3AB2A

Crystal structure of aspartate kinase from corynebacterium glutamicum in complex with threonine
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
408
structure length
386
Chain Sequence
b'ALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLVTPGRVREALDEGKICIVAGFQGVLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQLGG'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Aspartokinase
publication title Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
pubmed doi rcsb
source organism Corynebacterium glutamicum
molecule tags Transferase
total genus 122
structure length 386
sequence length 408
chains with identical sequence C, E, G, I, K, M, O
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2009-11-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
A PF13840 ACT_7 ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.2130.10 Alpha Beta 2-Layer Sandwich VC0802-like VC0802-like 3ab2A02
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3ab2A01
2RD5A 3AAWA 3AB4A 2BUFA 4NDQB 3ZZFA 3WWMA 3B8GA 2J5VA 2R98A 3QVHA 3EK5A 3LL9A 4AB7A 4KZTA 1OHAA 2HMFA 1YBDA 2JI5A 2AKOA 3S6HA 2R8VA 4NDRB 1ZHVA 4NDQA 3QUOA 3NWYA 2E9YA 1E19A 3EK6A 3K56A 3K52A 1OHBA 4NDRA 3WWNA 3QVFA 1GSJA 2WE5A 2W21A 2V4YA 3U6UA 2J0XA 4A7WA 1B7BA 2WXBA 2J5TA 3ZZHA 4OLCA 1OH9A 2BTYA 3T7BA 3QURA 2IJ9A 2J0WA 4AXSA 3D41A 2CDQA 3D2MA 2AP9A 3TVIA 2J4LA 3LKKA 2JJXA 2V5HA 3ZZIA 4JZ8A 2J4KA 2BNFA 3C20A 2WE4A 2BMUA 2J4JA 2X2WA 3ZZGA 3KZFA 2BNEA 3D2PA 2BRIA 4NDPB 2OGXB 3C1MA 3S6KA 4JZ7A 2BNDA 3LL5A 2VA1A 3K4YA 4NDOB 3AB2A 3QUNA 3C1NA 1GS5A 3K4OA 2A1FA 4Q1TA 3L86A 4F6TA 4NDPA 4USJA 2OGXA 2F06A 4I49A 3D40A 1Z9DA 4A7XA 1ZVPA 2BRXA 4JZ9A 2JJ4A 3L76A 4F6TB 4NDOA 3S6GA
chains in the Genus database with same CATH superfamily
2RD5A 3AAWA 3K0BA 3AB4A 2BUFA 4NDQB 3ZZFA 3WWMA 3B8GA 2J5VA 2R98A 3QVHA 3EK5A 3LL9A 4AB7A 4KZTA 1OHAA 2HMFA 1YBDA 2JI5A 2AKOA 3S6HA 2R8VA 4NDRB 1ZHVA 4NDQA 3TM5A 3QUOA 3NWYA 2E9YA 1E19A 3EK6A 3LDGA 3K56A 3K52A 1OHBA 4NDRA 3WWNA 3TM4A 3QVFA 1GSJA 2WE5A 3V8VA 2W21A 2V4YA 3U6UA 2J0XA 4A7WA 1B7BA 2WXBA 3LDUA 2J5TA 3ZZHA 4OLCA 1OH9A 2BTYA 3T7BA 3QURA 2IJ9A 2J0WA 4AXSA 3D41A 2CDQA 3D2MA 2AP9A 3TVIA 2J4LA 3LKKA 2JJXA 2V5HA 3ZZIA 4JZ8A 3TMAA 2J4KA 2BNFA 3C20A 2WE4A 3TLJA 2BMUA 2J4JA 3V97A 2X2WA 3ZZGA 3KZFA 2BNEA 4KR9A 3D2PA 2BRIA 4NDPB 2OGXB 3C1MA 3S6KA 2C5SA 4JZ7A 2BNDA 3LL5A 2VA1A 4KR6A 3K4YA 4NDOB 3AB2A 3QUNA 3C1NA 1GS5A 3K4OA 2A1FA 4Q1TA 3L86A 4F6TA 4NDPA 4USJA 2OGXA 2F06A 4KR7A 4I49A 3D40A 1Z9DA 4A7XA 1ZVPA 2BRXA 4JZ9A 2JJ4A 3L76A 4F6TB 4NDOA 3S6GA
