3AAYA

Crystal structure of probable thiosulfate sulfurtransferase cysa3 (rv3117) from mycobacterium tuberculosis: orthorhombic form
Total Genus 92
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
92
sequence length
277
structure length
271
Chain Sequence
MARCDVLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIAGAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKNLIDVRSPDEFSGKILAQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEELAKLYADAGLDNSKETIAYRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELGS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Putative thiosulfate sulfurtransferase
publication title The crystal structure of probable thiosulfate sulfurtransferase CysA3 (Rv3117) from Mycobacterium tuberculosis
rcsb
source organism Mycobacterium tuberculosis
total genus 92
structure length 271
sequence length 277
chains with identical sequence B
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2009-11-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3aayA02
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3aayA01
5HBLA 1E0CA 2MOLA 5LAOA 2OUCA 3NTAA 1RHSA 2JTSA 2ORAA 3AAYA 2WLXA 3FLHA 1RHDA 5HBPA 2EG4B 3R2UA 3GK5A 3IPOA 3I3UA 4F67A 3K9RA 1VEEA 3ILMA 1HZMA 1H4MX 1YMLA 3TG3A 2VSWA 5HPAA 3NTDA 2J6PA 1WHBA 3F4AA 3D1PA 3HIXA 1C25A 3UTNX 1BOHA 3OP3A 3I2VA 1QXNA 5HBOA 2WLRA 2IFVA 3TG1B 2MOIA 5HBQA 1T3KA 1OKGA 1H4KX 2HHGA 1GN0A 4WH9A 1ORBA 3O3WA 1UARA 1CWRA 3ICRA 3FS5A 2EG4A 1CWSA 3ICSA 3NHVA 1YMDA 1URHA 4OCGA 3TP9A 3G5JA 1BOIA 3P3AA 2JTQA 3IPPA 4JGTA 2FSXA 2A2KA 2UZQA 3MZZA 3IWHA 2MRMA 3HWIA 1YT8A 3FNJA 2DCQA 4WH7A 1CWTA 3NT6A 2EG3A 2IFDA 3AAXA 5LAMA 3OLHA 3FOJA 1YS0A 1YMKA 2GWFA 2JTRA 1DP2A 3HZUA 1TQ1A 1YM9A 2KL3A 1WV9A 2K0ZA 1GMXA 1QB0A 3ICTA
chains in the Genus database with same CATH superfamily
5HBLA 1E0CA 2MOLA 5LAOA 2OUCA 3NTAA 1RHSA 2JTSA 2ORAA 3AAYA 2WLXA 3FLHA 1RHDA 5HBPA 2EG4B 3R2UA 3GK5A 3IPOA 3I3UA 4F67A 3K9RA 1VEEA 3ILMA 1HZMA 1H4MX 1YMLA 3TG3A 2VSWA 2Q82A 5HPAA 3NTDA 2J6PA 1WHBA 3F4AA 3D1PA 3HIXA 1C25A 3UTNX 1BOHA 3OP3A 3I2VA 1QXNA 5HBOA 2WLRA 2IFVA 3TG1B 2MOIA 5HBQA 1T3KA 1OKGA 1H4KX 2HHGA 1GN0A 4WH9A 1ORBA 3O3WA 1UARA 1CWRA 3ICRA 3FS5A 2EG4A 1CWSA 3ICSA 3NHVA 1YMDA 1URHA 4OCGA 3TP9A 3G5JA 1BOIA 3P3AA 2JTQA 3IPPA 4JGTA 2FSXA 2A2KA 2UZQA 3MZZA 3IWHA 2MRMA 3HWIA 1YT8A 3FNJA 2DCQA 4WH7A 1CWTA 3NT6A 2EG3A 2IFDA 3AAXA 5LAMA 3OLHA 3FOJA 1YS0A 1YMKA 2GWFA 2JTRA 1DP2A 3HZUA 1TQ1A 1YM9A 2KL3A 1WV9A 2K0ZA 1GMXA 1QB0A 3ICTA
chains in the Genus database with same CATH topology
5HBLA 1E0CA 2MOLA 5LAOA 2OUCA 3NTAA 1RHSA 2JTSA 2ORAA 3AAYA 2WLXA 3FLHA 1RHDA 5HBPA 2EG4B 3R2UA 3GK5A 3IPOA 3I3UA 4F67A 3K9RA 1VEEA 3ILMA 1HZMA 1H4MX 1YMLA 3TG3A 2VSWA 5HPAA 3NTDA 2J6PA 1WHBA 3F4AA 3D1PA 3HIXA 1C25A 3UTNX 1BOHA 3OP3A 3I2VA 1QXNA 5HBOA 2WLRA 2IFVA 3TG1B 2MOIA 5HBQA 1T3KA 1OKGA 1H4KX 2HHGA 1GN0A 4WH9A 1ORBA 3O3WA 1UARA 1CWRA 3ICRA 3FS5A 2EG4A 1CWSA 3ICSA 3NHVA 1YMDA 1URHA 4OCGA 3TP9A 3G5JA 1BOIA 3P3AA 2JTQA 3IPPA 4JGTA 2FSXA 2A2KA 2UZQA 3MZZA 3IWHA 2MRMA 3HWIA 1YT8A 3FNJA 2DCQA 4WH7A 1CWTA 3NT6A 2EG3A 2IFDA 3AAXA 5LAMA 3OLHA 3FOJA 1YS0A 1YMKA 2GWFA 2JTRA 1DP2A 3HZUA 1TQ1A 1YM9A 2KL3A 1WV9A 2K0ZA 1GMXA 1QB0A 3ICTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5HBL A;  1E0C A;  2MOL A;  5LAO A;  2OUC A;  3NTA A;  1RHS A;  2JTS A;  2ORA A;  3AAY A;  2WLX A;  3FLH A;  1RHD A;  5HBP A;  2EG4 B;  3R2U A;  3GK5 A;  3IPO A;  3I3U A;  4F67 A;  3K9R A;  1VEE A;  3ILM A;  1HZM A;  1H4M X;  1YML A;  3TG3 A;  2VSW A;  5HPA A;  3NTD A;  2J6P A;  1WHB A;  3F4A A;  3D1P A;  3HIX A;  1C25 A;  3UTN X;  1BOH A;  3OP3 A;  3I2V A;  1QXN A;  5HBO A;  2WLR A;  2IFV A;  3TG1 B;  2MOI A;  5HBQ A;  1T3K A;  1OKG A;  1H4K X;  2HHG A;  1GN0 A;  4WH9 A;  1ORB A;  3O3W A;  1UAR A;  1CWR A;  3ICR A;  3FS5 A;  2EG4 A;  1CWS A;  3ICS A;  3NHV A;  1YMD A;  1URH A;  4OCG A;  3TP9 A;  3G5J A;  1BOI A;  3P3A A;  2JTQ A;  3IPP A;  4JGT A;  2FSX A;  2A2K A;  2UZQ A;  3MZZ A;  3IWH A;  2MRM A;  3HWI A;  1YT8 A;  3FNJ A;  2DCQ A;  4WH7 A;  1CWT A;  3NT6 A;  2EG3 A;  2IFD A;  3AAX A;  5LAM A;  3OLH A;  3FOJ A;  1YS0 A;  1YMK A;  2GWF A;  2JTR A;  1DP2 A;  3HZU A;  1TQ1 A;  1YM9 A;  2KL3 A;  1WV9 A;  2K0Z A;  1GMX A;  1QB0 A;  3ICT A; 
#chains in the Genus database with same CATH topology
 5HBL A;  1E0C A;  2MOL A;  5LAO A;  2OUC A;  3NTA A;  1RHS A;  2JTS A;  2ORA A;  3AAY A;  2WLX A;  3FLH A;  1RHD A;  5HBP A;  2EG4 B;  3R2U A;  3GK5 A;  3IPO A;  3I3U A;  4F67 A;  3K9R A;  1VEE A;  3ILM A;  1HZM A;  1H4M X;  1YML A;  3TG3 A;  2VSW A;  2Q82 A;  5HPA A;  3NTD A;  2J6P A;  1WHB A;  3F4A A;  3D1P A;  3HIX A;  1C25 A;  3UTN X;  1BOH A;  3OP3 A;  3I2V A;  1QXN A;  5HBO A;  2WLR A;  2IFV A;  3TG1 B;  2MOI A;  5HBQ A;  1T3K A;  1OKG A;  1H4K X;  2HHG A;  1GN0 A;  4WH9 A;  1ORB A;  3O3W A;  1UAR A;  1CWR A;  3ICR A;  3FS5 A;  2EG4 A;  1CWS A;  3ICS A;  3NHV A;  1YMD A;  1URH A;  4OCG A;  3TP9 A;  3G5J A;  1BOI A;  3P3A A;  2JTQ A;  3IPP A;  4JGT A;  2FSX A;  2A2K A;  2UZQ A;  3MZZ A;  3IWH A;  2MRM A;  3HWI A;  1YT8 A;  3FNJ A;  2DCQ A;  4WH7 A;  1CWT A;  3NT6 A;  2EG3 A;  2IFD A;  3AAX A;  5LAM A;  3OLH A;  3FOJ A;  1YS0 A;  1YMK A;  2GWF A;  2JTR A;  1DP2 A;  3HZU A;  1TQ1 A;  1YM9 A;  2KL3 A;  1WV9 A;  2K0Z A;  1GMX A;  1QB0 A;  3ICT A; 
#chains in the Genus database with same CATH homology
 5HBL A;  1E0C A;  2MOL A;  5LAO A;  2OUC A;  3NTA A;  1RHS A;  2JTS A;  2ORA A;  3AAY A;  2WLX A;  3FLH A;  1RHD A;  5HBP A;  2EG4 B;  3R2U A;  3GK5 A;  3IPO A;  3I3U A;  4F67 A;  3K9R A;  1VEE A;  3ILM A;  1HZM A;  1H4M X;  1YML A;  3TG3 A;  2VSW A;  5HPA A;  3NTD A;  2J6P A;  1WHB A;  3F4A A;  3D1P A;  3HIX A;  1C25 A;  3UTN X;  1BOH A;  3OP3 A;  3I2V A;  1QXN A;  5HBO A;  2WLR A;  2IFV A;  3TG1 B;  2MOI A;  5HBQ A;  1T3K A;  1OKG A;  1H4K X;  2HHG A;  1GN0 A;  4WH9 A;  1ORB A;  3O3W A;  1UAR A;  1CWR A;  3ICR A;  3FS5 A;  2EG4 A;  1CWS A;  3ICS A;  3NHV A;  1YMD A;  1URH A;  4OCG A;  3TP9 A;  3G5J A;  1BOI A;  3P3A A;  2JTQ A;  3IPP A;  4JGT A;  2FSX A;  2A2K A;  2UZQ A;  3MZZ A;  3IWH A;  2MRM A;  3HWI A;  1YT8 A;  3FNJ A;  2DCQ A;  4WH7 A;  1CWT A;  3NT6 A;  2EG3 A;  2IFD A;  3AAX A;  5LAM A;  3OLH A;  3FOJ A;  1YS0 A;  1YMK A;  2GWF A;  2JTR A;  1DP2 A;  3HZU A;  1TQ1 A;  1YM9 A;  2KL3 A;  1WV9 A;  2K0Z A;  1GMX A;  1QB0 A;  3ICT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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