2O5JD

Crystal structure of the t. thermophilus rnap polymerase elongation complex with the ntp substrate analog
Total Genus 275
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
275
sequence length
1504
structure length
1264
Chain Sequence
KKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFASILVVKARVYPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKKGAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELIQLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETTEKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVDVTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGVCQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARKEAVEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase/dna-rna hybrid
molecule keywords 5'-D(P*CP*CP*CP*TP*GP*TP*CP*TP*GP*GP*CP*GP*TP*TP*CP*GP*CP*GP
publication title Structural basis for substrate loading in bacterial RNA polymerase.
pubmed doi rcsb
total genus 275
structure length 1264
sequence length 1504
chains with identical sequence N
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2006-12-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2
D PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3
D PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1
D PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5
D PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.132.30 Mainly Alpha Orthogonal Bundle Topoisomerase I; Chain A, domain 4 Topoisomerase I; Chain A, domain 4 2o5jD05
1.10.274.100 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2o5jD04
2.20.28.170 Mainly Beta Single Sheet Rubrerythrin, domain 2 Rubrerythrin, domain 2 2o5jD07
2.40.40.70 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 2o5jD03
1TWAA 2R92A 3CQZA 2BE5D 2NVXA 1YNND 2NVYA 3FKIA 1I3QA 3GTGA 2E2HA 2O5JD 1R9TA 3GTPA 1TWGA 3H0GA 2R93A 1TWHA 2PMZA 1IW7D 1I6VD 1Y1VA 3GTOA 1Y1WA 4AYBA 3GTJA 2JA5A 2CW0D 1HQMD 2WAQA 2E2IA 3HKZA 4QIWA 2A69D 1SMYD 1YNJD 2A6HD 2Y0SA 3GTKA 3GTQA 2JA7A 1TWCA 2JA6A 1ZYRD 4C2MA 3GTMA 2YU9A 2R7ZA 2B63A 2A68D 1TWFA 2VUMA 2A6ED 1WCMA 1SFOA 1K83A 2WB1A 3GTLA 1I50A
chains in the Genus database with same CATH superfamily
3CQZL 4A3LL 5DM71 2IV2X 1K4TA 2RFKB 5GM9A 4TPUA 1RDGA 1VZGA 4JP7A 5GLYA 4V196 1PFWA 5IYDL 1R0IA 1SEUA 3HKZA 3ML1A 4V2QA 3K7AL 5MF6A 4AHYA 5M5XL 2JA7L 5FTMA 1BW4A 3RYGA 3S1ML 1EJ9A 3VPBE 5DYIA 5T5ID 3X2IA 3PIP1 2PJJA 2K2DA 4IP9A 2V3VA 5C4JL 1PQFA 1S3SA 4FERA 5EIOC 1G8JA 5DYGA 1B2JA 5M3ML 3LWPB 1TWAL 2R92A 3EZAA 1YV1A 5C4XL 1WLFA 3FDJA 2NVXA 4BAAA 1I3QL 2VK9A 2E2HL 3SUMA 2PVEA 1YUZA 2HCZX 2PICA 2X0PA 2WB1P 5H4UA 2PMZA 7RXNA 1S24A 4D3YA 2KN9A 2E2IA 1ZRPA 3GTKL 2JA6L 1OWCA 1PFVA 2Y0NA 1WJVA 2APOB 1WQHA 1RYQA 4BY1L 1T6PA 2YIIA 2AYJA 1PT1A 2ERSA 3S14L 4LMOA 1CZ5A 3J7Z1 5IYCL 3IR6A 3H9CA 2CKAA 1YNND 1SIWA 