2NVQC

Rna polymerase ii elongation complex in 150 mm mg+2 with 2'dutp
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'
publication title Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
pubmed doi rcsb
total genus 53
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2006-11-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2nvqC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2nvqC01
4NOIA 2VUMK 3CQZC 1Y1VC 2NVTK 3S15C 4A3EC 2WB1L 4QIWL 3PO3K 4A3DK 5IYCK 2Y0SD 4BY1C 3S1MK 3S2DK 1Y1WC 4YFNA 3H0GC 3GTOC 1WCMK 2JA7K 4LJZA 2VUMC 2NVYK 1I6VA 3HOYK 4LK0A 1IW7A 2PA8D 4OIRA 4G7OA 4A3DC 1TWCK 1TWHK 3HOVC 5C4XK 3S1MC 3S2DC 3GTQK 1WCMC 3HOYC 4C3HK 4C3JC 4A3JC 1TWCC 1TWHC 3CQZK 5C4XC 3GTGC 1YNNA 3GTMC 3S14K 3GTQC 3S15K 5IYDK 2NVQC 1SFOC 4XLNA 4BXXK 4C3HC 4YFXA 1I6HK 4Q5SA 5IP9C 3H0GK 3HKZL 4YFKA 4BBRC 2B63C 3S14C 1I3QK 5IYDC 4BXXC 3HOVK 2WAQD 2A68A 2JA8C 4Q4ZA 4G7HA 4OIOA 1I6HC 3FKIK 4AYBL 5M5XK 2O5JA 3HOXK 2NVXK 2R93C 3I4NK 2Y0SL 4A3CK 4C3JK 1I3QC 4QJVA 4A3JK 2A6HA 4MEXA 4X6AK 1ZYRA 3GTGK 3GTJC 4OINA 1K83C 2R7ZC 3I4MC 3GTMK 4A3BC 3FKIC 2E2IK 3I4NC 2NVXC 1I50K 3S2HK 3HOXC 1SFOK 4A3CC 2NVQK 4A3KC 4OIQA 5M3FK 5C4JC 5IP9K 2A6EA 3S1QK 1BDFA 4X6AC 4MQ9A 4A3FK 2R92C 4BBRK 2B63K 4JK1A 3HOUC 3HOZC 4BY7C 2E2IC 4A3IK 3S2HC 1I50C 2JA6C 5M5WK 5C3EC 4LLGA 1TWAK 2JA8K 3S1QC 4Y52C 4A3FC 2R93K 1SMYA 4G7ZA 3H3VD 4A3IC 3M4OC 4A93K 4QJVB 4A3BK 2A69A 4KMUA 5C44C 3GTJK 1K83K 2JA5K 2YU9K 1TWAC 3I4MK 2R7ZK 2PMZD 5IP7C 4MEYA 3GTPC 1R9TK 4A3KK 3S17C 4LK1A 4A93C 5C4JK 2E2HK 2E2JK 3WODA 3S16K 2R92K 4ZH4A 2JA5C 4A3LK 1TWFK 2YU9C 2PA8L 1HQMA 3HOUK 3HOZK 4YG2A 4A3MK 3S1NK 3RZDK 1R9TC 4A3GK 4OIPA 4BBSC 2JA6K 4KN4A 5C3EK 5IYBK 3RZOK 2BE5A 2E2HC 2WB1D 2E2JC 4QIWD 3S16C 4KN7A 4Y52K 4A3LC 4C2MK 4Y7NK 1TWFC 3S1NC 3PO2K 3M3YK 3M4OK 4A3MC 3HOWC 3GTKK 3RZDC 3DXJA 4A3GC 4AYBD 5FLMC 1TWGK 5C44K 3K7AK 5IYBC 4XSZA 3RZOC 5IP7K 3EQLA 5TMCA 3GTPK 4C2MC 4Y7NC 3M3YC 3PO2C 1XPPA 3S17K 5M3MK 3GTKC 2NVTC 3S1RK 1TWGC 4XLPA 3K7AC 5IYCC 3GTLK 4BY7K 3H3VL 4C3IK 5FJ8K 3PO3C 2CW0A 2JA7C 4BBSK 5TMFA 2NVYC 2WAQL 2PPBA 2PMZL 3S1RC 1YNJA 5D4DA 2O5IA 3GTLC 1Y1VK 3HOWK 4C3IC 3HKZD 5FLMK 4A3EK 4XSXA 4GZYA 5M5YK 4BY1K 1Y1WK 3GTOK
chains in the Genus database with same CATH superfamily
