3AAXA

Crystal structure of probable thiosulfate sulfurtransferase cysa3 (rv3117) from mycobacterium tuberculosis: monoclinic form
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
274
structure length
272
Chain Sequence
CDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILAPAHLEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Putative thiosulfate sulfurtransferase
publication title The crystal structure of probable thiosulfate sulfurtransferase CysA3 (Rv3117) from Mycobacterium tuberculosis
rcsb
source organism Mycobacterium tuberculosis
total genus 86
structure length 272
sequence length 274
chains with identical sequence B
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2009-11-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3aaxA02
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3aaxA01
2EG3A 2WLRA 3IPPA 1TQ1A 1BOIA 5HPAA 1WV9A 3O3WA 3FLHA 3AAXA 1WHBA 5HBOA 3FS5A 2A2KA 3HIXA 2FSXA 2ORAA 1GN0A 5LAMA 1HZMA 3D1PA 1RHDA 4OCGA 2HHGA 3I2VA 3HWIA 2WLXA 3R2UA 2JTRA 1T3KA 2MOLA 3GK5A 1H4MX 5LAOA 5HBQA 3NTAA 4WH7A 1GMXA 2EG4A 1UARA 3FNJA 3TG3A 4F67A 1YMLA 3TP9A 3ICRA 3HZUA 2UZQA 3IPOA 3NT6A 3NHVA 3I3UA 3IWHA 3OP3A 4JGTA 1BOHA 1YS0A 3P3AA 1ORBA 3OLHA 1YM9A 3NTDA 1VEEA 1CWSA 1YT8A 1QB0A 3MZZA 1CWRA 1E0CA 1OKGA 2MRMA 3K9RA 1RHSA 1QXNA 1URHA 1DP2A 2K0ZA 2JTQA 3AAYA 2MOIA 3TG1B 1YMDA 2EG4B 5HBPA 3UTNX 2GWFA 2VSWA 2OUCA 2JTSA 3ILMA 1C25A 3F4AA 3ICTA 5HBLA 4WH9A 1YMKA 3FOJA 2IFDA 1H4KX 2J6PA 3G5JA 3ICSA 2DCQA 1CWTA 2IFVA 2KL3A
chains in the Genus database with same CATH superfamily
2EG3A 2WLRA 3IPPA 2Q82A 1TQ1A 1BOIA 5HPAA 1WV9A 3O3WA 3FLHA 3AAXA 1WHBA 5HBOA 3FS5A 2A2KA 3HIXA 2FSXA 2ORAA 1GN0A 5LAMA 1HZMA 3D1PA 1RHDA 4OCGA 2HHGA 3I2VA 3HWIA 2WLXA 3R2UA 2JTRA 1T3KA 2MOLA 3GK5A 1H4MX 5LAOA 5HBQA 3NTAA 4WH7A 1GMXA 2EG4A 1UARA 3FNJA 3TG3A 4F67A 1YMLA 3TP9A 3ICRA 3HZUA 2UZQA 3IPOA 3NT6A 3NHVA 3I3UA 3IWHA 3OP3A 4JGTA 1BOHA 1YS0A 3P3AA 1ORBA 3OLHA 1YM9A 3NTDA 1VEEA 1CWSA 1YT8A 1QB0A 3MZZA 1CWRA 1E0CA 1OKGA 2MRMA 3K9RA 1RHSA 1QXNA 1URHA 1DP2A 2K0ZA 2JTQA 3AAYA 2MOIA 3TG1B 1YMDA 2EG4B 5HBPA 3UTNX 2GWFA 2VSWA 2OUCA 2JTSA 3ILMA 1C25A 3F4AA 3ICTA 5HBLA 4WH9A 1YMKA 3FOJA 2IFDA 1H4KX 2J6PA 3G5JA 3ICSA 2DCQA 1CWTA 2IFVA 2KL3A
chains in the Genus database with same CATH topology
2EG3A 2WLRA 3IPPA 1TQ1A 1BOIA 5HPAA 1WV9A 3O3WA 3FLHA 3AAXA 1WHBA 5HBOA 3FS5A 2A2KA 3HIXA 2FSXA 2ORAA 1GN0A 5LAMA 1HZMA 3D1PA 1RHDA 4OCGA 2HHGA 3I2VA 3HWIA 2WLXA 3R2UA 2JTRA 1T3KA 2MOLA 3GK5A 1H4MX 5LAOA 5HBQA 3NTAA 4WH7A 1GMXA 2EG4A 1UARA 3FNJA 3TG3A 4F67A 1YMLA 3TP9A 3ICRA 3HZUA 2UZQA 3IPOA 3NT6A 3NHVA 3I3UA 3IWHA 3OP3A 4JGTA 1BOHA 1YS0A 3P3AA 1ORBA 3OLHA 1YM9A 3NTDA 1VEEA 1CWSA 1YT8A 1QB0A 3MZZA 1CWRA 1E0CA 1OKGA 2MRMA 3K9RA 1RHSA 1QXNA 1URHA 1DP2A 2K0ZA 2JTQA 3AAYA 2MOIA 3TG1B 1YMDA 2EG4B 5HBPA 3UTNX 2GWFA 2VSWA 2OUCA 2JTSA 3ILMA 1C25A 3F4AA 3ICTA 5HBLA 4WH9A 1YMKA 3FOJA 2IFDA 1H4KX 2J6PA 3G5JA 3ICSA 2DCQA 1CWTA 2IFVA 2KL3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EG3 A;  2WLR A;  3IPP A;  1TQ1 A;  1BOI A;  5HPA A;  1WV9 A;  3O3W A;  3FLH A;  3AAX A;  