3AB2A

Crystal structure of aspartate kinase from corynebacterium glutamicum in complex with threonine
Total Genus 122
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
408
structure length
386
Chain Sequence
ALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLVTPGRVREALDEGKICIVAGFQGVLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQLGG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
pubmed doi rcsb
source organism Corynebacterium glutamicum
molecule tags Transferase
molecule keywords Aspartokinase
total genus 122
structure length 386
sequence length 408
chains with identical sequence C, E, G, I, K, M, O
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2009-11-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
A PF13840 ACT_7 ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.2130.10 Alpha Beta 2-Layer Sandwich VC0802-like VC0802-like 3ab2A02
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3ab2A01
3S6HA 4I49A 2R98A 2RD5A 3S6GA 3AB4A 2WXBA 1OHBA 3QVHA 3K56A 3QURA 3EK5A 3D41A 4NDPA 3TVIA 2V5HA 2J4JA 2BRIA 2J0XA 2X2WA 3S6KA 3LL9A 2J0WA 2V4YA 2R8VA 4NDRA 4NDQB 3B8GA 2BNFA 2BUFA 3AB2A 1OH9A 1GSJA 1Z9DA 3D2PA 4Q1TA 2JI5A 4KZTA 3LKKA 4NDOA 3C1NA 1YBDA 4F6TA 3C20A 4NDOB 3ZZGA 2J4KA 4NDQA 2VA1A 3ZZFA 2J5VA 2BTYA 4USJA 1ZVPA 3D2MA 2AP9A 3D40A 3KZFA 3L76A 2JJXA 2IJ9A 3NWYA 2HMFA 3U6UA 4A7WA 2E9YA 2A1FA 3QUNA 4A7XA 2F06A 3EK6A 3QUOA 3K4YA 2CDQA 2J5TA 2WE5A 2AKOA 3C1MA 3AAWA 4F6TB 4JZ7A 4NDPB 2BRXA 4AXSA 2WE4A 3WWNA 4JZ9A 1ZHVA 3ZZIA 4AB7A 2OGXB 1E19A 3L86A 2BMUA 4OLCA 4JZ8A 2JJ4A 2J4LA 3K52A 3WWMA 1GS5A 2BNDA 1OHAA 3ZZHA 3K4OA 3T7BA 3QVFA 2BNEA 3LL5A 4NDRB 1B7BA 2OGXA 2W21A
chains in the Genus database with same CATH superfamily
3S6HA 4I49A 2R98A 2RD5A 3S6GA 3AB4A 3TMAA 3TM4A 2WXBA 1OHBA 3QVHA 3K56A 3QURA 3EK5A 3D41A 3LDGA 4NDPA 3TVIA 2V5HA 2J4JA 2BRIA 2J0XA 2X2WA 3S6KA 3LL9A 2J0WA 2V4YA 2R8VA 3LDUA 4NDRA 4KR7A 4NDQB 3B8GA 2BNFA 3TM5A 2BUFA 3AB2A 1OH9A 1GSJA 1Z9DA 3D2PA 4KR6A 4Q1TA 2JI5A 4KZTA 3LKKA 4NDOA 3C1NA 1YBDA 4F6TA 3C20A 4NDOB 3ZZGA 2J4KA 4NDQA 3K0BA 3V8VA 2VA1A 3ZZFA 2J5VA 2BTYA 4USJA 1ZVPA 3D2MA 2AP9A 3D40A 3V97A 3KZFA 3L76A 2JJXA 2IJ9A 3NWYA 2HMFA 3U6UA 4A7WA 2E9YA 2A1FA 3QUNA 4A7XA 2F06A 3EK6A 3QUOA 3K4YA 2CDQA 2WE5A 2J5TA 4KR9A 3C1MA 3AAWA 2AKOA 4F6TB 4JZ7A 4NDPB 2BRXA 4AXSA 2WE4A 3TLJA 3WWNA 4JZ9A 1ZHVA 3ZZIA 4AB7A 2OGXB 1E19A 3L86A 2BMUA 4OLCA 4JZ8A 2JJ4A 2J4LA 3K52A 3WWMA 1GS5A 2BNDA 1OHAA 3ZZHA 2C5SA 3K4OA 3T7BA 3QVFA 2BNEA 3LL5A 4NDRB 1B7BA 2OGXA 2W21A