1VGXA 3LAJA 1Y1WA 4KMDA 4A3EC 4A3DK 3AQOA 4ILDA 2XCRB 1Y1WC 1WCMK 3DLLS 1DD5A 3BUEA 4G7OA 1IS1A 3V4GA 1FEUA 1PJ5A 3N3YA 1XZQA 3HOYC 4KMHA 3TTGA 4C3HK 1B4AA 1C0AA 5C4XC 4WF9S 5CJ9A 2Y3PA 1XXBA 3CAGA 4Q5SA 4WJ4A 3ADAC 2FQTA 4YFKA 2GSOA 3GEHA 5IYDC 3HOVK 1O29A 3GDZA 4AYBL 5JVGS 1XXCA 1O25A 4A3JK 3I4MC 4A3BC 3S2HK 3HOXC 1SFOK 1O28A 5IOSA 5C4JC 5M3FK 5IP9K 1F7VA 3S1QK 2JA6A 1BDFA 4MQ9A 4A3FK 4XCHA 3T01A 3HOUC 2V6SA 1G51A 2JA6C 5DM6S 5M5WK 2JA8K 2R93K 4LQYA 3H3VD 3M4OC 3L4JA 3GEIA 2V6UA 4QJVB 4G0UA 2A69A 2YU9K 1TWAC 2PMZD 2JA5A 3PIOS 5IOQA 4A3KK 3GTLA 4A93C 3GEEA 3WODA 2ZJQS 2JA5C 4A3LK 3S1NK 4BY7K 1HQMA 1DCOA 4PABA 4YG2A 1TWFA 4BBSC 4KN4A 1F7UA 2E2HC 4IO9S 4IOCS 4KN7A 3T00A 1TWFC 1WOSA 3M3YK 3HOWC 3GTKK 1EK8A 3DXJA 1O26A 4GTEA 5C44K 1O24A 3N0CA 3RZOC 3EQLA 3FOEA 4C2MC 5M3MK 1TWGC 2NVYA 1TWCA 5E68A 5FJ8K 1HI9A 2NVYC 4C3IC 5FLMK 3CQZA 4A3EK 4GZYA 5JFEA 3TFJA 1Y1WK 3CQZC 4WFAS 3TFIA 3GTOA 2NVTK 2WB1L 1ZVUA 2VUMA 5JVHS 5IYCK 1I3QA 4YFNA 3GTOC 2JA7K 1J98A 2VUMC 3HOYK 5C4XK 3S1MC 3S2DC 4P5BA 1YCLA 3GTGA 4C3JC 1TWHC 3GTGC 1YNNA 4KARA 4GTBA 3GTQC 3S15K 4KASA 5IYDK 2B63A 1VRQC 3H0GK 2XCOA 3NUHA 2B63C 3S14C 3A8IA 4GTFA 4J3NA 4BXXC 5L46A 1I6HC 4A3BK 2O5JA 3HOXK 1K83A 3GTJA 2R7ZA 3FKIA 3OEPA 4MEXA 1DCHA 3GTJC 1K83C 2R7ZC 3GTMK 3FKIC 3I4NC 2NVQK 3FOFA 1EFWA 4OIQA 2JH3A 4BBRK 3HOZC 5HL8A 1TWAK 4Y52C 4WJ3M 3BP8C 2ZUFA 4A93K 2CFAA 4KMUA 2JA5K 3PIPS 5IP7C 4MEYA 3GSIA 3LYWA 3S17C 1R9TA 2E2HK 2D6FC 2R92K 4ZH4A 4FZBA 4KB2A 1TWFK 5JVOA 2V6TA 1R9TC 1AB4A 1V5VA 5C3EK 3RZOK 2BE5A 2WB1D 2ZJPS 4C2MK 4A3MC 3RZDC 4A3GC 1TWGK 3AQPA 2L5NA 5TMCA 3GTPK 1J6XA 1VLOA 1XZPB 4XLPA 1WSRA 1IBAA 3A8JA 1VJEA 4C3IK 2FQOA 3S1RC 4GFQA 4WCES 5D4DA 4DDQA 2O5IA 3GTLC 2GSNA 5EGHA 1USOA 1Y1VA 5M5YK 1JQWA 5IOTA 3GTOK 3G4CA 2VUMK 1Y1VC 1INNA 2ZJRS 4RMFA 3S1MK 3S2DK 3PO3K 4LJZA 1I6VA 4C45A 1IW7A 2PA8D 1EQRA 1TWHK 3HOVC 1PJ7A 3GTQK 1WQGA 4A3JC 1TWCC 1SFOA 4KATA 3S14K 4BXXK 1SFOC 4XLNA 1JOEA 4YFXA 5CHPA 1I6HK 5IP9C 4BKWA 4G0VA 3BP3A 4M1XA 1WSVA 3G4AA 1EH1A 2R93A 3SZZA 2JA8C 1IE0A 4G7HA 3FKIK 3I4NK 5M5XK 2R93C 1XZQB 2Y0SL 3N0BA 2NVXA 1I3QC 4QJVA 4KM9A 4OINA 2ZUEA 1WIHA 3SZYA 2NVXC 1JVIA 4A3CC 4A3KC 2E2IA 1I50A 2A6EA 1IQ0A 4X6AC 4KC6A 4JK1A 4BY7C 2E2IC 1PJ6A 1I50C 4LLGA 2XCQA 1BS2A 5DM7S 1RU0A 1SMYA 2GSUA 2KXYA 4A3IC 1L0WA 3HXAA 5C44C 3I4MK 4WFBS 2KWAA 1R9TK 4LK1A 1WOPA 5C4JK 3S0XA 2PA8L 3ERED 3HOUK 4KAWX 4A3MK 3RZDK 4A3GK 4OIPA 4GTDA 2JA6K 3T02A 1WQFA 1X31C 2E2JC 