2XN7A

Crystal structure of thyroxine-binding globulin complexed with thyroxine-fluoresein (t405-cf)
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
339
structure length
339
Chain Sequence
ATLYKMSSINADFAFNLYRRFTVETPDKNIFFSPVSISAALVMLSFGACCSTQTEIVETLGFNLTDTPMVEIQHGFQHLICSLNFPKKELELQIGNALFIGKHLKPLAKFLNDVKTLYETEVFSTDFSNISAAKQEINSHVEMQTKGKVVGLIQDLKPNTIMVLVNYIHFKAQWANPFDPSKTEDSSSFLIDKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDYSKNALALFVLPKEGQMESVEAAMSSKTLKKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQHAYSENADFSGLTEDNGLKLSNAAHKAVLHIGEKGTEAAGAMFLEAIPR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport
molecule keywords THYROXINE-BINDING GLOBULIN
publication title Allosteric Modulation of Hormone Release from Thyroxine and Corticosteroid Binding-Globulins.
pubmed doi rcsb
source organism Homo sapiens
total genus 103
structure length 339
sequence length 339
ec nomenclature
pdb deposition date 2010-07-30
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.39.10 Mainly Beta Roll Alpha-1-antitrypsin; domain 1 Alpha-1-antitrypsin, domain 1 2xn7A02
3.30.497.10 Alpha Beta 2-Layer Sandwich Antithrombin; Chain I, domain 2 Antithrombin, subunit I, domain 2 2xn7A01
3PB1I 2ARRA 2WY0C 3CWMA 3LE2A 1M93B 2ARQA 1DZGI 1R1LI 2HIJI 2ACHA 3Q02A 2XN6A 4YIAA 2XN5A 4Y3KA 1DB2A 7APIA 3OZQA 4EB1L 1LK6I 2H4PA 3NDAA 1KCTA 5EI0A 4ZK0A 1MTPA 2BEHL 1ANTI 1F0CA 2PEEA 4ROAA 4RO9A 2B4XL 3KCGI 1QLPA 1XQGA 1WZ9A 5BRRI 3F02A 1LJ5A 4DY7C 2GD4C 1OVAC 1OC0A 5CDZA 1OVAB 1QMNA 4AU2A 1HP7A 1K9OI 2OL2A 1JVQI 2V95A 3PZFA 1A7CA 3NDFA 4AFXA 3CAAA 2WXZA 4KDSA 1JJOC 4AJUA 3UT3A 2OAYA 4G8RA 8APIA 5C98A 3DLWA 4GA7A 5HGCA 1DVNA 1SR5A 1ATTA 1YXAA 2CEOA 2RIVA 1AS4A 3LW2A 4AU4A 9APIA 2R9YA 2WXXA 3CVMA 3Q03A 4DY0A 4ROBA 1JRRA 2HI9A 4PYWA 2QUGA 1BY7A 1OPHA 3STOA 1HLEA 1OYHI 1EZXA 1JTIA 1IMVA 1ATUA 2B5TI 4Y40A 3T1PA 5IO1A 9PAIA 1SNGA 4P0FA 4DTEA 2RIWA 4IC0A 1DZHI 4R9IA 3DRUA 4AU3A 1DZGL 1LQ8A 1D5SA 2HIJL 3NE4A 5CE0A 1T1FA 4ZK3A 4EB1I 3EOXA 1SEKA 5INWA 5CDXA 2VDXA 4X30A 2ZV6A 3R4LA 2BEHI 1OO8A 1OVAA 1AZXI 2VDYA 1E03I 2B4XI 2D26A 1NQ9I 1E05I 1JMJA 2DUTA 1JMOA 1BR8I 1TB6I 1XQJA 3EVJI 3B9FI 4AJTA 4AQHA 1DVMA 3DY0A 1IZ2A 4G8OA 2H4RA 1PSIA 1DZHL 3DRMA 3ZHAA 2ZNHA 4AU3B 3NDDA 2H4QA 1E04I 4CAAA 1XU8A 2PEFA 3VVJA 3H5CA 4C49A 3CWLA 2WXZC 3F5NA 1ATHA 4IF8A 4P0OA 4BB2A 2WY1A 4C41A 1C5GA 1UHGA 2WXWA 3FGQA 2ANTI 2XN3A 1B3KA 3F1SA 4RSQA 1QMBA 2WXYC 2XN7A 1C8OA 2VH4A 1OYHL