1EH1A 2PI8A 5IP7L 4RXNA 3WWNB 4AR4A 1AW8B 3HOVL 1Y1VA 1LTLA 3S17L 5C9HA 2C45A 4AHZA 3IAYA 2E7ZA 4A3EL 1E61A 3X2NA 2LPJA 4BY7L 3HU2A 4FXDA 1SMUA 1S30A 4KDDA 1R7RA 1FHMA 3SJRA 1FHHA 3QQ7A 1VZIA 3ZG6A 3RZOL 1SMWA 1DMSA 3HAXC 1E32A 2JIQA 2XJUA 4ZN1B 5C44L 4A3ML 4JP6A 1I6VD 4KAWX 3LR2A 5GLFA 1RB9A 4JADA 2NYAA 1NXEA 4QIWA 1ISEA 3H97A 2Y0SA 1CR5A 2JIOA 1SMMA 1T6JA 4ZM7A 2JA6A 3H99A 1ZYRD 1UHDA 4KDIA 4JLRC 2XJPA 3O5AA 5T5MD 5GAEc 2B63A 3LHPS 2K3OA 4YWLA 1BRFA 5JSBB 1EU1A 2JIRA 3DU6A 3NZ4A 2R92L 3QC8A 3SUJA 1CADA 2PSMC 4L8IA 3LRDA 2MQAA 1T9QA 2NVXL 1H0HA 1PQEA 4POGA 1CZ4A 3K57A 2XJQA 2KKDA 4X6AL 4C3HL 1YUXA 3MPSA 4U671 3X2OA 2E2IL 1F4LA 2EY4E 3PWFA 4A3BL 3MAQA 1PZXA 5AN9H 1N10A 2MP0A 5FTNA 2XJRA 1R0HA 3B0AB 6RXNA 2Z3QB 1Z92B 2WB1A 4QIWP 1I50A 4JAFA 4GS7D 2Y0SP 3MSUA 4YWMA 1E5VA 4KC6A 1QQTA 3PKIA 1R0FA 3P9AA 2KQAA 1A36A 1A35A 1Y1VL 1Y1WA 2NVQL 3QQCE 4FBSA 2N1DB 4A3FL 2JI1A 4C2M1 1JYBA 3SS2A 1IU6A 4WFN1 4A3DL 2NAPA 1T9PA 4AI2A 3K5NA 1GE9A 3EZEA 2GMGA 2MS3A 2H12A 1FDOA 3U44A 3HOWL 4A3CL 1E60A 1QCSA 4BBRL 1KQGA 3HOYL 1NH3A 5MLC3 2E2JL 5C3EL 3GTOA 2N3EA 4AYBA 4NOKA 3LWVB 4BXXL 3HOUL 2CW0D 2EEOB 1AA6A 1EZAA 2M4VA 3KYXA 5M5YL 3K5MA 3X2LA 5M5WL 1Y5IA 1H5NA 2B63L 2R7ZA 2ENGA 4KDLA 1V9MA 1WCMA 1B13A 2VPYA 1C09A 4AONB 3J7Y1 3PO2L 2AQLA 1P7PA 3ENGA 3LWOB 4JS7A 4AHWA 3U4QA 4C6GA 3B08B 3HOZL 1YLEA 3X2JA 4AZDA 1B71A 5H1Sc 2K3NA 2MX9A 2V3BB 2A69D 4B8CD 4H3TA 1TMOA 3D30A 5IP9L 1ZYMA 3HJWB 2GAEA 1RDVA 4IP8A 2YU9A 3LNLA 1Y4ZA 4AYBP 4A3IL 1K4SA 1QDNA 1SFOA 1I50L 1I6HL 2EZBA 2FIPA 2K3QA 2V0FA 1W27A 5IZ2A 3RZTA 4XXBB 1R9TA 3LPEB 3PZAA 1KQFA 1TWGA 3H0GA 1E8JA 4K9FA 4UY81 4AOKB 2FIOA 3P2AA 1Y1WL 3HU1A 1PYQA 3SULA 2R4GA 2EZCA 3H9BA 3PLXB 3S1NL 2JA8L 5DM61 1E18A 2AQCA 4KO8A 4KODA 3K5LA 4AR6A 1MIUA 1Q8IA 2A6HD 4CQ5A 3KYLA 4Y52L 1BW3A 4LHNA 4AAYA 1K83A 3K59A 1TGOA 2DMRA 1R5ZA 3PL5A 3DMRA 2F5JA 1WC2A 4ZN3B 2V45A 4KLNA 5C18A 1VC3B 3LF9A 4NOLA 3S16L 4Y7NL 1TWHA 2HROA 5FJ8L 3H3VM 3GTOL 3X2PA 4AR5A 4KB2A 3SUKA 1OWBA 1LKPA 1RWDA 1YK4A 2XJSA 3S2HL 1PT0A 1RRJA 1QYBA 4CRZA 3M4OL 1ZC1A 4BABA 1NXGA 3KYUA 4C5RA 1R0GA 2R7ZL 4CEIA 3S2DL 3GTMA 1HD5A 2PPTA 3EZBA 1WCML 2DSXA 2LPIA 3HOXL 3LWRB 3S1QL 2PJHB 4A3JL 4FFTA 3X2GA 3X2MA 4BBSL 1EZBA 1FDIA 4GA5A 2LTHA 1LKOA 4C3IL 3GTGA 2NVYA 2QL0A 4AI0A 2JI2A 2B9SB 3GTPA 2X0OA 1IROA 2EZAA 1VCXA 1S2ZA 5CQGA 3S1RL 4CRYG 1IRNA 1PYUB 2B5ID 1R27A 3GTJA 2WAQA 5AI3A 3OUGA 3QQ8A 1PQHA 5EPPA 5M3FL 2PYAA 4A3GL 3X2KA 1DMRA 4JAEA 3GTQA 2L0ZA 1TWCA 4E6YA 2M4YA 3IR5A 2HWGA 1Q16A 4CEHA 1PFYA 2YU9L 4NOHA 3QVDA 4FG2A 1A31A 1TWFA 1YK5A 1L8FA 2VUMA 5MFZA 1SFOL 2G5DA 4D3ZA 2C6BA 2JIMA 5MFPA 3RZDL 2NVTL 2CKCA 5FLML 5AI2A 4FYDA 1B2OA 1OA7A 4EJ3A 1R9TL 1TWGL 3H0GL 2Z3RB 2PNWA 3M3GA 4Q5VA 2X0QA 4Q5GA 2XJTA 4C3JL 1UHEA 3JR7A 3RZ6A 3TIWA 3LR6A 3KYVA 1H7VA 3KYWA 1SMYD 2AUSB 2JIPA 4GA6A 3MQKB 2MX8A 1BE7A 3CF2A 