2W75A

Structures of p. aeruginosa fpva bound to heterologous pyoverdines: apo-fpva
Total Genus 226
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
226
sequence length
772
structure length
772
Chain Sequence
QEVEFDIPPQALGSALQEFGRQADIQVLYRPEEVRNKRSSAIKGKLEPNQAITELLRGTGASVDFQGNAITISVAEAADSSVDLGATMITSNQLGTITEDSGSYTPGTIATATRLVLTPRETPQSITVVTRQNMDDFGLNNIDDVMRHTPGITVSAYDTDRNNYYARGFSINNFQYDGIPSTARNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGAGSLGATINLIRKKPTHEFKGHVELGAGSWDNYRSELDVSGPLTESGNVRGRAVAAYQDKHSFMDHYERKTSVYYGILEFDLNPDTMLTVGADYQDNDPKGSGWSGSFPLFDSQGNRNDVSRSFNNGAKWSSWEQYTRTVFANLEHNFANGWVGKVQLDHKINGYHAPLGAIMGDWPAPDNSAKIVAQKYTGETKSNSLDIYLTGPFQFLGREHELVVGTSASFSHWEGKSYWNLRNYDNTTDDFINWDGDIGKPDWGTPSQYIDDKTRQLGSYMTARFNVTDDLNLFLGGRVVDYRVTGLNPTIRESGRFIPYVGAVYDLNDTYSVYASYTDIFMPQDSWYRDSSNKLLEPDEGQNYEIGIKGEYLDGRLNTSLAYFEIHEENRAEEDALYNSKPTNPAITYAYKGIKAKTKGYEAEISGELAPGWQVQAGYTHKIIRDDSGKKVSTWEPQDQLSLYTSYKFKGALDKLTVGGGARWQGKSWQMVYNNPRSRWEKFSQEDYWLVDLMARYQITDKLSASVNVNNVFDKTYYTNIGFYTSASYGDPRNLMFSTRWDF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Fpva Bound to Non-Cognate Pyoverdines: Molecular Basis of Siderophore Recognition by an Iron Transporter.
pubmed doi rcsb
molecule keywords FERRIPYOVERDINE RECEPTOR
molecule tags Receptor
source organism Pseudomonas aeruginosa
total genus 226
structure length 772
sequence length 772
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-12-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00593 TonB_dep_Rec TonB dependent receptor
A PF07660 STN Secretin and TonB N terminus short domain
A PF07715 Plug TonB-dependent Receptor Plug Domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.170.20 Mainly Beta Beta Barrel Maltoporin; Chain A TonB-dependent receptor, beta-barrel domain 2w75A03
2.170.130.10 Mainly Beta Beta Complex Ferric Hydroxamate Uptake Protein; Chain A, domain 1 TonB-dependent receptor, plug domain 2w75A02
3.55.50.30 Alpha Beta 3-Layer(bab) Sandwich Phage tail protein beta-alpha-beta fold Phage tail protein beta-alpha-beta fold 2w75A01
2IAHA 2O5PA 2W6UA 3V8XA 2W6TA 4B7OA 1ZZVA 2M5JA 2FCPA 1QFGA 3GR5A 4JTMA 2W76A 1QFFA 2GUFA 3RGMA 2A02A 1NQEA 1NQFA 3CSLA 1KMPA 3EFMA 1NQGA 2W78A 2D1UA 4M0HA 1BY5A 3M8DA 4EPAA 3CSNA 1FI1A 4AIPA 1FCPA 3M8BA 1BY3A 5FOKA 3QLBA 2HDIA 3FHHA 1FEPA 4RDRA 1KMOA 4M0NA 4CU4A 1PO0A 3V89A 4AR0A 4RDTA 2W75A 1XKHA 4G08A 1PO3A 3EZJA 1NQHA 1QKCA 1QJQA 1PNZA 1UJWA 2W77A 1XKWA 4AIQA 3DDRA 2GRXA 3RGNA 2W16A 2YSUA 2HDFA 2GSKA
chains in the Genus database with same CATH superfamily
2IAHA 2W6TA 1ZZVA 1QFGA 2W76A 3CSLA 1KMPA 1MPNA 3M8BA 2HDIA 1FEPA 4M0NA 1WTHD 4RDTA 2W75A 1PO3A 1QKCA 1PNZA 2W77A 1XKWA 4AIQA 2YSUA 2GSKA 4B7OA 2FCPA 3GR5A 1OH2P 1QFFA 3D37A 1NQEA 1NQGA 2W78A 4EPAA 3CSNA 1FI1A 1FCPA 3QLBA 1A0TP 1MPOA 4CU4A 1MPQA 3GS9A 3V89A 4MTKA 4G08A 4UHVA 1MALA 3EZJA 1NQHA 1AF6A 2GRXA 2W16A 2P5ZX 2MPRA 2L4WA 1JBIA 2Z6BD 2A02A 3CDDA 1NQFA 2D1UA 1MPMA 1A0SP 1BY5A 5FOKA 2WZPR 3OV5A 1K28D 4RDRA 1KMOA 3ADYA 1XKHA 3DDRA 3RGNA 4AR0A 1WRUA 2X531 2O5PA 2W6UA 3V8XA 2M5JA 1OH2Q 4JTMA 3RGMA 2GUFA 3EFMA 4M0HA 3M8DA 4AIPA 1BY3A 3FHHA 1MPRA 1PO0A 1QJQA 1UJWA 2HDFA