4G0WA 3S16C 1XXAA 3AH5A 4P5AA 3M4OK 1F93A 5FLMC 5IYBC 4XSZA 4Y7NC 1XPPA 3PO2C 3VA7A 2NVTC 2JA7A 2GAGC 3S1RK 3AD9C 1B4BA 3K7AC 5IYCC 3GTLK 4KMAA 4BBSK 2CW0A 2JA7C 4LR2A 1ISEA 1ZBSA 2PPBA 4FM9A 2GAHC 1ZQ1C 1J6WA 3LPXA 1Y1VK 3HOWK 3AD7C 1BGWA 1DCPA 2RGRA 5IORA 4KM8A 4NOIA 3H0GA 3CF5S 3S15C 4QIWL 2Y0SD 4BY1C 4IOAS 4GTCA 1KQ4A 3H0GC 1UV7A 3AD8C 2NVYK 4LK0A 4BLAA 4OIRA 1WCMA 4A3DC 1TWCK 4KDDA 4P9SA 1WCMC 3GTMA 4BLBA 3JSTA 3CQZK 1USMA 1O2AA 3GTMC 4GT9A 1BJTA 2NVQC 3FHZA 3IPJA 4C3HC 3QX3A 4AH6A 5HQHA 3HKZL 5TJ3A 1TWAA 4BBRC 1I3QK 1VH2A 2WAQD 1WORA 2A68A 1IL2A 4Q4ZA 4OIOA 1EI6A 2NVXK 1O27A 4A3CK 4WILA 4C3JK 2A6HA 4X6AK 1ZYRA 3GTGK 2E2HA 2E2IK 1I50K 2R92A 3L4KA 3Q3QA 1GE9A 4PAAA 3GIRA 1O2BA 2R92C 2B63K 4A3IK 3S2HC 5C3EC 3S1QC 1TWGA 4A3FC 4O2DA 1J6VA 4G7ZA 2ZFZA 3GTPA 4GTLA 2PHCB 1K83K 3GTJK 2R7ZK 3GTPC 2YU9A 1YX2A 2RH6A 1XZPA 2E2JK 3S16K 2YU9C 3HOZK 3MMLB 4U67S 5EGEA 2P8TA 5IYBK 3OPFA 4Y52K 5HL7S 4QIWD 2KQ1A 4A3LC 4LOWA 4GTAA 4Y7NK 3S1NC 1WQHA 3PO2K 1WOOA 3A8KA 4AYBD 2CFAB 3GTKA 3K7AK 3OREA 5IP7K 3TFHA 3M3YC 3S17K 2L3UA 3GTKC 2P5MA 1ZXOA 3LAPA 2W7VA 3H3VL 1TWHA 3PO3C 5TMFA 2EBBA 2WAQL 3GTQA 2PMZL 1YNJA 4KB4A 1O2FB 4WFNS 3HKZD 2KPUA 4XSXA 1F9NA 4BY1K
chains in the Genus database with same CATH topology
4NOIA 2VUMK 3CQZC 1Y1VC 2NVTK 3S15C 4A3EC 2WB1L 4QIWL 3PO3K 4A3DK 5IYCK 2Y0SD 4BY1C 3S1MK 3S2DK 1Y1WC 4YFNA 3H0GC 3GTOC 1WCMK 2JA7K 4LJZA 2VUMC 2NVYK 1I6VA 3HOYK 4LK0A 1IW7A 2PA8D 4OIRA 4G7OA 4A3DC 1TWCK 1TWHK 3HOVC 5C4XK 3S1MC 3S2DC 3GTQK 1WCMC 3HOYC 4C3HK 4C3JC 4A3JC 1TWCC 1TWHC 3CQZK 5C4XC 3GTGC 1YNNA 3GTMC 3S14K 3GTQC 3S15K 5IYDK 2NVQC 1SFOC 4XLNA 4BXXK 4C3HC 4YFXA 1I6HK 4Q5SA 5IP9C 3H0GK 3HKZL 4YFKA 4BBRC 2B63C 3S14C 1I3QK 5IYDC 4BXXC 3HOVK 2WAQD 2A68A 2JA8C 4Q4ZA 4G7HA 4OIOA 1I6HC 3FKIK 4AYBL 5M5XK 2O5JA 3HOXK 2NVXK 2R93C 3I4NK 2Y0SL 4A3CK 4C3JK 1I3QC 4QJVA 4A3JK 2A6HA 4MEXA 4X6AK 1ZYRA 3GTGK 3GTJC 4OINA 1K83C 2R7ZC 3I4MC 3GTMK 4A3BC 3FKIC 2E2IK 3I4NC 2NVXC 1I50K 3S2HK 3HOXC 1SFOK 4A3CC 2NVQK 4A3KC 4OIQA 5M3FK 5C4JC 5IP9K 2A6EA 3S1QK 1BDFA 4X6AC 4MQ9A 4A3FK 2R92C 4BBRK 2B63K 4JK1A 3HOUC 3HOZC 4BY7C 2E2IC 4A3IK 3S2HC 1I50C 2JA6C 5M5WK 5C3EC 4LLGA 1TWAK 2JA8K 3S1QC 4Y52C 4A3FC 2R93K 1SMYA 4G7ZA 3H3VD 4A3IC 3M4OC 4A93K 4QJVB 4A3BK 2A69A 4KMUA 5C44C 3GTJK 1K83K 2JA5K 2YU9K 1TWAC 3I4MK 2R7ZK 2PMZD 5IP7C 4MEYA 3GTPC 1R9TK 4A3KK 3S17C 