chains in the Genus database with same CATH topology
2RD5A 3AAWA 3K0BA 3AB4A 2BUFA 4NDQB 3ZZFA 3WWMA 3B8GA 2J5VA 2R98A 3QVHA 3EK5A 3LL9A 4AB7A 4KZTA 1OHAA 2HMFA 1YBDA 2JI5A 2AKOA 3S6HA 2R8VA 4NDRB 1ZHVA 4NDQA 3TM5A 3QUOA 3NWYA 2E9YA 1E19A 3EK6A 3LDGA 3K56A 3K52A 1OHBA 4NDRA 3WWNA 3TM4A 3QVFA 1GSJA 2WE5A 3V8VA 2W21A 2V4YA 3U6UA 2J0XA 4A7WA 1B7BA 2WXBA 3LDUA 2J5TA 3ZZHA 4OLCA 1OH9A 2BTYA 3T7BA 3QURA 2IJ9A 2J0WA 4AXSA 3D41A 2CDQA 3D2MA 2AP9A 3TVIA 2J4LA 3LKKA 2JJXA 2V5HA 3ZZIA 4JZ8A 3TMAA 2J4KA 2BNFA 3C20A 2WE4A 3TLJA 2BMUA 2J4JA 3V97A 2X2WA 3ZZGA 3KZFA 2BNEA 4KR9A 3D2PA 2BRIA 4NDPB 2OGXB 3C1MA 3S6KA 2C5SA 4JZ7A 2BNDA 3LL5A 2VA1A 4KR6A 3K4YA 4NDOB 3AB2A 3QUNA 3C1NA 1GS5A 3K4OA 2A1FA 4Q1TA 3L86A 4F6TA 4NDPA 4USJA 2OGXA 2F06A 4KR7A 4I49A 3D40A 1Z9DA 4A7XA 1ZVPA 2BRXA 4JZ9A 2JJ4A 3L76A 4F6TB 4NDOA 3S6GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RD5 A;  3AAW A;  3AB4 A;  2BUF A;  4NDQ B;  3ZZF A;  3WWM A;  3B8G A;  2J5V A;  2R98 A;  3QVH A;  3EK5 A;  3LL9 A;  4AB7 A;  4KZT A;  1OHA A;  2HMF A;  1YBD A;  2JI5 A;  2AKO A;  3S6H A;  2R8V A;  4NDR B;  1ZHV A;  4NDQ A;  3QUO A;  3NWY A;  2E9Y A;  1E19 A;  3EK6 A;  3K56 A;  3K52 A;  1OHB A;  4NDR A;  3WWN A;  3QVF A;  1GSJ A;  2WE5 A;  2W21 A;  2V4Y A;  3U6U A;  2J0X A;  4A7W A;  1B7B A;  2WXB A;  2J5T A;  3ZZH A;  4OLC A;  1OH9 A;  2BTY A;  3T7B A;  3QUR A;  2IJ9 A;  2J0W A;  4AXS A;  3D41 A;  2CDQ A;  3D2M A;  2AP9 A;  3TVI A;  2J4L A;  3LKK A;  2JJX A;  2V5H A;  3ZZI A;  4JZ8 A;  2J4K A;  2BNF A;  3C20 A;  2WE4 A;  2BMU A;  2J4J A;  2X2W A;  3ZZG A;  3KZF A;  2BNE A;  3D2P A;  2BRI A;  4NDP B;  2OGX B;  3C1M A;  3S6K A;  4JZ7 A;  2BND A;  3LL5 A;  2VA1 A;  3K4Y A;  4NDO B;  3AB2 A;  3QUN A;  3C1N A;  1GS5 A;  3K4O A;  2A1F A;  4Q1T A;  3L86 A;  4F6T A;  4NDP A;  4USJ A;  2OGX A;  2F06 A;  4I49 A;  3D40 A;  1Z9D A;  4A7X A;  1ZVP A;  2BRX A;  4JZ9 A;  2JJ4 A;  3L76 A;  4F6T B;  4NDO A;  3S6G A; 
#chains in the Genus database with same CATH topology