3HJYB 4AR3A 1OGYA 2A6ED 4AHCA 1K83L 2WAQP 5FTLA 4ME3A 4CS0A 1IS1A 4AI3A 1NNQA 2F4QA 1ODHA 4JCWA 4DMRA 3FKIA 3K58A 3A44A 4JJOA 2C6AA 5FTKA 3I4NL 1TWHL 3HU3A 2R93A 2LYIA 2VPZA 4F3EA 2JA5A 1LPQA 5GAHc 1YNJD 1RR8C 1QCVA 1CAAA 5JVG1 3NFPI 1OA9A 2M6PA 4NOMA 1Y698 3IU3I 3GTML 3S15L 5B6CA 1LKMA 2A68D 3HKZP 2V0EA 3GTLA 1Y2MA 3WVOA 1TL8A 2RDVA 2VPXA 3CQZA 4KB4A 4CEJA 3GTGL 2NVYL 2G6GA 3LR8A 4XGHA 4GFQA 5RXNA 4TVMA 3GTPL 2O5JD 2HVYC 2J9UB 5C1BA 2ERJA 1BFYA 3PKJA 1VZHA 4OYDB 3GTJL 4POFA 4AI1A 2KI8A 1T8IA 3GTQL 5JVH1 3M4AA 2JA7A 1TWCL 2LKMB 3CZBA 2PMZP 4LHLA 2XJVA 2NYDA 4C5SA 1TWFL 2VUML 3K35A 1EK8A 4JAGA 1TWAA 4L48A 1I3QA 4QCLA 2E2HA 1RYTA 1DVBA 3M3YL 1BQ8A 2LCQA 1PFUA 2CR8A 2VL6A 4C5UA 1IW7D 4AN8A 3KYYA 2ZIXA 4A93L 2YUJA 1HQMD 5K2ME 4G6BA 3I4ML 4AVRA 1DD5A 1WQFA 1PPYA 3GTKA 5MLC9 5FTJA 2AE0X 4O26A 3QWZA 3PO3L 1BQ9A 2BH0A 5GLXA 1WQGA 4V2RA 2PVXA 4D7ZB 5IY0A 5GAGc 1R49A 3WWLA 2BE5D 3FKIL 5EINC 1IU5A 2R93L 3P8BA 1G8KA 4A3KL 4RV0A 3K5OA 2JI3A 5IYBL 3TM7B 2JA5L 1T9OA 3LWQB 1R0JA 2VPWA 4ENGA 5JSNB 1SC7A 3X2HA 5MGNA 3DU5A 4FG4A 2HR5A 4C2MA 4AHXA 3PIO1 8RXNA 5GADc 2M6OA 3GTLL 1DX8A 4FGUA 3IR7A
chains in the Genus database with same CATH topology
5DM71 2IV2X 1K4TA 4TPUA 1RDGA 1VZGA 4V196 1R0IA 1SEUA 3HKZA 3ML1A 5MF6A 4AHYA 5FTMA 3RYGA 5T5ID 1EJ9A 3VPBE 5DYIA 3PIP1 2PJJA 2K2DA 4IP9A 2V3VA 1PQFA 1S3SA 5EIOC 1G8JA 5DYGA 1B2JA 2R92A 1YV1A 1WLFA 2NVXA 2VK9A 2PVEA 1YUZA 2PICA 2X0PA 2PMZA 7RXNA 1S24A 4D3YA 2KN9A 2E2IA 1ZRPA 1OWCA 2Y0NA 1WJVA 1WQHA 1RYQA 2AYJA 1PT1A 2ERSA 4LMOA 1CZ5A 3J7Z1 3IR6A 2CKAA 1YNND 1SIWA 1EH1A 2PI8A 4RXNA 3WWNB 4AR4A 1AW8B 1Y1VA 1LTLA 5C9HA 2C45A 4AHZA 3IAYA 2E7ZA 1E61A 2LPJA 3HU2A 4FXDA 1SMUA 1S30A 4KDDA 1R7RA 1FHMA 3SJRA 1FHHA 3QQ7A 1VZIA 3ZG6A 1SMWA 1DMSA 1E32A 2JIQA 2XJUA 4ZN1B 1I6VD 4KAWX 3LR2A 5GLFA 1RB9A 4JADA 2NYAA 1NXEA 4QIWA 1ISEA 2Y0SA 1CR5A 2JIOA 1SMMA 2JA6A 1ZYRD 1UHDA 4KDIA 4JLRC 2XJPA 3O5AA 5T5MD 5GAEc 2B63A 3LHPS 2K3OA 4YWLA 1BRFA 5JSBB 1EU1A 2JIRA 3DU6A 3QC8A 1CADA 2PSMC 4L8IA 3LRDA 2MQAA 1T9QA 1H0HA 1PQEA 4POGA 1CZ4A 3K57A 2XJQA 2KKDA 1YUXA 3MPSA 4U671 3PWFA 3MAQA 5AN9H 5FTNA 2XJRA 1R0HA 3B0AB 6RXNA 2Z3QB 1Z92B 2WB1A 1I50A 4JAFA 4GS7D 3MSUA 4YWMA 1E5VA 4KC6A 3PKIA 1R0FA 3P9AA 1A36A 1A35A 1Y1WA 3QQCE 4FBSA 2N1DB 2JI1A 1JYBA 3SS2A 1IU6A 4WFN1 2NAPA 1T9PA 4AI2A 3K5NA 1GE9A 2GMGA 2MS3A 2H12A 1FDOA 3U44A 1E60A 1QCSA 1KQGA 1NH3A 5MLC3 3GTOA 2N3EA 4AYBA 4NOKA 1AA6A 2EEOB 2CW0D 2M4VA 3KYXA 3K5MA 1Y5IA 1H5NA 2R7ZA 4KDLA 1V9MA 1WCMA 1B13A 2VPYA 1C09A 4AONB 3J7Y1 2AQLA 4AHWA 3U4QA 3B08B 1YLEA 4AZDA 1B71A 5H1Sc 2K3NA 2MX9A 2V3BB 2A69D 4B8CD 4H3TA 1TMOA 2GAEA 1RDVA 4IP8A 2YU9A 3LNLA 1Y4ZA 1K4SA 1QDNA 1SFOA 2FIPA 2K3QA 2V0FA 5IZ2A 3RZTA 4XXBB 1R9TA 3LPEB 3PZAA 1KQFA 1TWGA 3H0GA 1E8JA 4K9FA 4UY81 4AOKB 2FIOA 3P2AA 3HU1A 1PYQA 2R4GA 3PLXB 5DM61 1E18A 4KO8A 4KODA 3K5LA 4AR6A 