEA 1B41B 2H7ZA 3EVSC 4BIKB 2I9BE 2H64B 3BT1U 2CRTA 1JE9A 1BTEA 1KBTA 2CDXA 2FD6U 2PJYC 1YWHA 1KXIA 1TFSA 2HLQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H64 C;  4QTI U;  2MFA A;  3U74 U;  1QKE A;  1H0J A;  1FAS A;  3ERA A;  3KFD I;  1LX5 B;  1KBS A;  1NTN A;  4P7U A;  1CDT A;  1CHV S;  2H62 D;  1MR6 A;  1NYS A;  1LXG A;  1FF4 A;  1NTX A;  2ABX A;  3NEQ A;  1MAH F;  1IKC A;  4EY8 B;  1KFH A;  1I02 A;  1RGJ A;  2BTX A;  1KU6 B;  4LFT A;  2GOO B;  1JBD A;  1BXP A;  1ERG A;  1FSC A;  1HC9 A;  1LJZ A;  2X8B B;  1CB9 A;  1LSI A;  4OM5 A;  1ONJ A;  1ABT A;  1KBA A;  3HH7 A;  2GOO C;  1IDL A;  3U73 U;  1NOR A;  1NYU A;  2K3G A;  1CXN A;  1HAA A;  2UWR A;  2CCX A;  2MJY A;  3BT2 U;  3QB4 B;  1TXA A;  5IMT D;  1CTX A;  1ZAD A;  2H7Z B;  2J8B A;  1CCQ A;  1IQ9 A;  2MUO A;  3FEV A;  2MHY A;  2LCR A;  1CDQ A;  5DO6 A;  1IDH A;  1CRF A;  1L4W A;  1IDG A;  5EBX A;  1HC9 B;  1KTZ B;  3NDS A;  4HQP F;  1CDS A;  2LA1 A;  4BDT B;  3KFD E;  4FAO E;  1CVO A;  1CRE A;  1IDI A;  2H62 C;  2VLW A;  2L5S A;  2MJ4 A;  1QKD A;  2OFS A;  3NH7 A;  1LXH A;  2QJB C;  1TXB A;  4AEA A;  1IJC A;  1W6B A;  1CDR A;  2L03 A;  3EBX A;  2CRS A;  1M9Z A;  2HLR A;  1HAJ A;  1F94 A;  2PJY B;  1XT3 A;  4RUD A;  2QC1 A;  1KL8 A;  1F8U B;  1FRA A;  2N99 A;  2MUP A;  2QJ9 C;  2H5F A;  2QJA C;  1V6P A;  5DU1 A;  1S4Y A;  2JQP A;  1KS6 A;  1UG4 A;  2JVE A;  6EBX A;  4UY2 C;  4DO8 A;  1ES7 B;  2MJ0 A;  4OM4 A;  2ERA A;  1COE A;  1JGK A;  1FSS B;  1RL5 A;  1HOY A;  1PLO A;  2NBT A;  2UX2 A;  3PLC A;  1CXO A;  1REW C;  4XJJ A;  1NXB A;  3LAQ U;  3VTS A;  5DZ5 A;  5IMY C;  1FFJ A;  2BHI A;  1KC4 A;  1VB0 A;  1G6M A;  1TGX A;  1ERA A;  1QM7 A;  2H8U A;  2CTX A;  1DRS A;  1COD A;  1NEA A;  4ZQY A;  4FAO C;  1IK8 A;  4IYE A;  1B41 B;  2H7Z A;  3EVS C;  4BIK B;  2I9B E;  2H64 B;  3BT1 U;  2CRT A;  1JE9 A;  1BTE A;  1KBT A;  2CDX A;  2FD6 U;  2PJY C;  1YWH A;  1KXI A;  1TFS A;  2HLQ A; 
#chains in the Genus database with same CATH topology
 2H64 C;  4QTI U;  2MFA A;  3U74 U;  1QKE A;  1H0J A;  1FAS A;  3ERA A;  3KFD I;  1LX5 B;  1KBS A;  1NTN A;  4P7U A;  1CDT A;  1CHV S;  2H62 D;  1MR6 A;  1NYS A;  1LXG A;  1FF4 A;  1NTX A;  2ABX A;  3NEQ A;  1MAH F;  1IKC A;  4EY8 B;  1KFH A;  1I02 A;  1RGJ A;  2BTX A;  1KU6 B;  4LFT A;  2GOO B;  1JBD A;  1BXP A;  1ERG A;  1FSC A;  1HC9 A;  1LJZ A;  2X8B B;  1CB9 A;  1LSI A;  4OM5 A;  1ONJ A;  1ABT A;  1KBA A;  3HH7 A;  2GOO C;  1IDL A;  3U73 U;  1NOR A;  1NYU A;  2K3G A;  1CXN A;  1HAA A;  2UWR A;  2CCX A;  2MJY A;  3BT2 U;  3QB4 B;  1TXA A;  5IMT D;  1CTX A;  1ZAD A;  2H7Z B;  2J8B A;  1CCQ A;  1IQ9 A;  2MUO A;  3FEV A;  2MHY A;  2LCR A;  1CDQ A;  5DO6 A;  1IDH A;  1CRF A;  1L4W A;  1IDG A;  5EBX A;  1HC9 B;  1KTZ B;  3NDS A;  4HQP F;  1CDS A;  2LA1 A;  4BDT B;  3KFD E;  4FAO E;  1CVO A;  1CRE A;  1IDI A;  2H62 C;  2VLW