4LK1A 4A93C 5C4JK 2E2HK 2E2JK 3WODA 3S16K 2R92K 4ZH4A 2JA5C 4A3LK 1TWFK 2YU9C 2PA8L 1HQMA 3HOUK 3HOZK 4YG2A 4A3MK 3S1NK 3RZDK 1R9TC 4A3GK 4OIPA 4BBSC 2JA6K 4KN4A 5C3EK 5IYBK 3RZOK 2BE5A 2E2HC 2WB1D 2E2JC 4QIWD 3S16C 4KN7A 4Y52K 4A3LC 4C2MK 4Y7NK 1TWFC 3S1NC 3PO2K 3M3YK 3M4OK 4A3MC 3HOWC 3GTKK 3RZDC 3DXJA 4A3GC 4AYBD 5FLMC 1TWGK 5C44K 3K7AK 5IYBC 4XSZA 3RZOC 5IP7K 3EQLA 5TMCA 3GTPK 4C2MC 4Y7NC 3M3YC 3PO2C 1XPPA 3S17K 5M3MK 3GTKC 2NVTC 3S1RK 1TWGC 4XLPA 3K7AC 5IYCC 3GTLK 4BY7K 3H3VL 4C3IK 5FJ8K 3PO3C 2CW0A 2JA7C 4BBSK 5TMFA 2NVYC 2WAQL 2PPBA 2PMZL 3S1RC 1YNJA 5D4DA 2O5IA 3GTLC 1Y1VK 3HOWK 4C3IC 3HKZD 5FLMK 4A3EK 4XSXA 4GZYA 5M5YK 4BY1K 1Y1WK 3GTOK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NOI A;  2VUM K;  3CQZ C;  1Y1V C;  2NVT K;  3S15 C;  4A3E C;  2WB1 L;  4QIW L;  3PO3 K;  4A3D K;  5IYC K;  2Y0S D;  4BY1 C;  3S1M K;  3S2D K;  1Y1W C;  4YFN A;  3H0G C;  3GTO C;  1WCM K;  2JA7 K;  4LJZ A;  2VUM C;  2NVY K;  1I6V A;  3HOY K;  4LK0 A;  1IW7 A;  2PA8 D;  4OIR A;  4G7O A;  4A3D C;  1TWC K;  1TWH K;  3HOV C;  5C4X K;  3S1M C;  3S2D C;  3GTQ K;  1WCM C;  3HOY C;  4C3H K;  4C3J C;  4A3J C;  1TWC C;  1TWH C;  3CQZ K;  5C4X C;  3GTG C;  1YNN A;  3GTM C;  3S14 K;  3GTQ C;  3S15 K;  5IYD K;  2NVQ C;  1SFO C;  4XLN A;  4BXX K;  4C3H C;  4YFX A;  1I6H K;  4Q5S A;  5IP9 C;  3H0G K;  3HKZ L;  4YFK A;  4BBR C;  2B63 C;  3S14 C;  1I3Q K;  5IYD C;  4BXX C;  3HOV K;  2WAQ D;  2A68 A;  2JA8 C;  4Q4Z A;  4G7H A;  4OIO A;  1I6H C;  3FKI K;  4AYB L;  5M5X K;  2O5J A;  3HOX K;  2NVX K;  2R93 C;  3I4N K;  2Y0S L;  4A3C K;  4C3J K;  1I3Q C;  4QJV A;  4A3J K;  2A6H A;  4MEX A;  4X6A K;  1ZYR A;  3GTG K;  3GTJ C;  4OIN A;  1K83 C;  2R7Z C;  3I4M C;  3GTM K;  4A3B C;  3FKI C;  2E2I K;  3I4N C;  2NVX C;  1I50 K;  3S2H K;  3HOX C;  1SFO K;  4A3C C;  2NVQ K;  4A3K C;  4OIQ A;  5M3F K;  5C4J C;  5IP9 K;  2A6E A;  3S1Q K;  1BDF A;  4X6A C;  4MQ9 A;  4A3F K;  2R92 C;  4BBR K;  2B63 K;  4JK1 A;  3HOU C;  3HOZ C;  4BY7 C;  2E2I C;  4A3I K;  3S2H C;  1I50 C;  2JA6 C;  5M5W K;  5C3E C;  4LLG A;  1TWA K;  2JA8 K;  3S1Q C;  4Y52 C;  4A3F C;  2R93 K;  1SMY A;  4G7Z A;  3H3V D;  4A3I C;  3M4O C;  4A93 K;  4QJV B;  4A3B K;  2A69 A;  4KMU A;  5C44 C;  3GTJ K;  1K83 K;  2JA5 K;  2YU9 K;  1TWA C;  3I4M K;  2R7Z K;  2PMZ D;  5IP7 C;  4MEY A;  3GTP C;  