1MIUA 1Q8IA 2A6HD 3KYLA 4LHNA 4AAYA 1K83A 3K59A 1TGOA 2DMRA 1R5ZA 3DMRA 2F5JA 4ZN3B 2V45A 4KLNA 5C18A 1VC3B 3LF9A 4NOLA 1TWHA 4AR5A 4KB2A 1OWBA 1LKPA 1RWDA 1YK4A 2XJSA 1PT0A 1RRJA 1QYBA 4CRZA 1ZC1A 1NXGA 3KYUA 1R0GA 4CEIA 3GTMA 2PPTA 2DSXA 2LPIA 2PJHB 1FDIA 4GA5A 2LTHA 1LKOA 3GTGA 2NVYA 2QL0A 4AI0A 2JI2A 2B9SB 3GTPA 2X0OA 1IROA 1VCXA 4CRYG 1S2ZA 5CQGA 1IRNA 1PYUB 2B5ID 1R27A 3GTJA 2WAQA 5AI3A 3OUGA 3QQ8A 1PQHA 5EPPA 2PYAA 1DMRA 4JAEA 3GTQA 2L0ZA 1TWCA 4E6YA 2M4YA 3IR5A 1Q16A 4CEHA 4NOHA 3QVDA 1A31A 1TWFA 1YK5A 2VUMA 5MFZA 2G5DA 4D3ZA 2C6BA 2JIMA 5MFPA 2CKCA 5AI2A 4FYDA 1B2OA 4EJ3A 2Z3RB 2PNWA 4Q5VA 2X0QA 4Q5GA 2XJTA 1UHEA 3RZ6A 3TIWA 3LR6A 3KYVA 1H7VA 3KYWA 1SMYD 2JIPA 4GA6A 2MX8A 1BE7A 3CF2A 1OGYA 4AR3A 2A6ED 4AHCA 5FTLA 4ME3A 4CS0A 1IS1A 4AI3A 1NNQA 2F4QA 1ODHA 4DMRA 3FKIA 3K58A 3A44A 2C6AA 5FTKA 3HU3A 2R93A 2LYIA 2VPZA 4F3EA 2JA5A 1LPQA 5GAHc 1YNJD 1RR8C 1QCVA 1CAAA 5JVG1 3NFPI 2M6PA 4NOMA 1Y698 3IU3I 5B6CA 1LKMA 2A68D 2V0EA 3GTLA 3WVOA 1TL8A 2RDVA 2VPXA 3CQZA 4KB4A 4CEJA 2G6GA 3LR8A 4XGHA 4GFQA 5RXNA 4TVMA 2O5JD 2J9UB 5C1BA 2ERJA 1BFYA 3PKJA 1VZHA 4OYDB 4POFA 4AI1A 2KI8A 1T8IA 5JVH1 3M4AA 2JA7A 3CZBA 2LKMB 4LHLA 2XJVA 2NYDA 3K35A 1EK8A 4JAGA 1TWAA 1I3QA 4QCLA 2E2HA 1RYTA 1DVBA 1BQ8A 2LCQA 2CR8A 2VL6A 1IW7D 4AN8A 3KYYA 2ZIXA 2YUJA 1HQMD 5K2ME 4G6BA 1DD5A 1WQFA 1PPYA 3GTKA 5MLC9 5FTJA 2AE0X 4O26A 3QWZA 1BQ9A 1WQGA 2PVXA 4D7ZB 5IY0A 5GAGc 1R49A 3WWLA 2BE5D 5EINC 1IU5A 3P8BA 1G8KA 4RV0A 3K5OA 2JI3A 3TM7B 1T9OA 1R0JA 2VPWA 5JSNB 1SC7A 5MGNA 3DU5A 2HR5A 4C2MA 4AHXA 3PIO1 8RXNA 5GADc 2M6OA 1DX8A 4FGUA 3IR7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1TWA A;  2R92 A;  3CQZ A;  2BE5 D;  2NVX A;  1YNN D;  2NVY A;  3FKI A;  1I3Q A;  3GTG A;  2E2H A;  2O5J D;  1R9T A;  3GTP A;  1TWG A;  3H0G A;  2R93 A;  1TWH A;  2PMZ A;  1IW7 D;  1I6V D;  1Y1V A;  3GTO A;  1Y1W A;  4AYB A;  3GTJ A;  2JA5 A;  2CW0 D;  1HQM D;  2WAQ A;  2E2I A;  3HKZ A;  4QIW A;  2A69 D;  1SMY D;  1YNJ D;  2A6H D;  2Y0S A;  3GTK A;  3GTQ A;  2JA7 A;  1TWC A;  2JA6 A;  1ZYR D;  4C2M A;  3GTM A;  2YU9 A;  2R7Z A;  2B63 A;  2A68 D;  1TWF A;  2VUM A;  2A6E D;  1WCM A;  1SFO A;  1K83 A;  2WB1 A;  3GTL A;  1I50 A; 
#chains in the Genus database with same CATH topology
 3CQZ L;  4A3L L;  5DM7 1;  2IV2 X;  1K4T A;  2RFK B;  5GM9 A;  4TPU A;  1RDG A;  1VZG A;  4JP7 A;  5GLY A;  4V19 6;  1PFW A;  5IYD L;  1R0I A;  1SEU A;  3HKZ A;  3ML1 A;  4V2Q A;  3K7A L;  5MF6 A;  4AHY A;  5M5X L;  2JA7 L;  5FTM A;  1BW4 A;  3RYG A;  3S1M L;  1EJ9 A;  3VPB E;  5DYI A;  5T5I D;  3X2I A;  3PIP 1;  2PJJ A;  2K2D A;  4IP9 A;  2V3V A;  5C4J L;  1PQF A;  1S3S A;  4FER A;  5EIO C;  1G8J A;  5DYG A;  1B2J A;  5M3M L;  3LWP B;  1TWA L;  2R92 A;  3EZA A;  1YV1 A;  5C4X L;  1WLF A;  3FDJ A;  2NVX A;  4BAA A;  1I3Q L;  2VK9 A;  2E2H L;  3SUM