chains in the Genus database with same CATH superfamily
3PB1I 2ARRA 2WY0C 3CWMA 3LE2A 1M93B 2ARQA 1DZGI 1R1LI 2HIJI 2ACHA 3Q02A 2XN6A 4YIAA 2XN5A 4Y3KA 1DB2A 7APIA 3OZQA 4EB1L 1LK6I 2H4PA 3NDAA 1KCTA 5EI0A 4ZK0A 1MTPA 2BEHL 1ANTI 1F0CA 2PEEA 4ROAA 4RO9A 2B4XL 3KCGI 1QLPA 1XQGA 1WZ9A 5BRRI 3F02A 1LJ5A 4DY7C 2GD4C 1OVAC 1OC0A 5CDZA 1OVAB 1QMNA 4AU2A 1HP7A 1K9OI 2OL2A 1JVQI 2V95A 3PZFA 1A7CA 3NDFA 4AFXA 3CAAA 2WXZA 4KDSA 1JJOC 4AJUA 3UT3A 2OAYA 4G8RA 8APIA 5C98A 3DLWA 4GA7A 5HGCA 1DVNA 1SR5A 1ATTA 1YXAA 2CEOA 2RIVA 1AS4A 3LW2A 4AU4A 9APIA 2R9YA 2WXXA 3CVMA 3Q03A 4DY0A 4ROBA 1JRRA 2HI9A 4PYWA 2QUGA 1BY7A 1OPHA 3STOA 1HLEA 1OYHI 1EZXA 1JTIA 1IMVA 1ATUA 2B5TI 4Y40A 3T1PA 5IO1A 9PAIA 1SNGA 4P0FA 4DTEA 2RIWA 4IC0A 1DZHI 4R9IA 3DRUA 4AU3A 1DZGL 1LQ8A 1D5SA 2HIJL 3NE4A 5CE0A 1T1FA 4ZK3A 4EB1I 3EOXA 1SEKA 5INWA 5CDXA 2VDXA 4X30A 2ZV6A 3R4LA 2BEHI 1OO8A 1OVAA 1AZXI 2VDYA 1E03I 2B4XI 2D26A 1NQ9I 1E05I 1JMJA 2DUTA 1JMOA 1BR8I 1TB6I 1XQJA 3EVJI 3B9FI 4AJTA 4AQHA 1DVMA 3DY0A 1IZ2A 4G8OA 2H4RA 1PSIA 1DZHL 3DRMA 3ZHAA 2ZNHA 4AU3B 3NDDA 2H4QA 1E04I 4CAAA 1XU8A 2PEFA 3VVJA 3H5CA 4C49A 3CWLA 2WXZC 3F5NA 1ATHA 4IF8A 4P0OA 4BB2A 2WY1A 4C41A 1C5GA 1UHGA 2WXWA 3FGQA 2ANTI 2XN3A 1B3KA 3F1SA 4RSQA 1QMBA 2WXYC 2XN7A 1C8OA 2VH4A 1OYHL
chains in the Genus database with same CATH topology
3PB1I 2ARRA 2WY0C 3CWMA 3LE2A 1M93B 2ARQA 1DZGI 1R1LI 2HIJI 2ACHA 3Q02A 2XN6A 4YIAA 2XN5A 4Y3KA 1DB2A 7APIA 3OZQA 4EB1L 1LK6I 2H4PA 3NDAA 1KCTA 5EI0A 4ZK0A 1MTPA 2BEHL 1ANTI 1F0CA 2PEEA 4ROAA 4RO9A 2B4XL 3KCGI 1QLPA 1XQGA 1WZ9A 5BRRI 3F02A 1LJ5A 4DY7C 2GD4C 1OVAC 1OC0A 5CDZA 1OVAB 1QMNA 4AU2A 1HP7A 1K9OI 2OL2A 1JVQI 2V95A 3PZFA 1A7CA 3NDFA 4AFXA 3CAAA 2WXZA 4KDSA 1JJOC 4AJUA 3UT3A 2OAYA 4G8RA 8APIA 5C98A 3DLWA 4GA7A 5HGCA 1DVNA 1SR5A 1ATTA 1YXAA 2CEOA 2RIVA 1AS4A 3LW2A 4AU4A 9APIA 2R9YA 