chains in the Genus database with same CATH topology
3S6HA 4I49A 2R98A 2RD5A 3S6GA 3AB4A 3TMAA 3TM4A 2WXBA 1OHBA 3QVHA 3K56A 3QURA 3EK5A 3D41A 3LDGA 4NDPA 3TVIA 2V5HA 2J4JA 2BRIA 2J0XA 2X2WA 3S6KA 3LL9A 2J0WA 2V4YA 2R8VA 3LDUA 4NDRA 4KR7A 4NDQB 3B8GA 2BNFA 3TM5A 2BUFA 3AB2A 1OH9A 1GSJA 1Z9DA 3D2PA 4KR6A 4Q1TA 2JI5A 4KZTA 3LKKA 4NDOA 3C1NA 1YBDA 4F6TA 3C20A 4NDOB 3ZZGA 2J4KA 4NDQA 3K0BA 3V8VA 2VA1A 3ZZFA 2J5VA 2BTYA 4USJA 1ZVPA 3D2MA 2AP9A 3D40A 3V97A 3KZFA 3L76A 2JJXA 2IJ9A 3NWYA 2HMFA 3U6UA 4A7WA 2E9YA 2A1FA 3QUNA 4A7XA 2F06A 3EK6A 3QUOA 3K4YA 2CDQA 2WE5A 2J5TA 4KR9A 3C1MA 3AAWA 2AKOA 4F6TB 4JZ7A 4NDPB 2BRXA 4AXSA 2WE4A 3TLJA 3WWNA 4JZ9A 1ZHVA 3ZZIA 4AB7A 2OGXB 1E19A 3L86A 2BMUA 4OLCA 4JZ8A 2JJ4A 2J4LA 3K52A 3WWMA 1GS5A 2BNDA 1OHAA 3ZZHA 2C5SA 3K4OA 3T7BA 3QVFA 2BNEA 3LL5A 4NDRB 1B7BA 2OGXA 2W21A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S6H A;  4I49 A;  2R98 A;  2RD5 A;  3S6G A;  3AB4 A;  2WXB A;  1OHB A;  3QVH A;  3K56 A;  3QUR A;  3EK5 A;  3D41 A;  4NDP A;  3TVI A;  2V5H A;  2J4J A;  2BRI A;  2J0X A;  2X2W A;  3S6K A;  3LL9 A;  2J0W A;  2V4Y A;  2R8V A;  4NDR A;  4NDQ B;  3B8G A;  2BNF A;  2BUF A;  3AB2 A;  1OH9 A;  1GSJ A;  1Z9D A;  3D2P A;  4Q1T A;  2JI5 A;  4KZT A;  3LKK A;  4NDO A;  3C1N A;  1YBD A;  4F6T A;  3C20 A;  4NDO B;  3ZZG A;  2J4K A;  4NDQ A;  2VA1 A;  3ZZF A;  2J5V A;  2BTY A;  4USJ A;  1ZVP A;  3D2M A;  2AP9 A;  3D40 A;  3KZF A;  3L76 A;  2JJX A;  2IJ9 A;  3NWY A;  2HMF A;  3U6U A;  4A7W A;  2E9Y A;  2A1F A;  3QUN A;  4A7X A;  2F06 A;  3EK6 A;  3QUO A;  3K4Y A;  2CDQ A;  2J5T A;  2WE5 A;  2AKO A;  3C1M A;  3AAW A;  4F6T B;  4JZ7 A;  4NDP B;  2BRX A;  4AXS A;  2WE4 A;  3WWN A;  4JZ9 A;  1ZHV A;  3ZZI A;  4AB7 A;  2OGX B;  1E19 A;  3L86 A;  2BMU A;  4OLC A;  4JZ8 A;  2JJ4 A;  2J4L A;  3K52 A;  3WWM A;  1GS5 A;  2BND A;  1OHA A;  3ZZH A;  3K4O A;  3T7B A;  3QVF A;  2BNE A;  3LL5 A;  4NDR B;  1B7B A;  2OGX A;  2W21 A; 
#chains in the Genus database with same CATH topology