A;  2PVE A;  1YUZ A;  2HCZ X;  2PIC A;  2X0P A;  2WB1 P;  5H4U A;  2PMZ A;  7RXN A;  1S24 A;  4D3Y A;  2KN9 A;  2E2I A;  1ZRP A;  3GTK L;  2JA6 L;  1OWC A;  1PFV A;  2Y0N A;  1WJV A;  2APO B;  1WQH A;  1RYQ A;  4BY1 L;  1T6P A;  2YII A;  2AYJ A;  1PT1 A;  2ERS A;  3S14 L;  4LMO A;  1CZ5 A;  3J7Z 1;  5IYC L;  3IR6 A;  3H9C A;  2CKA A;  1YNN D;  1SIW A;  1EH1 A;  2PI8 A;  5IP7 L;  4RXN A;  3WWN B;  4AR4 A;  1AW8 B;  3HOV L;  1Y1V A;  1LTL A;  3S17 L;  5C9H A;  2C45 A;  4AHZ A;  3IAY A;  2E7Z A;  4A3E L;  1E61 A;  3X2N A;  2LPJ A;  4BY7 L;  3HU2 A;  4FXD A;  1SMU A;  1S30 A;  4KDD A;  1R7R A;  1FHM A;  3SJR A;  1FHH A;  3QQ7 A;  1VZI A;  3ZG6 A;  3RZO L;  1SMW A;  1DMS A;  3HAX C;  1E32 A;  2JIQ A;  2XJU A;  4ZN1 B;  5C44 L;  4A3M L;  4JP6 A;  1I6V D;  4KAW X;  3LR2 A;  5GLF A;  1RB9 A;  4JAD A;  2NYA A;  1NXE A;  4QIW A;  1ISE A;  3H97 A;  2Y0S A;  1CR5 A;  2JIO A;  1SMM A;  1T6J A;  4ZM7 A;  2JA6 A;  3H99 A;  1ZYR D;  1UHD A;  4KDI A;  4JLR C;  2XJP A;  3O5A A;  5T5M D;  5GAE c;  2B63 A;  3LHP S;  2K3O A;  4YWL A;  1BRF A;  5JSB B;  1EU1 A;  2JIR A;  3DU6 A;  3NZ4 A;  2R92 L;  3QC8 A;  3SUJ A;  1CAD A;  2PSM C;  4L8I A;  3LRD A;  2MQA A;  1T9Q A;  2NVX L;  1H0H A;  1PQE A;  4POG A;  1CZ4 A;  3K57 A;  2XJQ A;  2KKD A;  4X6A L;  4C3H L;  1YUX A;  3MPS A;  4U67 1;  3X2O A;  2E2I L;  1F4L A;  2EY4 E;  3PWF A;  4A3B L;  3MAQ A;  1PZX A;  5AN9 H;  1N10 A;  2MP0 A;  5FTN A;  2XJR A;  1R0H A;  3B0A B;  6RXN A;  2Z3Q B;  1Z92 B;  2WB1 A;  4QIW P;  1I50 A;  4JAF A;  4GS7 D;  2Y0S P;  3MSU A;  4YWM A;  1E5V A;  4KC6 A;  1QQT A;  3PKI A;  1R0F A;  3P9A A;  2KQA A;  1A36 A;  1A35 A;  1Y1V L;  1Y1W A;  2NVQ L;  3QQC E;  4FBS A;  2N1D B;  4A3F L;  2JI1 A;  4C2M 1;  1JYB A;  3SS2 A;  1IU6 A;  4WFN 1;  4A3D L;  2NAP A;  1T9P A;  4AI2 A;  3K5N A;  1GE9 A;  3EZE A;  2GMG A;  2MS3 A;  2H12 A;  1FDO A;  3U44 A;  3HOW L;  4A3C L;  1E60 A;  1QCS A;  4BBR L;  1KQG A;  3HOY L;  1NH3 A;  5MLC 3;  2E2J L;  5C3E L;  3GTO A;  2N3E A;  4AYB A;  4NOK A;  3LWV B;  4BXX L;  3HOU L;  2CW0 D;  2EEO B;  1AA6 A;  1EZA A;  2M4V A;  3KYX A;  5M5Y L;  3K5M A;  3X2L A;  5M5W L;  1Y5I A;  1H5N A;  2B63 L;  2R7Z A;  2ENG A;  4KDL A;  1V9M A;  1WCM A;  1B13 A;  2VPY A;  1C09 A;  4AON B;  3J7Y 1;  3PO2 L;  2AQL A;  1P7P A;  3ENG A;  3LWO B;  4JS7 A;  4AHW A;  3U4Q A;  4C6G A;  3B08 B;  3HOZ L;  1YLE A;  3X2J A;  4AZD A;  1B71 A;  5H1S c;  2K3N A;  2MX9 A;  2V3B B;  2A69 D;  4B8C D;  4H3T A;  1TMO A;  3D30 A;  5IP9 L;  1ZYM A;  3HJW B;  2GAE A;  1RDV A;  4IP8 A;  2YU9 A;  3LNL A;  1Y4Z A;  4AYB P;  4A3I L;  1K4S A;  1QDN A;  1SFO A;  1I50 L;  1I6H L;  2EZB A;  2FIP A;  2K3Q A;  2V0F A;  1W27 A;  5IZ2 A;  3RZT A;  4XXB B;  1R9T A;  3LPE B;  3PZA A;  1KQF A;  1TWG A;  3H0G A;  1E8J A;  4K9F A;  4UY8 1;  4AOK B;  2FIO A;  