2WXXA 3CVMA 3Q03A 4DY0A 4ROBA 1JRRA 2HI9A 4PYWA 2QUGA 1BY7A 1OPHA 3STOA 1HLEA 1OYHI 1EZXA 1JTIA 1IMVA 1ATUA 2B5TI 4Y40A 3T1PA 5IO1A 9PAIA 1SNGA 4P0FA 4DTEA 2RIWA 4IC0A 1DZHI 4R9IA 3DRUA 4AU3A 1DZGL 1LQ8A 1D5SA 2HIJL 3NE4A 5CE0A 1T1FA 4ZK3A 4EB1I 3EOXA 1SEKA 5INWA 5CDXA 2VDXA 4X30A 2ZV6A 3R4LA 2BEHI 1OO8A 1OVAA 1AZXI 2VDYA 1E03I 2B4XI 2D26A 1NQ9I 1E05I 1JMJA 2DUTA 1JMOA 1BR8I 1TB6I 1XQJA 3EVJI 3B9FI 4AJTA 4AQHA 1DVMA 3DY0A 1IZ2A 4G8OA 2H4RA 1PSIA 1DZHL 3DRMA 3ZHAA 2ZNHA 4AU3B 3NDDA 2H4QA 1E04I 4CAAA 1XU8A 2PEFA 3VVJA 3H5CA 4C49A 3CWLA 2WXZC 3F5NA 1ATHA 4IF8A 4P0OA 4BB2A 2WY1A 4C41A 1C5GA 1UHGA 2WXWA 3FGQA 2ANTI 2XN3A 1B3KA 3F1SA 4RSQA 1QMBA 2WXYC 2XN7A 1C8OA 2VH4A 1OYHL
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PB1 I;  2ARR A;  2WY0 C;  3CWM A;  3LE2 A;  1M93 B;  2ARQ A;  1DZG I;  1R1L I;  2HIJ I;  2ACH A;  3Q02 A;  2XN6 A;  4YIA A;  2XN5 A;  4Y3K A;  1DB2 A;  7API A;  3OZQ A;  4EB1 L;  1LK6 I;  2H4P A;  3NDA A;  1KCT A;  5EI0 A;  4ZK0 A;  1MTP A;  2BEH L;  1ANT I;  1F0C A;  2PEE A;  4ROA A;  4RO9 A;  2B4X L;  3KCG I;  1QLP A;  1XQG A;  1WZ9 A;  5BRR I;  3F02 A;  1LJ5 A;  4DY7 C;  2GD4 C;  1OVA C;  1OC0 A;  5CDZ A;  1OVA B;  1QMN A;  4AU2 A;  1HP7 A;  1K9O I;  2OL2 A;  1JVQ I;  2V95 A;  3PZF A;  1A7C A;  3NDF A;  4AFX A;  3CAA A;  2WXZ A;  4KDS A;  1JJO C;  4AJU A;  3UT3 A;  2OAY A;  4G8R A;  8API A;  5C98 A;  3DLW A;  4GA7 A;  5HGC A;  1DVN A;  1SR5 A;  1ATT A;  1YXA A;  2CEO A;  2RIV A;  1AS4 A;  3LW2 A;  4AU4 A;  9API A;  2R9Y A;  2WXX A;  3CVM A;  3Q03 A;  4DY0 A;  4ROB A;  1JRR A;  2HI9 A;  4PYW A;  2QUG A;  1BY7 A;  1OPH A;  3STO A;  1HLE A;  1OYH I;  1EZX A;  1JTI A;  1IMV A;  1ATU A;  2B5T I;  4Y40 A;  3T1P A;  5IO1 A;  9PAI A;  1SNG A;  4P0F A;  4DTE A;  2RIW A;  4IC0 A;  1DZH I;  4R9I A;  3DRU A;  4AU3 A;  1DZG L;  1LQ8 A;  1D5S A;  2HIJ L;  3NE4 A;  5CE0 A;  1T1F A;  4ZK3 A;  4EB1 I;  3EOX A;  1SEK A;  5INW A;  5CDX A;  2VDX A;  4X30 A;  2ZV6 A;  3R4L A;  2BEH I;  1OO8 A;  1OVA A;  1AZX I;  2VDY A;  1E03 I;  2B4X I;  2D26 A;  1NQ9 I;  1E05 I;  1JMJ A;  2DUT A;  1JMO A;  1BR8 I;  1TB6 I;  1XQJ A;  3EVJ I;  3B9F I;  