1R9T K;  4A3K K;  3S17 C;  4LK1 A;  4A93 C;  5C4J K;  2E2H K;  2E2J K;  3WOD A;  3S16 K;  2R92 K;  4ZH4 A;  2JA5 C;  4A3L K;  1TWF K;  2YU9 C;  2PA8 L;  1HQM A;  3HOU K;  3HOZ K;  4YG2 A;  4A3M K;  3S1N K;  3RZD K;  1R9T C;  4A3G K;  4OIP A;  4BBS C;  2JA6 K;  4KN4 A;  5C3E K;  5IYB K;  3RZO K;  2BE5 A;  2E2H C;  2WB1 D;  2E2J C;  4QIW D;  3S16 C;  4KN7 A;  4Y52 K;  4A3L C;  4C2M K;  4Y7N K;  1TWF C;  3S1N C;  3PO2 K;  3M3Y K;  3M4O K;  4A3M C;  3HOW C;  3GTK K;  3RZD C;  3DXJ A;  4A3G C;  4AYB D;  5FLM C;  1TWG K;  5C44 K;  3K7A K;  5IYB C;  4XSZ A;  3RZO C;  5IP7 K;  3EQL A;  5TMC A;  3GTP K;  4C2M C;  4Y7N C;  3M3Y C;  3PO2 C;  1XPP A;  3S17 K;  5M3M K;  3GTK C;  2NVT C;  3S1R K;  1TWG C;  4XLP A;  3K7A C;  5IYC C;  3GTL K;  4BY7 K;  3H3V L;  4C3I K;  5FJ8 K;  3PO3 C;  2CW0 A;  2JA7 C;  4BBS K;  5TMF A;  2NVY C;  2WAQ L;  2PPB A;  2PMZ L;  3S1R C;  1YNJ A;  5D4D A;  2O5I A;  3GTL C;  1Y1V K;  3HOW K;  4C3I C;  3HKZ D;  5FLM K;  4A3E K;  4XSX A;  4GZY A;  5M5Y K;  4BY1 K;  1Y1W K;  3GTO K; 
#chains in the Genus database with same CATH topology
 1VGX A;  3LAJ A;  1Y1W A;  4KMD A;  4A3E C;  4A3D K;  3AQO A;  4ILD A;  2XCR B;  1Y1W C;  1WCM K;  3DLL S;  1DD5 A;  3BUE A;  4G7O A;  1IS1 A;  3V4G A;  1FEU A;  1PJ5 A;  3N3Y A;  1XZQ A;  3HOY C;  4KMH A;  3TTG A;  4C3H K;  1B4A A;  1C0A A;  5C4X C;  4WF9 S;  5CJ9 A;  2Y3P A;  1XXB A;  3CAG A;  4Q5S A;  4WJ4 A;  3ADA C;  2FQT A;  4YFK A;  2GSO A;  3GEH A;  5IYD C;  3HOV K;  1O29 A;  3GDZ A;  4AYB L;  5JVG S;  1XXC A;  1O25 A;  4A3J K;  3I4M C;  4A3B C;  3S2H K;  3HOX C;  1SFO K;  1O28 A;  5IOS A;  5C4J C;  5M3F K;  5IP9 K;  1F7V A;  3S1Q K;  2JA6 A;  1BDF A;  4MQ9 A;  4A3F K;  4XCH A;  3T01 A;  3HOU C;  2V6S A;  1G51 A;  2JA6 C;  5DM6 S;  5M5W K;  2JA8 K;  2R93 K;  4LQY A;  3H3V D;  3M4O C;  3L4J A;  3GEI A;  2V6U A;  4QJV B;  4G0U A;  2A69 A;  2YU9 K;  1TWA C;  2PMZ D;  2JA5 A;  3PIO S;  5IOQ A;  4A3K K;  3GTL A;  4A93 C;  3GEE A;  3WOD A;  2ZJQ S;  2JA5 C;  4A3L K;  3S1N K;  4BY7 K;  1HQM A;  1DCO A;  4PAB A;  4YG2 A;  1TWF A;  4BBS C;  4KN4 A;  1F7U A;  2E2H C;  4IO9 S;  4IOC S;  4KN7 A;  3T00 A;  1TWF C;  1WOS A;  3M3Y K;  3HOW C;  3GTK K;  1EK8 A;  3DXJ A;  1O26 A;  4GTE A;  5C44 K;  1O24 A;  3N0C A;  3RZO C;  3EQL A;  3FOE A;  4C2M C;  5M3M K;  1TWG C;  2NVY A;  1TWC A;  