3P2A A;  1Y1W L;  3HU1 A;  1PYQ A;  3SUL A;  2R4G A;  2EZC A;  3H9B A;  3PLX B;  3S1N L;  2JA8 L;  5DM6 1;  1E18 A;  2AQC A;  4KO8 A;  4KOD A;  3K5L A;  4AR6 A;  1MIU A;  1Q8I A;  2A6H D;  4CQ5 A;  3KYL A;  4Y52 L;  1BW3 A;  4LHN A;  4AAY A;  1K83 A;  3K59 A;  1TGO A;  2DMR A;  1R5Z A;  3PL5 A;  3DMR A;  2F5J A;  1WC2 A;  4ZN3 B;  2V45 A;  4KLN A;  5C18 A;  1VC3 B;  3LF9 A;  4NOL A;  3S16 L;  4Y7N L;  1TWH A;  2HRO A;  5FJ8 L;  3H3V M;  3GTO L;  3X2P A;  4AR5 A;  4KB2 A;  3SUK A;  1OWB A;  1LKP A;  1RWD A;  1YK4 A;  2XJS A;  3S2H L;  1PT0 A;  1RRJ A;  1QYB A;  4CRZ A;  3M4O L;  1ZC1 A;  4BAB A;  1NXG A;  3KYU A;  4C5R A;  1R0G A;  2R7Z L;  4CEI A;  3S2D L;  3GTM A;  1HD5 A;  2PPT A;  3EZB A;  1WCM L;  2DSX A;  2LPI A;  3HOX L;  3LWR B;  3S1Q L;  2PJH B;  4A3J L;  4FFT A;  3X2G A;  3X2M A;  4BBS L;  1EZB A;  1FDI A;  4GA5 A;  2LTH A;  1LKO A;  4C3I L;  3GTG A;  2NVY A;  2QL0 A;  4AI0 A;  2JI2 A;  2B9S B;  3GTP A;  2X0O A;  1IRO A;  2EZA A;  1VCX A;  1S2Z A;  5CQG A;  3S1R L;  4CRY G;  1IRN A;  1PYU B;  2B5I D;  1R27 A;  3GTJ A;  2WAQ A;  5AI3 A;  3OUG A;  3QQ8 A;  1PQH A;  5EPP A;  5M3F L;  2PYA A;  4A3G L;  3X2K A;  1DMR A;  4JAE A;  3GTQ A;  2L0Z A;  1TWC A;  4E6Y A;  2M4Y A;  3IR5 A;  2HWG A;  1Q16 A;  4CEH A;  1PFY A;  2YU9 L;  4NOH A;  3QVD A;  4FG2 A;  1A31 A;  1TWF A;  1YK5 A;  1L8F A;  2VUM A;  5MFZ A;  1SFO L;  2G5D A;  4D3Z A;  2C6B A;  2JIM A;  5MFP A;  3RZD L;  2NVT L;  2CKC A;  5FLM L;  5AI2 A;  4FYD A;  1B2O A;  1OA7 A;  4EJ3 A;  1R9T L;  1TWG L;  3H0G L;  2Z3R B;  2PNW A;  3M3G A;  4Q5V A;  2X0Q A;  4Q5G A;  2XJT A;  4C3J L;  1UHE A;  3JR7 A;  3RZ6 A;  3TIW A;  3LR6 A;  3KYV A;  1H7V A;  3KYW A;  1SMY D;  2AUS B;  2JIP A;  4GA6 A;  3MQK B;  2MX8 A;  1BE7 A;  3CF2 A;  3HJY B;  4AR3 A;  1OGY A;  2A6E D;  4AHC A;  1K83 L;  2WAQ P;  5FTL A;  4ME3 A;  4CS0 A;  1IS1 A;  4AI3 A;  1NNQ A;  2F4Q A;  1ODH A;  4JCW A;  4DMR A;  3FKI A;  3K58 A;  3A44 A;  4JJO A;  2C6A A;  5FTK A;  3I4N L;  1TWH L;  3HU3 A;  2R93 A;  2LYI A;  2VPZ A;  4F3E A;  2JA5 A;  1LPQ A;  5GAH c;  1YNJ D;  1RR8 C;  1QCV A;  1CAA A;  5JVG 1;  3NFP I;  1OA9 A;  2M6P A;  4NOM A;  1Y69 8;  3IU3 I;  3GTM L;  3S15 L;  5B6C A;  1LKM A;  2A68 D;  3HKZ P;  2V0E A;  3GTL A;  1Y2M A;  3WVO A;  1TL8 A;  2RDV A;  2VPX A;  3CQZ A;  4KB4 A;  4CEJ A;  3GTG L;  2NVY L;  2G6G A;  3LR8 A;  4XGH A;  4GFQ A;  5RXN A;  4TVM A;  3GTP L;  2O5J D;  2HVY C;  2J9U B;  5C1B A;  2ERJ A;  1BFY A;  3PKJ A;  1VZH A;  4OYD B;  3GTJ L;  4POF A;  4AI1 A;  2KI8 A;  1T8I A;  3GTQ L;  5JVH 1;  3M4A A;  2JA7 A;  1TWC L;  2LKM B;  3CZB A;  2PMZ P;  4LHL A;  2XJV A;  2NYD A;  4C5S A;  1TWF L;  2VUM L;  3K35 A;  1EK8 A;  4JAG A;  1TWA A;  4L48 A;  1I3Q A;  4QCL A;  2E2H A;  1RYT A;  1DVB A;  3M3Y L;  1BQ8 A;  2LCQ A;  1PFU A;  2CR8 A;  2VL6 