 2RD5 A;  3AAW A;  3K0B A;  3AB4 A;  2BUF A;  4NDQ B;  3ZZF A;  3WWM A;  3B8G A;  2J5V A;  2R98 A;  3QVH A;  3EK5 A;  3LL9 A;  4AB7 A;  4KZT A;  1OHA A;  2HMF A;  1YBD A;  2JI5 A;  2AKO A;  3S6H A;  2R8V A;  4NDR B;  1ZHV A;  4NDQ A;  3TM5 A;  3QUO A;  3NWY A;  2E9Y A;  1E19 A;  3EK6 A;  3LDG A;  3K56 A;  3K52 A;  1OHB A;  4NDR A;  3WWN A;  3TM4 A;  3QVF A;  1GSJ A;  2WE5 A;  3V8V A;  2W21 A;  2V4Y A;  3U6U A;  2J0X A;  4A7W A;  1B7B A;  2WXB A;  3LDU A;  2J5T A;  3ZZH A;  4OLC A;  1OH9 A;  2BTY A;  3T7B A;  3QUR A;  2IJ9 A;  2J0W A;  4AXS A;  3D41 A;  2CDQ A;  3D2M A;  2AP9 A;  3TVI A;  2J4L A;  3LKK A;  2JJX A;  2V5H A;  3ZZI A;  4JZ8 A;  3TMA A;  2J4K A;  2BNF A;  3C20 A;  2WE4 A;  3TLJ A;  2BMU A;  2J4J A;  3V97 A;  2X2W A;  3ZZG A;  3KZF A;  2BNE A;  4KR9 A;  3D2P A;  2BRI A;  4NDP B;  2OGX B;  3C1M A;  3S6K A;  2C5S A;  4JZ7 A;  2BND A;  3LL5 A;  2VA1 A;  4KR6 A;  3K4Y A;  4NDO B;  3AB2 A;  3QUN A;  3C1N A;  1GS5 A;  3K4O A;  2A1F A;  4Q1T A;  3L86 A;  4F6T A;  4NDP A;  4USJ A;  2OGX A;  2F06 A;  4KR7 A;  4I49 A;  3D40 A;  1Z9D A;  4A7X A;  1ZVP A;  2BRX A;  4JZ9 A;  2JJ4 A;  3L76 A;  4F6T B;  4NDO A;  3S6G A; 
#chains in the Genus database with same CATH homology
 2RD5 A;  3AAW A;  3K0B A;  3AB4 A;  2BUF A;  4NDQ B;  3ZZF A;  3WWM A;  3B8G A;  2J5V A;  2R98 A;  3QVH A;  3EK5 A;  3LL9 A;  4AB7 A;  4KZT A;  1OHA A;  2HMF A;  1YBD A;  2JI5 A;  2AKO A;  3S6H A;  2R8V A;  4NDR B;  1ZHV A;  4NDQ A;  3TM5 A;  3QUO A;  3NWY A;  2E9Y A;  1E19 A;  3EK6 A;  3LDG A;  3K56 A;  3K52 A;  1OHB A;  4NDR A;  3WWN A;  3TM4 A;  3QVF A;  1GSJ A;  2WE5 A;  3V8V A;  2W21 A;  2V4Y A;  3U6U A;  2J0X A;  4A7W A;  1B7B A;  2WXB A;  3LDU A;  2J5T A;  3ZZH A;  4OLC A;  1OH9 A;  2BTY A;  3T7B A;  3QUR A;  2IJ9 A;  2J0W A;  4AXS A;  3D41 A;  2CDQ A;  3D2M A;  2AP9 A;  3TVI A;  2J4L A;  3LKK A;  2JJX A;  2V5H A;  3ZZI A;  4JZ8 A;  3TMA A;  2J4K A;  2BNF A;  3C20 A;  2WE4 A;  3TLJ A;  2BMU A;  2J4J A;  3V97 A;  2X2W A;  3ZZG A;  3KZF A;  2BNE A;  4KR9 A;  3D2P A;  2BRI A;  4NDP B;  2OGX B;  3C1M A;  3S6K A;  2C5S A;  4JZ7 A;  2BND A;  3LL5 A;  2VA1 A;  4KR6 A;  3K4Y A;  4NDO B;  3AB2 A;  3QUN A;  3C1N A;  1GS5 A;  3K4O A;  2A1F A;  4Q1T A;  3L86 A;  4F6T A;  4NDP A;  4USJ A;  2OGX A;  2F06 A;  4KR7 A;  4I49 A;  3D40 A;  1Z9D A;  4A7X A;  1ZVP A;  2BRX A;  4JZ9 A;  2JJ4 A;  3L76 A;  4F6T B;  4NDO A;  3S6G A; 
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