4AJT A;  4AQH A;  1DVM A;  3DY0 A;  1IZ2 A;  4G8O A;  2H4R A;  1PSI A;  1DZH L;  3DRM A;  3ZHA A;  2ZNH A;  4AU3 B;  3NDD A;  2H4Q A;  1E04 I;  4CAA A;  1XU8 A;  2PEF A;  3VVJ A;  3H5C A;  4C49 A;  3CWL A;  2WXZ C;  3F5N A;  1ATH A;  4IF8 A;  4P0O A;  4BB2 A;  2WY1 A;  4C41 A;  1C5G A;  1UHG A;  2WXW A;  3FGQ A;  2ANT I;  2XN3 A;  1B3K A;  3F1S A;  4RSQ A;  1QMB A;  2WXY C;  2XN7 A;  1C8O A;  2VH4 A;  1OYH L; 
#chains in the Genus database with same CATH topology
 3PB1 I;  2ARR A;  2WY0 C;  3CWM A;  3LE2 A;  1M93 B;  2ARQ A;  1DZG I;  1R1L I;  2HIJ I;  2ACH A;  3Q02 A;  2XN6 A;  4YIA A;  2XN5 A;  4Y3K A;  1DB2 A;  7API A;  3OZQ A;  4EB1 L;  1LK6 I;  2H4P A;  3NDA A;  1KCT A;  5EI0 A;  4ZK0 A;  1MTP A;  2BEH L;  1ANT I;  1F0C A;  2PEE A;  4ROA A;  4RO9 A;  2B4X L;  3KCG I;  1QLP A;  1XQG A;  1WZ9 A;  5BRR I;  3F02 A;  1LJ5 A;  4DY7 C;  2GD4 C;  1OVA C;  1OC0 A;  5CDZ A;  1OVA B;  1QMN A;  4AU2 A;  1HP7 A;  1K9O I;  2OL2 A;  1JVQ I;  2V95 A;  3PZF A;  1A7C A;  3NDF A;  4AFX A;  3CAA A;  2WXZ A;  4KDS A;  1JJO C;  4AJU A;  3UT3 A;  2OAY A;  4G8R A;  8API A;  5C98 A;  3DLW A;  4GA7 A;  5HGC A;  1DVN A;  1SR5 A;  1ATT A;  1YXA A;  2CEO A;  2RIV A;  1AS4 A;  3LW2 A;  4AU4 A;  9API A;  2R9Y A;  2WXX A;  3CVM A;  3Q03 A;  4DY0 A;  4ROB A;  1JRR A;  2HI9 A;  4PYW A;  2QUG A;  1BY7 A;  1OPH A;  3STO A;  1HLE A;  1OYH I;  1EZX A;  1JTI A;  1IMV A;  1ATU A;  2B5T I;  4Y40 A;  3T1P A;  5IO1 A;  9PAI A;  1SNG A;  4P0F A;  4DTE A;  2RIW A;  4IC0 A;  1DZH I;  4R9I A;  3DRU A;  4AU3 A;  1DZG L;  1LQ8 A;  1D5S A;  2HIJ L;  3NE4 A;  5CE0 A;  1T1F A;  4ZK3 A;  4EB1 I;  3EOX A;  1SEK A;  5INW A;  5CDX A;  2VDX A;  4X30 A;  2ZV6 A;  3R4L A;  2BEH I;  1OO8 A;  1OVA A;  1AZX I;  2VDY A;  1E03 I;  2B4X I;  2D26 A;  1NQ9 I;  1E05 I;  1JMJ A;  2DUT A;  1JMO A;  1BR8 I;  1TB6 I;  1XQJ A;  3EVJ I;  3B9F I;  4AJT A;  4AQH A;  1DVM A;  3DY0 A;  1IZ2 A;  4G8O A;  2H4R A;  1PSI A;  1DZH L;  3DRM A;  3ZHA A;  2ZNH A;  4AU3 B;  3NDD A;  2H4Q A;  1E04 I;  4CAA A;  1XU8 A;  2PEF A;  3VVJ A;  3H5C A;  4C49 A;  3CWL A;  2WXZ C;  3F5N A;  1ATH A;  4IF8 A;  4P0O A;  4BB2 A;  2WY1 A;  4C41 A;  1C5G A;  1UHG A;  2WXW A;  3FGQ A;  2ANT I;  2XN3 A;  1B3K A;  3F1S A;  4RSQ A;  1QMB A;  2WXY C;  2XN7 A;  1C8O A;  2VH4 A;  1OYH L; 