A;  4C5U A;  1IW7 D;  4AN8 A;  3KYY A;  2ZIX A;  4A93 L;  2YUJ A;  1HQM D;  5K2M E;  4G6B A;  3I4M L;  4AVR A;  1DD5 A;  1WQF A;  1PPY A;  3GTK A;  5MLC 9;  5FTJ A;  2AE0 X;  4O26 A;  3QWZ A;  3PO3 L;  1BQ9 A;  2BH0 A;  5GLX A;  1WQG A;  4V2R A;  2PVX A;  4D7Z B;  5IY0 A;  5GAG c;  1R49 A;  3WWL A;  2BE5 D;  3FKI L;  5EIN C;  1IU5 A;  2R93 L;  3P8B A;  1G8K A;  4A3K L;  4RV0 A;  3K5O A;  2JI3 A;  5IYB L;  3TM7 B;  2JA5 L;  1T9O A;  3LWQ B;  1R0J A;  2VPW A;  4ENG A;  5JSN B;  1SC7 A;  3X2H A;  5MGN A;  3DU5 A;  4FG4 A;  2HR5 A;  4C2M A;  4AHX A;  3PIO 1;  8RXN A;  5GAD c;  2M6O A;  3GTL L;  1DX8 A;  4FGU A;  3IR7 A; 
#chains in the Genus database with same CATH homology
 5DM7 1;  2IV2 X;  1K4T A;  4TPU A;  1RDG A;  1VZG A;  4V19 6;  1R0I A;  1SEU A;  3HKZ A;  3ML1 A;  5MF6 A;  4AHY A;  5FTM A;  3RYG A;  5T5I D;  1EJ9 A;  3VPB E;  5DYI A;  3PIP 1;  2PJJ A;  2K2D A;  4IP9 A;  2V3V A;  1PQF A;  1S3S A;  5EIO C;  1G8J A;  5DYG A;  1B2J A;  2R92 A;  1YV1 A;  1WLF A;  2NVX A;  2VK9 A;  2PVE A;  1YUZ A;  2PIC A;  2X0P A;  2PMZ A;  7RXN A;  1S24 A;  4D3Y A;  2KN9 A;  2E2I A;  1ZRP A;  1OWC A;  2Y0N A;  1WJV A;  1WQH A;  1RYQ A;  2AYJ A;  1PT1 A;  2ERS A;  4LMO A;  1CZ5 A;  3J7Z 1;  3IR6 A;  2CKA A;  1YNN D;  1SIW A;  1EH1 A;  2PI8 A;  4RXN A;  3WWN B;  4AR4 A;  1AW8 B;  1Y1V A;  1LTL A;  5C9H A;  2C45 A;  4AHZ A;  3IAY A;  2E7Z A;  1E61 A;  2LPJ A;  3HU2 A;  4FXD A;  1SMU A;  1S30 A;  4KDD A;  1R7R A;  1FHM A;  3SJR A;  1FHH A;  3QQ7 A;  1VZI A;  3ZG6 A;  1SMW A;  1DMS A;  1E32 A;  2JIQ A;  2XJU A;  4ZN1 B;  1I6V D;  4KAW X;  3LR2 A;  5GLF A;  1RB9 A;  4JAD A;  2NYA A;  1NXE A;  4QIW A;  1ISE A;  2Y0S A;  1CR5 A;  2JIO A;  1SMM A;  2JA6 A;  1ZYR D;  1UHD A;  4KDI A;  4JLR C;  2XJP A;  3O5A A;  5T5M D;  5GAE c;  2B63 A;  3LHP S;  2K3O A;  4YWL A;  1BRF A;  5JSB B;  1EU1 A;  2JIR A;  3DU6 A;  3QC8 A;  1CAD A;  2PSM C;  4L8I A;  3LRD A;  2MQA A;  1T9Q A;  1H0H A;  1PQE A;  4POG A;  1CZ4 A;  3K57 A;  2XJQ A;  2KKD A;  1YUX A;  3MPS A;  4U67 1;  3PWF A;  3MAQ A;  5AN9 H;  5FTN A;  2XJR A;  1R0H A;  3B0A B;  6RXN A;  2Z3Q B;  1Z92 B;  2WB1 A;  1I50 A;  4JAF A;  4GS7 D;  3MSU A;  4YWM A;  1E5V A;  4KC6 A;  3PKI A;  1R0F A;  3P9A A;  1A36 A;  1A35 A;  1Y1W A;  3QQC E;  4FBS A;  2N1D B;  2JI1 A;  1JYB A;  3SS2 A;  1IU6 A;  4WFN 1;  2NAP A;  1T9P A;  4AI2 A;  3K5N A;  1GE9 A;  2GMG A;  2MS3 A;  2H12 A;  1FDO A;  3U44 A;  1E60 A;  1QCS A;  1KQG A;  1NH3 A;  5MLC 3;  3GTO A;  2N3E A;  4AYB A;  4NOK A;  1AA6 A;  2EEO B;  2CW0 D;  2M4V A;  3KYX A;  3K5M A;  1Y5I A;  1H5N A;  2R7Z A;  4KDL A;  1V9M A;  1WCM A;  1B13 A;  2VPY A;  1C09 A;  4AON B;  3J7Y 1;  2AQL A;  4AHW A;  3U4Q A;  3B08 B;  1YLE A;  4AZD A;  1B71 A;  5H1S c;  2K3N A;  2MX9 A;  2V3B B;  2A69 D;  4B8C D;  4H3T A;  1TMO A;  2GAE A;  