A;  2L5S A;  2MJ4 A;  1QKD A;  2OFS A;  3NH7 A;  4KSN A;  1LXH A;  2QJB C;  1TXB A;  4AEA A;  1IJC A;  1W6B A;  1CDR A;  2L03 A;  3EBX A;  2CRS A;  1M9Z A;  2HLR A;  1HAJ A;  1F94 A;  2PJY B;  1XT3 A;  4RUD A;  2QC1 A;  1KL8 A;  1F8U B;  1FRA A;  2N99 A;  2MUP A;  2QJ9 C;  2H5F A;  2QJA C;  1V6P A;  5DU1 A;  1S4Y A;  2JQP A;  1KS6 A;  1UG4 A;  2JVE A;  6EBX A;  4UY2 C;  4DO8 A;  1ES7 B;  2MJ0 A;  4OM4 A;  2ERA A;  1COE A;  1JGK A;  1FSS B;  1RL5 A;  1HOY A;  1PLO A;  2NBT A;  2UX2 A;  3PLC A;  1CXO A;  1REW C;  4XJJ A;  1NXB A;  3LAQ U;  3VTS A;  5DZ5 A;  5IMY C;  1FFJ A;  2BHI A;  1KC4 A;  1VB0 A;  1G6M A;  1TGX A;  1ERA A;  1QM7 A;  2H8U A;  2CTX A;  1DRS A;  1COD A;  1NEA A;  4ZQY A;  4FAO C;  1IK8 A;  4IYE A;  1B41 B;  2H7Z A;  3EVS C;  4BIK B;  2I9B E;  2H64 B;  3BT1 U;  2CRT A;  1JE9 A;  1BTE A;  1KBT A;  2CDX A;  2FD6 U;  2PJY C;  1YWH A;  1KXI A;  1TFS A;  2HLQ A; 
#chains in the Genus database with same CATH homology
 2H64 C;  4QTI U;  2MFA A;  3U74 U;  1QKE A;  1H0J A;  1FAS A;  3ERA A;  3KFD I;  1LX5 B;  1KBS A;  1NTN A;  4P7U A;  1CDT A;  1CHV S;  2H62 D;  1MR6 A;  1NYS A;  1LXG A;  1FF4 A;  1NTX A;  2ABX A;  3NEQ A;  1MAH F;  1IKC A;  4EY8 B;  1KFH A;  1I02 A;  1RGJ A;  2BTX A;  1KU6 B;  4LFT A;  2GOO B;  1JBD A;  1BXP A;  1ERG A;  1FSC A;  1HC9 A;  1LJZ A;  2X8B B;  1CB9 A;  1LSI A;  4OM5 A;  1ONJ A;  1ABT A;  1KBA A;  3HH7 A;  2GOO C;  1IDL A;  3U73 U;  1NOR A;  1NYU A;  2K3G A;  1CXN A;  1HAA A;  2UWR A;  2CCX A;  2MJY A;  3BT2 U;  3QB4 B;  1TXA A;  5IMT D;  1CTX A;  1ZAD A;  2H7Z B;  2J8B A;  1CCQ A;  1IQ9 A;  2MUO A;  3FEV A;  2MHY A;  2LCR A;  1CDQ A;  5DO6 A;  1IDH A;  1CRF A;  1L4W A;  1IDG A;  5EBX A;  1HC9 B;  1KTZ B;  3NDS A;  4HQP F;  1CDS A;  2LA1 A;  4BDT B;  3KFD E;  4FAO E;  1CVO A;  1CRE A;  1IDI A;  2H62 C;  2VLW A;  2L5S A;  2MJ4 A;  1QKD A;  2OFS A;  3NH7 A;  4KSN A;  1LXH A;  2QJB C;  1TXB A;  4AEA A;  1IJC A;  1W6B A;  1CDR A;  2L03 A;  3EBX A;  2CRS A;  1M9Z A;  2HLR A;  1HAJ A;  1F94 A;  2PJY B;  1XT3 A;  4RUD A;  2QC1 A;  1KL8 A;  1F8U B;  1FRA A;  2N99 A;  2MUP A;  2QJ9 C;  2H5F A;  2QJA C;  1V6P A;  5DU1 A;  1S4Y A;  2JQP A;  1KS6 A;  1UG4 A;  2JVE A;  6EBX A;  4UY2 C;  4DO8 A;  1ES7 B;  2MJ0 A;  4OM4 A;  2ERA A;  1COE A;  1JGK A;  1FSS B;  1RL5 A;  1HOY A;  1PLO A;  2NBT A;  2UX2 A;  3PLC A;  1CXO A;  1REW C;  4XJJ A;  1NXB A;  3LAQ U;  3VTS A;  5DZ5 A;  5IMY C;  1FFJ A;  2BHI A;  1KC4 A;  1VB0 A;  1G6M A;  1TGX A;  1ERA A;  1QM7 A;  2H8U A;  2CTX A;  1DRS A;  1COD A;  1NEA A;  4ZQY A;  4FAO C;  1IK8 A;  4IYE A;  1B41 B;  2H7Z A;  3EVS C;  4BIK B;  2I9B E;  2H64 B;  3BT1 U;  2CRT A;  1JE9 A;  1BTE A;  1KBT A;  2CDX A;  2FD6 U;  2PJY C;  1YWH A;  1KXI A;  1TFS A;  2HLQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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