 3S6H A;  4I49 A;  2R98 A;  2RD5 A;  3S6G A;  3AB4 A;  3TMA A;  3TM4 A;  2WXB A;  1OHB A;  3QVH A;  3K56 A;  3QUR A;  3EK5 A;  3D41 A;  3LDG A;  4NDP A;  3TVI A;  2V5H A;  2J4J A;  2BRI A;  2J0X A;  2X2W A;  3S6K A;  3LL9 A;  2J0W A;  2V4Y A;  2R8V A;  3LDU A;  4NDR A;  4KR7 A;  4NDQ B;  3B8G A;  2BNF A;  3TM5 A;  2BUF A;  3AB2 A;  1OH9 A;  1GSJ A;  1Z9D A;  3D2P A;  4KR6 A;  4Q1T A;  2JI5 A;  4KZT A;  3LKK A;  4NDO A;  3C1N A;  1YBD A;  4F6T A;  3C20 A;  4NDO B;  3ZZG A;  2J4K A;  4NDQ A;  3K0B A;  3V8V A;  2VA1 A;  3ZZF A;  2J5V A;  2BTY A;  4USJ A;  1ZVP A;  3D2M A;  2AP9 A;  3D40 A;  3V97 A;  3KZF A;  3L76 A;  2JJX A;  2IJ9 A;  3NWY A;  2HMF A;  3U6U A;  4A7W A;  2E9Y A;  2A1F A;  3QUN A;  4A7X A;  2F06 A;  3EK6 A;  3QUO A;  3K4Y A;  2CDQ A;  2WE5 A;  2J5T A;  4KR9 A;  3C1M A;  3AAW A;  2AKO A;  4F6T B;  4JZ7 A;  4NDP B;  2BRX A;  4AXS A;  2WE4 A;  3TLJ A;  3WWN A;  4JZ9 A;  1ZHV A;  3ZZI A;  4AB7 A;  2OGX B;  1E19 A;  3L86 A;  2BMU A;  4OLC A;  4JZ8 A;  2JJ4 A;  2J4L A;  3K52 A;  3WWM A;  1GS5 A;  2BND A;  1OHA A;  3ZZH A;  2C5S A;  3K4O A;  3T7B A;  3QVF A;  2BNE A;  3LL5 A;  4NDR B;  1B7B A;  2OGX A;  2W21 A; 
#chains in the Genus database with same CATH homology
 3S6H A;  4I49 A;  2R98 A;  2RD5 A;  3S6G A;  3AB4 A;  3TMA A;  3TM4 A;  2WXB A;  1OHB A;  3QVH A;  3K56 A;  3QUR A;  3EK5 A;  3D41 A;  3LDG A;  4NDP A;  3TVI A;  2V5H A;  2J4J A;  2BRI A;  2J0X A;  2X2W A;  3S6K A;  3LL9 A;  2J0W A;  2V4Y A;  2R8V A;  3LDU A;  4NDR A;  4KR7 A;  4NDQ B;  3B8G A;  2BNF A;  3TM5 A;  2BUF A;  3AB2 A;  1OH9 A;  1GSJ A;  1Z9D A;  3D2P A;  4KR6 A;  4Q1T A;  2JI5 A;  4KZT A;  3LKK A;  4NDO A;  3C1N A;  1YBD A;  4F6T A;  3C20 A;  4NDO B;  3ZZG A;  2J4K A;  4NDQ A;  3K0B A;  3V8V A;  2VA1 A;  3ZZF A;  2J5V A;  2BTY A;  4USJ A;  1ZVP A;  3D2M A;  2AP9 A;  3D40 A;  3V97 A;  3KZF A;  3L76 A;  2JJX A;  2IJ9 A;  3NWY A;  2HMF A;  3U6U A;  4A7W A;  2E9Y A;  2A1F A;  3QUN A;  4A7X A;  2F06 A;  3EK6 A;  3QUO A;  3K4Y A;  2CDQ A;  2WE5 A;  2J5T A;  4KR9 A;  3C1M A;  3AAW A;  2AKO A;  4F6T B;  4JZ7 A;  4NDP B;  2BRX A;  4AXS A;  2WE4 A;  3TLJ A;  3WWN A;  4JZ9 A;  1ZHV A;  3ZZI A;  4AB7 A;  2OGX B;  1E19 A;  3L86 A;  2BMU A;  4OLC A;  4JZ8 A;  2JJ4 A;  2J4L A;  3K52 A;  3WWM A;  1GS5 A;  2BND A;  1OHA A;  3ZZH A;  2C5S A;  3K4O A;  3T7B A;  3QVF A;  2BNE A;  3LL5 A;  4NDR B;  1B7B A;  2OGX A;  2W21 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...