chains in the Genus database with same CATH topology
2IAHA 2W6TA 1ZZVA 1QFGA 2W76A 3CSLA 1KMPA 3M8BA 2HDIA 1FEPA 4M0NA 1WTHD 4RDTA 2W75A 1PO3A 1QKCA 1PNZA 2W77A 1XKWA 4AIQA 2YSUA 2GSKA 4B7OA 2FCPA 3GR5A 1QFFA 1NQEA 1NQGA 2W78A 4EPAA 3CSNA 1FI1A 1FCPA 3QLBA 4CU4A 3GS9A 3V89A 4G08A 3EZJA 1NQHA 2GRXA 2W16A 2L4WA 2Z6BD 2A02A 1NQFA 2D1UA 1BY5A 5FOKA 2WZPR 3OV5A 1K28D 4RDRA 1KMOA 3ADYA 1XKHA 3DDRA 3RGNA 4AR0A 2X531 2O5PA 2W6UA 3V8XA 2M5JA 4JTMA 3RGMA 2GUFA 3EFMA 4M0HA 3M8DA 4AIPA 1BY3A 3FHHA 1PO0A 1QJQA 1UJWA 2HDFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2IAH A;  2O5P A;  2W6U A;  3V8X A;  2W6T A;  4B7O A;  1ZZV A;  2M5J A;  2FCP A;  1QFG A;  3GR5 A;  4JTM A;  2W76 A;  1QFF A;  2GUF A;  3RGM A;  2A02 A;  1NQE A;  1NQF A;  3CSL A;  1KMP A;  3EFM A;  1NQG A;  2W78 A;  2D1U A;  4M0H A;  1BY5 A;  3M8D A;  4EPA A;  3CSN A;  1FI1 A;  4AIP A;  1FCP A;  3M8B A;  1BY3 A;  5FOK A;  3QLB A;  2HDI A;  3FHH A;  1FEP A;  4RDR A;  1KMO A;  4M0N A;  4CU4 A;  1PO0 A;  3V89 A;  4AR0 A;  4RDT A;  2W75 A;  1XKH A;  4G08 A;  1PO3 A;  3EZJ A;  1NQH A;  1QKC A;  1QJQ A;  1PNZ A;  1UJW A;  2W77 A;  1XKW A;  4AIQ A;  3DDR A;  2GRX A;  3RGN A;  2W16 A;  2YSU A;  2HDF A;  2GSK A; 
#chains in the Genus database with same CATH topology
 2IAH A;  2W6T A;  1ZZV A;  1QFG A;  2W76 A;  3CSL A;  1KMP A;  1MPN A;  3M8B A;  2HDI A;  1FEP A;  4M0N A;  1WTH D;  4RDT A;  2W75 A;  1PO3 A;  1QKC A;  1PNZ A;  2W77 A;  1XKW A;  4AIQ A;  2YSU A;  2GSK A;  4B7O A;  2FCP A;  3GR5 A;  1OH2 P;  1QFF A;  3D37 A;  1NQE A;  1NQG A;  2W78 A;  4EPA A;  3CSN A;  1FI1 A;  1FCP A;  3QLB A;  1A0T P;  1MPO A;  4CU4 A;  1MPQ A;  3GS9 A;  3V89 A;  4MTK A;  4G08 A;  4UHV A;  1MAL A;  3EZJ A;  1NQH A;  1AF6 A;  2GRX A;  2W16 A;  2P5Z X;  2MPR A;  2L4W A;  1JBI A;  2Z6B D;  2A02 A;  3CDD A;  1NQF A;  2D1U A;  1MPM A;  1A0S P;  1BY5 A;  5FOK A;  2WZP R;  3OV5 A;  1K28 D;  4RDR A;  1KMO A;  3ADY A;  1XKH A;  3DDR A;  3RGN A;  4AR0 A;  1WRU A;  2X53 1;  2O5P A;  2W6U A;  3V8X A;  2M5J A;  1OH2 Q;  4JTM A;  3RGM A;  2GUF A;  3EFM A;  4M0H A;  3M8D A;  4AIP A;  1BY3 A;  3FHH A;  1MPR A;  1PO0 A;  1QJQ A;  1UJW A;  2HDF A; 
#chains in the Genus database with same CATH homology
 2IAH A;  2W6T A;  1ZZV A;  1QFG A;  2W76 A;  3CSL A;  1KMP A;  3M8B A;  2HDI A;  1FEP A;  4M0N A;  1WTH D;  4RDT A;  2W75 A;  1PO3 A;  1QKC A;  1PNZ A;  2W77 A;  1XKW A;  4AIQ A;  2YSU A;  2GSK A;  4B7O A;  2FCP A;  3GR5 A;  1QFF A;  1NQE A;  1NQG A;  2W78 A;  4EPA A;  3CSN A;  1FI1 A;  1FCP A;  3QLB A;  4CU4 A;  3GS9 A;  3V89 A;  4G08 A;  3EZJ A;  1NQH A;  2GRX A;  2W16 A;  2L4W A;  2Z6B D;  2A02 A;  1NQF A;  2D1U A;  1BY5 A;  5FOK A;  2WZP R;  3OV5 A;  1K28 D;  4RDR A;  1KMO A;  3ADY A;  1XKH A;  3DDR A;  3RGN A;  4AR0 A;  2X53 1;  2O5P A;  2W6U A;  3V8X A;  2M5J A;  4JTM A;  3RGM A;  2GUF A;  3EFM A;  4M0H A;  3M8D A;  4AIP A;  1BY3 A;  3FHH A;  1PO0 A;  1QJQ A;  1UJW A;  2HDF A; 
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