5E68 A;  5FJ8 K;  1HI9 A;  2NVY C;  4C3I C;  5FLM K;  3CQZ A;  4A3E K;  4GZY A;  5JFE A;  3TFJ A;  1Y1W K;  3CQZ C;  4WFA S;  3TFI A;  3GTO A;  2NVT K;  2WB1 L;  1ZVU A;  2VUM A;  5JVH S;  5IYC K;  1I3Q A;  4YFN A;  3GTO C;  2JA7 K;  1J98 A;  2VUM C;  3HOY K;  5C4X K;  3S1M C;  3S2D C;  4P5B A;  1YCL A;  3GTG A;  4C3J C;  1TWH C;  3GTG C;  1YNN A;  4KAR A;  4GTB A;  3GTQ C;  3S15 K;  4KAS A;  5IYD K;  2B63 A;  1VRQ C;  3H0G K;  2XCO A;  3NUH A;  2B63 C;  3S14 C;  3A8I A;  4GTF A;  4J3N A;  4BXX C;  5L46 A;  1I6H C;  4A3B K;  2O5J A;  3HOX K;  1K83 A;  3GTJ A;  2R7Z A;  3FKI A;  3OEP A;  4MEX A;  1DCH A;  3GTJ C;  1K83 C;  2R7Z C;  3GTM K;  3FKI C;  3I4N C;  2NVQ K;  3FOF A;  1EFW A;  4OIQ A;  2JH3 A;  4BBR K;  3HOZ C;  5HL8 A;  1TWA K;  4Y52 C;  4WJ3 M;  3BP8 C;  2ZUF A;  4A93 K;  2CFA A;  4KMU A;  2JA5 K;  3PIP S;  5IP7 C;  4MEY A;  3GSI A;  3LYW A;  3S17 C;  1R9T A;  2E2H K;  2D6F C;  2R92 K;  4ZH4 A;  4FZB A;  4KB2 A;  1TWF K;  5JVO A;  2V6T A;  1R9T C;  1AB4 A;  1V5V A;  5C3E K;  3RZO K;  2BE5 A;  2WB1 D;  2ZJP S;  4C2M K;  4A3M C;  3RZD C;  4A3G C;  1TWG K;  3AQP A;  2L5N A;  5TMC A;  3GTP K;  1J6X A;  1VLO A;  1XZP B;  4XLP A;  1WSR A;  1IBA A;  3A8J A;  1VJE A;  4C3I K;  2FQO A;  3S1R C;  4GFQ A;  4WCE S;  5D4D A;  4DDQ A;  2O5I A;  3GTL C;  2GSN A;  5EGH A;  1USO A;  1Y1V A;  5M5Y K;  1JQW A;  5IOT A;  3GTO K;  3G4C A;  2VUM K;  1Y1V C;  1INN A;  2ZJR S;  4RMF A;  3S1M K;  3S2D K;  3PO3 K;  4LJZ A;  1I6V A;  4C45 A;  1IW7 A;  2PA8 D;  1EQR A;  1TWH K;  3HOV C;  1PJ7 A;  3GTQ K;  1WQG A;  4A3J C;  1TWC C;  1SFO A;  4KAT A;  3S14 K;  4BXX K;  1SFO C;  4XLN A;  1JOE A;  4YFX A;  5CHP A;  1I6H K;  5IP9 C;  4BKW A;  4G0V A;  3BP3 A;  4M1X A;  1WSV A;  3G4A A;  1EH1 A;  2R93 A;  3SZZ A;  2JA8 C;  1IE0 A;  4G7H A;  3FKI K;  3I4N K;  5M5X K;  2R93 C;  1XZQ B;  2Y0S L;  3N0B A;  2NVX A;  1I3Q C;  4QJV A;  4KM9 A;  4OIN A;  2ZUE A;  1WIH A;  3SZY A;  2NVX C;  1JVI A;  4A3C C;  4A3K C;  2E2I A;  1I50 A;  2A6E A;  1IQ0 A;  4X6A C;  4KC6 A;  4JK1 A;  4BY7 C;  2E2I C;  1PJ6 A;  1I50 C;  4LLG A;  2XCQ A;  1BS2 A;  5DM7 S;  1RU0 A;  1SMY A;  2GSU A;  2KXY A;  4A3I C;  1L0W A;  3HXA A;  5C44 C;  3I4M K;  4WFB S;  2KWA A;  1R9T K;  4LK1 A;  1WOP A;  5C4J K;  3S0X A;  2PA8 L;  3ERE D;  3HOU K;  4KAW X;  4A3M K;  3RZD K;  4A3G K;  