1RDV A;  4IP8 A;  2YU9 A;  3LNL A;  1Y4Z A;  1K4S A;  1QDN A;  1SFO A;  2FIP A;  2K3Q A;  2V0F A;  5IZ2 A;  3RZT A;  4XXB B;  1R9T A;  3LPE B;  3PZA A;  1KQF A;  1TWG A;  3H0G A;  1E8J A;  4K9F A;  4UY8 1;  4AOK B;  2FIO A;  3P2A A;  3HU1 A;  1PYQ A;  2R4G A;  3PLX B;  5DM6 1;  1E18 A;  4KO8 A;  4KOD A;  3K5L A;  4AR6 A;  1MIU A;  1Q8I A;  2A6H D;  3KYL A;  4LHN A;  4AAY A;  1K83 A;  3K59 A;  1TGO A;  2DMR A;  1R5Z A;  3DMR A;  2F5J A;  4ZN3 B;  2V45 A;  4KLN A;  5C18 A;  1VC3 B;  3LF9 A;  4NOL A;  1TWH A;  4AR5 A;  4KB2 A;  1OWB A;  1LKP A;  1RWD A;  1YK4 A;  2XJS A;  1PT0 A;  1RRJ A;  1QYB A;  4CRZ A;  1ZC1 A;  1NXG A;  3KYU A;  1R0G A;  4CEI A;  3GTM A;  2PPT A;  2DSX A;  2LPI A;  2PJH B;  1FDI A;  4GA5 A;  2LTH A;  1LKO A;  3GTG A;  2NVY A;  2QL0 A;  4AI0 A;  2JI2 A;  2B9S B;  3GTP A;  2X0O A;  1IRO A;  1VCX A;  4CRY G;  1S2Z A;  5CQG A;  1IRN A;  1PYU B;  2B5I D;  1R27 A;  3GTJ A;  2WAQ A;  5AI3 A;  3OUG A;  3QQ8 A;  1PQH A;  5EPP A;  2PYA A;  1DMR A;  4JAE A;  3GTQ A;  2L0Z A;  1TWC A;  4E6Y A;  2M4Y A;  3IR5 A;  1Q16 A;  4CEH A;  4NOH A;  3QVD A;  1A31 A;  1TWF A;  1YK5 A;  2VUM A;  5MFZ A;  2G5D A;  4D3Z A;  2C6B A;  2JIM A;  5MFP A;  2CKC A;  5AI2 A;  4FYD A;  1B2O A;  4EJ3 A;  2Z3R B;  2PNW A;  4Q5V A;  2X0Q A;  4Q5G A;  2XJT A;  1UHE A;  3RZ6 A;  3TIW A;  3LR6 A;  3KYV A;  1H7V A;  3KYW A;  1SMY D;  2JIP A;  4GA6 A;  2MX8 A;  1BE7 A;  3CF2 A;  1OGY A;  4AR3 A;  2A6E D;  4AHC A;  5FTL A;  4ME3 A;  4CS0 A;  1IS1 A;  4AI3 A;  1NNQ A;  2F4Q A;  1ODH A;  4DMR A;  3FKI A;  3K58 A;  3A44 A;  2C6A A;  5FTK A;  3HU3 A;  2R93 A;  2LYI A;  2VPZ A;  4F3E A;  2JA5 A;  1LPQ A;  5GAH c;  1YNJ D;  1RR8 C;  1QCV A;  1CAA A;  5JVG 1;  3NFP I;  2M6P A;  4NOM A;  1Y69 8;  3IU3 I;  5B6C A;  1LKM A;  2A68 D;  2V0E A;  3GTL A;  3WVO A;  1TL8 A;  2RDV A;  2VPX A;  3CQZ A;  4KB4 A;  4CEJ A;  2G6G A;  3LR8 A;  4XGH A;  4GFQ A;  5RXN A;  4TVM A;  2O5J D;  2J9U B;  5C1B A;  2ERJ A;  1BFY A;  3PKJ A;  1VZH A;  4OYD B;  4POF A;  4AI1 A;  2KI8 A;  1T8I A;  5JVH 1;  3M4A A;  2JA7 A;  3CZB A;  2LKM B;  4LHL A;  2XJV A;  2NYD A;  3K35 A;  1EK8 A;  4JAG A;  1TWA A;  1I3Q A;  4QCL A;  2E2H A;  1RYT A;  1DVB A;  1BQ8 A;  2LCQ A;  2CR8 A;  2VL6 A;  1IW7 D;  4AN8 A;  3KYY A;  2ZIX A;  2YUJ A;  1HQM D;  5K2M E;  4G6B A;  1DD5 A;  1WQF A;  1PPY A;  3GTK A;  5MLC 9;  5FTJ A;  2AE0 X;  4O26 A;  3QWZ A;  1BQ9 A;  1WQG A;  2PVX A;  4D7Z B;  5IY0 A;  5GAG c;  1R49 A;  3WWL A;  2BE5 D;  5EIN C;  1IU5 A;  3P8B A;  1G8K A;  4RV0 A;  3K5O A;  2JI3 A;  3TM7 B;  1T9O A;  1R0J A;  2VPW A;  5JSN B;  1SC7 A;  5MGN A;  3DU5 A;  2HR5 A;  4C2M A;  4AHX A;  3PIO 1;  8RXN A;  5GAD c;  2M6O A;  1DX8 A;  4FGU A;  3IR7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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