#chains in the Genus database with same CATH homology
 3PB1 I;  2ARR A;  2WY0 C;  3CWM A;  3LE2 A;  1M93 B;  2ARQ A;  1DZG I;  1R1L I;  2HIJ I;  2ACH A;  3Q02 A;  2XN6 A;  4YIA A;  2XN5 A;  4Y3K A;  1DB2 A;  7API A;  3OZQ A;  4EB1 L;  1LK6 I;  2H4P A;  3NDA A;  1KCT A;  5EI0 A;  4ZK0 A;  1MTP A;  2BEH L;  1ANT I;  1F0C A;  2PEE A;  4ROA A;  4RO9 A;  2B4X L;  3KCG I;  1QLP A;  1XQG A;  1WZ9 A;  5BRR I;  3F02 A;  1LJ5 A;  4DY7 C;  2GD4 C;  1OVA C;  1OC0 A;  5CDZ A;  1OVA B;  1QMN A;  4AU2 A;  1HP7 A;  1K9O I;  2OL2 A;  1JVQ I;  2V95 A;  3PZF A;  1A7C A;  3NDF A;  4AFX A;  3CAA A;  2WXZ A;  4KDS A;  1JJO C;  4AJU A;  3UT3 A;  2OAY A;  4G8R A;  8API A;  5C98 A;  3DLW A;  4GA7 A;  5HGC A;  1DVN A;  1SR5 A;  1ATT A;  1YXA A;  2CEO A;  2RIV A;  1AS4 A;  3LW2 A;  4AU4 A;  9API A;  2R9Y A;  2WXX A;  3CVM A;  3Q03 A;  4DY0 A;  4ROB A;  1JRR A;  2HI9 A;  4PYW A;  2QUG A;  1BY7 A;  1OPH A;  3STO A;  1HLE A;  1OYH I;  1EZX A;  1JTI A;  1IMV A;  1ATU A;  2B5T I;  4Y40 A;  3T1P A;  5IO1 A;  9PAI A;  1SNG A;  4P0F A;  4DTE A;  2RIW A;  4IC0 A;  1DZH I;  4R9I A;  3DRU A;  4AU3 A;  1DZG L;  1LQ8 A;  1D5S A;  2HIJ L;  3NE4 A;  5CE0 A;  1T1F A;  4ZK3 A;  4EB1 I;  3EOX A;  1SEK A;  5INW A;  5CDX A;  2VDX A;  4X30 A;  2ZV6 A;  3R4L A;  2BEH I;  1OO8 A;  1OVA A;  1AZX I;  2VDY A;  1E03 I;  2B4X I;  2D26 A;  1NQ9 I;  1E05 I;  1JMJ A;  2DUT A;  1JMO A;  1BR8 I;  1TB6 I;  1XQJ A;  3EVJ I;  3B9F I;  4AJT A;  4AQH A;  1DVM A;  3DY0 A;  1IZ2 A;  4G8O A;  2H4R A;  1PSI A;  1DZH L;  3DRM A;  3ZHA A;  2ZNH A;  4AU3 B;  3NDD A;  2H4Q A;  1E04 I;  4CAA A;  1XU8 A;  2PEF A;  3VVJ A;  3H5C A;  4C49 A;  3CWL A;  2WXZ C;  3F5N A;  1ATH A;  4IF8 A;  4P0O A;  4BB2 A;  2WY1 A;  4C41 A;  1C5G A;  1UHG A;  2WXW A;  3FGQ A;  2ANT I;  2XN3 A;  1B3K A;  3F1S A;  4RSQ A;  1QMB A;  2WXY C;  2XN7 A;  1C8O A;  2VH4 A;  1OYH L; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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