4OIP A;  4GTD A;  2JA6 K;  3T02 A;  1WQF A;  1X31 C;  2E2J C;  4G0W A;  3S16 C;  1XXA A;  3AH5 A;  4P5A A;  3M4O K;  1F93 A;  5FLM C;  5IYB C;  4XSZ A;  4Y7N C;  1XPP A;  3PO2 C;  3VA7 A;  2NVT C;  2JA7 A;  2GAG C;  3S1R K;  3AD9 C;  1B4B A;  3K7A C;  5IYC C;  3GTL K;  4KMA A;  4BBS K;  2CW0 A;  2JA7 C;  4LR2 A;  1ISE A;  1ZBS A;  2PPB A;  4FM9 A;  2GAH C;  1ZQ1 C;  1J6W A;  3LPX A;  1Y1V K;  3HOW K;  3AD7 C;  1BGW A;  1DCP A;  2RGR A;  5IOR A;  4KM8 A;  4NOI A;  3H0G A;  3CF5 S;  3S15 C;  4QIW L;  2Y0S D;  4BY1 C;  4IOA S;  4GTC A;  1KQ4 A;  3H0G C;  1UV7 A;  3AD8 C;  2NVY K;  4LK0 A;  4BLA A;  4OIR A;  1WCM A;  4A3D C;  1TWC K;  4KDD A;  4P9S A;  1WCM C;  3GTM A;  4BLB A;  3JST A;  3CQZ K;  1USM A;  1O2A A;  3GTM C;  4GT9 A;  1BJT A;  2NVQ C;  3FHZ A;  3IPJ A;  4C3H C;  3QX3 A;  4AH6 A;  5HQH A;  3HKZ L;  5TJ3 A;  1TWA A;  4BBR C;  1I3Q K;  1VH2 A;  2WAQ D;  1WOR A;  2A68 A;  1IL2 A;  4Q4Z A;  4OIO A;  1EI6 A;  2NVX K;  1O27 A;  4A3C K;  4WIL A;  4C3J K;  2A6H A;  4X6A K;  1ZYR A;  3GTG K;  2E2H A;  2E2I K;  1I50 K;  2R92 A;  3L4K A;  3Q3Q A;  1GE9 A;  4PAA A;  3GIR A;  1O2B A;  2R92 C;  2B63 K;  4A3I K;  3S2H C;  5C3E C;  3S1Q C;  1TWG A;  4A3F C;  4O2D A;  1J6V A;  4G7Z A;  2ZFZ A;  3GTP A;  4GTL A;  2PHC B;  1K83 K;  3GTJ K;  2R7Z K;  3GTP C;  2YU9 A;  1YX2 A;  2RH6 A;  1XZP A;  2E2J K;  3S16 K;  2YU9 C;  3HOZ K;  3MML B;  4U67 S;  5EGE A;  2P8T A;  5IYB K;  3OPF A;  4Y52 K;  5HL7 S;  4QIW D;  2KQ1 A;  4A3L C;  4LOW A;  4GTA A;  4Y7N K;  3S1N C;  1WQH A;  3PO2 K;  1WOO A;  3A8K A;  4AYB D;  2CFA B;  3GTK A;  3K7A K;  3ORE A;  5IP7 K;  3TFH A;  3M3Y C;  3S17 K;  2L3U A;  3GTK C;  2P5M A;  1ZXO A;  3LAP A;  2W7V A;  3H3V L;  1TWH A;  3PO3 C;  5TMF A;  2EBB A;  2WAQ L;  3GTQ A;  2PMZ L;  1YNJ A;  4KB4 A;  1O2F B;  4WFN S;  3HKZ D;  2KPU A;  4XSX A;  1F9N A;  4BY1 K; 
#chains in the Genus database with same CATH homology
 4NOI A;  2VUM K;  3CQZ C;  1Y1V C;  2NVT K;  3S15 C;  4A3E C;  2WB1 L;  4QIW L;  3PO3 K;  4A3D K;  5IYC K;  2Y0S D;  4BY1 C;  3S1M K;  3S2D K;  1Y1W C;  4YFN A;  3H0G C;  3GTO C;  1WCM K;  2JA7 K;  4LJZ A;  2VUM C;  2NVY K;  1I6V A;  3HOY K;  4LK0 A;  1IW7 A;  2PA8 D;  4OIR A;  4G7O A;  4A3D C;  1TWC K;  1TWH K;  3HOV C;  5C4X K;  3S1M C;  3S2D C;  3GTQ K;  1WCM C;  3HOY C;  4C3H K;  4C3J C;  4A3J