1WHB A;  5HBO A;  3FS5 A;  2A2K A;  3HIX A;  2FSX A;  2ORA A;  1GN0 A;  5LAM A;  1HZM A;  3D1P A;  1RHD A;  4OCG A;  2HHG A;  3I2V A;  3HWI A;  2WLX A;  3R2U A;  2JTR A;  1T3K A;  2MOL A;  3GK5 A;  1H4M X;  5LAO A;  5HBQ A;  3NTA A;  4WH7 A;  1GMX A;  2EG4 A;  1UAR A;  3FNJ A;  3TG3 A;  4F67 A;  1YML A;  3TP9 A;  3ICR A;  3HZU A;  2UZQ A;  3IPO A;  3NT6 A;  3NHV A;  3I3U A;  3IWH A;  3OP3 A;  4JGT A;  1BOH A;  1YS0 A;  3P3A A;  1ORB A;  3OLH A;  1YM9 A;  3NTD A;  1VEE A;  1CWS A;  1YT8 A;  1QB0 A;  3MZZ A;  1CWR A;  1E0C A;  1OKG A;  2MRM A;  3K9R A;  1RHS A;  1QXN A;  1URH A;  1DP2 A;  2K0Z A;  2JTQ A;  3AAY A;  2MOI A;  3TG1 B;  1YMD A;  2EG4 B;  5HBP A;  3UTN X;  2GWF A;  2VSW A;  2OUC A;  2JTS A;  3ILM A;  1C25 A;  3F4A A;  3ICT A;  5HBL A;  4WH9 A;  1YMK A;  3FOJ A;  2IFD A;  1H4K X;  2J6P A;  3G5J A;  3ICS A;  2DCQ A;  1CWT A;  2IFV A;  2KL3 A; 
#chains in the Genus database with same CATH topology
 2EG3 A;  2WLR A;  3IPP A;  2Q82 A;  1TQ1 A;  1BOI A;  5HPA A;  1WV9 A;  3O3W A;  3FLH A;  3AAX A;  1WHB A;  5HBO A;  3FS5 A;  2A2K A;  3HIX A;  2FSX A;  2ORA A;  1GN0 A;  5LAM A;  1HZM A;  3D1P A;  1RHD A;  4OCG A;  2HHG A;  3I2V A;  3HWI A;  2WLX A;  3R2U A;  2JTR A;  1T3K A;  2MOL A;  3GK5 A;  1H4M X;  5LAO A;  5HBQ A;  3NTA A;  4WH7 A;  1GMX A;  2EG4 A;  1UAR A;  3FNJ A;  3TG3 A;  4F67 A;  1YML A;  3TP9 A;  3ICR A;  3HZU A;  2UZQ A;  3IPO A;  3NT6 A;  3NHV A;  3I3U A;  3IWH A;  3OP3 A;  4JGT A;  1BOH A;  1YS0 A;  3P3A A;  1ORB A;  3OLH A;  1YM9 A;  3NTD A;  1VEE A;  1CWS A;  1YT8 A;  1QB0 A;  3MZZ A;  1CWR A;  1E0C A;  1OKG A;  2MRM A;  3K9R A;  1RHS A;  1QXN A;  1URH A;  1DP2 A;  2K0Z A;  2JTQ A;  3AAY A;  2MOI A;  3TG1 B;  1YMD A;  2EG4 B;  5HBP A;  3UTN X;  2GWF A;  2VSW A;  2OUC A;  2JTS A;  3ILM A;  1C25 A;  3F4A A;  3ICT A;  5HBL A;  4WH9 A;  1YMK A;  3FOJ A;  2IFD A;  1H4K X;  2J6P A;  3G5J A;  3ICS A;  2DCQ A;  1CWT A;  2IFV A;  2KL3 A; 
#chains in the Genus database with same CATH homology
 2EG3 A;  2WLR A;  3IPP A;  1TQ1 A;  1BOI A;  5HPA A;  1WV9 A;  3O3W A;  3FLH A;  3AAX A;  1WHB A;  5HBO A;  3FS5 A;  2A2K A;  3HIX A;  2FSX A;  2ORA A;  1GN0 A;  5LAM A;  1HZM A;  3D1P A;  1RHD A;  4OCG A;  2HHG A;  3I2V A;  3HWI A;  2WLX A;  3R2U A;  2JTR A;  1T3K A;  2MOL A;  3GK5 A;  1H4M X;  5LAO A;  5HBQ A;  3NTA A;  4WH7 A;  1GMX A;  2EG4 A;  1UAR A;  3FNJ A;  3TG3 A;  4F67 A;  1YML A;  3TP9 A;  3ICR A;  3HZU A;  2UZQ A;  3IPO A;  3NT6 A;  3NHV A;  3I3U A;  3IWH A;  3OP3 A;  4JGT A;  1BOH A;  1YS0 A;  3P3A A;  1ORB A;  3OLH A;  1YM9 A;  3NTD A;  1VEE A;  1CWS A;  1YT8 A;  1QB0 A;  3MZZ A;  1CWR A;  1E0C A;  1OKG A;  2MRM A;  3K9R A;  1RHS A;  1QXN A;  1URH A;  1DP2 A;  2K0Z A;  2JTQ A;  3AAY A;  2MOI A;  3TG1 B;  1YMD A;  2EG4 B;  5HBP A;  3UTN X;  2GWF A;  2VSW A;  2OUC A;  2JTS A;  3ILM A;  1C25 A;  3F4A A;  3ICT A;  5HBL A;  4WH9 A;  1YMK A;  3FOJ A;  2IFD A;  1H4K X;  2J6P A;  3G5J A;  3ICS A;  2DCQ A;  1CWT A;  2IFV A;  2KL3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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