C;  1TWC C;  1TWH C;  3CQZ K;  5C4X C;  3GTG C;  1YNN A;  3GTM C;  3S14 K;  3GTQ C;  3S15 K;  5IYD K;  2NVQ C;  1SFO C;  4XLN A;  4BXX K;  4C3H C;  4YFX A;  1I6H K;  4Q5S A;  5IP9 C;  3H0G K;  3HKZ L;  4YFK A;  4BBR C;  2B63 C;  3S14 C;  1I3Q K;  5IYD C;  4BXX C;  3HOV K;  2WAQ D;  2A68 A;  2JA8 C;  4Q4Z A;  4G7H A;  4OIO A;  1I6H C;  3FKI K;  4AYB L;  5M5X K;  2O5J A;  3HOX K;  2NVX K;  2R93 C;  3I4N K;  2Y0S L;  4A3C K;  4C3J K;  1I3Q C;  4QJV A;  4A3J K;  2A6H A;  4MEX A;  4X6A K;  1ZYR A;  3GTG K;  3GTJ C;  4OIN A;  1K83 C;  2R7Z C;  3I4M C;  3GTM K;  4A3B C;  3FKI C;  2E2I K;  3I4N C;  2NVX C;  1I50 K;  3S2H K;  3HOX C;  1SFO K;  4A3C C;  2NVQ K;  4A3K C;  4OIQ A;  5M3F K;  5C4J C;  5IP9 K;  2A6E A;  3S1Q K;  1BDF A;  4X6A C;  4MQ9 A;  4A3F K;  2R92 C;  4BBR K;  2B63 K;  4JK1 A;  3HOU C;  3HOZ C;  4BY7 C;  2E2I C;  4A3I K;  3S2H C;  1I50 C;  2JA6 C;  5M5W K;  5C3E C;  4LLG A;  1TWA K;  2JA8 K;  3S1Q C;  4Y52 C;  4A3F C;  2R93 K;  1SMY A;  4G7Z A;  3H3V D;  4A3I C;  3M4O C;  4A93 K;  4QJV B;  4A3B K;  2A69 A;  4KMU A;  5C44 C;  3GTJ K;  1K83 K;  2JA5 K;  2YU9 K;  1TWA C;  3I4M K;  2R7Z K;  2PMZ D;  5IP7 C;  4MEY A;  3GTP C;  1R9T K;  4A3K K;  3S17 C;  4LK1 A;  4A93 C;  5C4J K;  2E2H K;  2E2J K;  3WOD A;  3S16 K;  2R92 K;  4ZH4 A;  2JA5 C;  4A3L K;  1TWF K;  2YU9 C;  2PA8 L;  1HQM A;  3HOU K;  3HOZ K;  4YG2 A;  4A3M K;  3S1N K;  3RZD K;  1R9T C;  4A3G K;  4OIP A;  4BBS C;  2JA6 K;  4KN4 A;  5C3E K;  5IYB K;  3RZO K;  2BE5 A;  2E2H C;  2WB1 D;  2E2J C;  4QIW D;  3S16 C;  4KN7 A;  4Y52 K;  4A3L C;  4C2M K;  4Y7N K;  1TWF C;  3S1N C;  3PO2 K;  3M3Y K;  3M4O K;  4A3M C;  3HOW C;  3GTK K;  3RZD C;  3DXJ A;  4A3G C;  4AYB D;  5FLM C;  1TWG K;  5C44 K;  3K7A K;  5IYB C;  4XSZ A;  3RZO C;  5IP7 K;  3EQL A;  5TMC A;  3GTP K;  4C2M C;  4Y7N C;  3M3Y C;  3PO2 C;  1XPP A;  3S17 K;  5M3M K;  3GTK C;  2NVT C;  3S1R K;  1TWG C;  4XLP A;  3K7A C;  5IYC C;  3GTL K;  4BY7 K;  3H3V L;  4C3I K;  5FJ8 K;  3PO3 C;  2CW0 A;  2JA7 C;  4BBS K;  5TMF A;  2NVY C;  2WAQ L;  2PPB A;  2PMZ L;  3S1R C;  1YNJ A;  5D4D A;  2O5I A;  3GTL C;  1Y1V K;  3HOW K;  4C3I C;  3HKZ D;  5FLM K;  4A3E K;  4XSX A;  4GZY A;  5M5Y K;  4BY1 K;  1Y1W K;  3GTO K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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