3AB2A

Crystal structure of aspartate kinase from corynebacterium glutamicum in complex with threonine
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
408
structure length
386
Chain Sequence
ALVVQKYGGSSLESAERIRNVAERIVATKKAGNDVVVVCSAMGDTTDELLELAAAVNPVPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLVTPGRVREALDEGKICIVAGFQGVLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYSNDPGTLIAGSMEDIPVEEAVLTGVATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVGNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTSEIRISVLIREDDLDAAARALHEQFQLGG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Aspartokinase
publication title Mechanism of concerted inhibition of {alpha}2{beta}2-type heterooligomeric aspartate kinase from Corynebacterium glutamicum
pubmed doi rcsb
source organism Corynebacterium glutamicum
molecule tags Transferase
total genus 122
structure length 386
sequence length 408
chains with identical sequence C, E, G, I, K, M, O
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2009-11-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
A PF13840 ACT_7 ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.2130.10 Alpha Beta 2-Layer Sandwich VC0802-like VC0802-like 3ab2A02
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3ab2A01
2RD5A 2JJXA 2BNFA 3L76A 3QUNA 1ZVPA 4NDRA 4NDQA 2BRIA 4NDOA 3KZFA 3AAWA 2J4JA 3B8GA 3U6UA 3ZZGA 3ZZIA 3LL9A 2E9YA 1Z9DA 2OGXA 3D41A 3K56A 2J0XA 4Q1TA 2WE4A 3ZZFA 4F6TA 2BTYA 2J5TA 3K4YA 3EK6A 3QVFA 2WE5A 3L86A 2J5VA 4OLCA 2J4LA 3QURA 2VA1A 1E19A 4NDRB 4NDQB 3AB2A 4NDOB 2BNDA 2IJ9A 2V5HA 3D2PA 3D40A 4AB7A 2HMFA 3NWYA 4JZ7A 2WXBA 2V4YA 2JJ4A 2OGXB 4NDPB 3S6HA 1OHBA 3QUOA 4KZTA 2AP9A 3WWMA 4USJA 3LL5A 4F6TB 3EK5A 3S6GA 2W21A 1GSJA 4JZ9A 3T7BA 2BMUA 2A1FA 3C20A 1B7BA 2R98A 1OH9A 2BUFA 1GS5A 2AKOA 4AXSA 2CDQA 3K52A 3D2MA 3K4OA 4JZ8A 3QVHA 3TVIA 4I49A 2R8VA 2X2WA 1YBDA 2J4KA 2BNEA 2BRXA 3C1NA 4NDPA 3S6KA 3LKKA 1OHAA 3ZZHA 3AB4A 3WWNA 2F06A 4A7WA 1ZHVA 3C1MA 2JI5A 2J0WA 4A7XA
chains in the Genus database with same CATH superfamily
2RD5A 3LDUA 4KR9A 3TM4A 2JJXA 2BNFA 3L76A 3QUNA 1ZVPA 4NDRA 4NDQA 2BRIA 4NDOA 3KZFA 3AAWA 2J4JA 3B8GA 3U6UA 3V8VA 3K0BA 3ZZGA 3ZZIA 3LL9A 2E9YA 1Z9DA 2OGXA 3D41A 3K56A 2J0XA 4Q1TA 2WE4A 3ZZFA 4F6TA 2BTYA 2J5TA 3K4YA 3EK6A 3QVFA 2WE5A 3L86A 2J5VA 4OLCA 2J4LA 3QURA 2VA1A 3LDGA 1E19A 4NDRB 4NDQB 3AB2A 4NDOB 2BNDA 2IJ9A 2V5HA 3D2PA 3D40A 4AB7A 2HMFA 3NWYA 4JZ7A 2WXBA 2V4YA 2JJ4A 4KR6A 2OGXB 4NDPB 3S6HA 1OHBA 3QUOA 4KZTA 2AP9A 3WWMA 4USJA 3LL5A 4F6TB 3EK5A 3S6GA 2W21A 1GSJA 3TM5A 2C5SA 4JZ9A 3T7BA 2BMUA 3TMAA 2A1FA 3C20A 1B7BA 4KR7A 2R98A 1OH9A 2BUFA 1GS5A 2AKOA 4AXSA 2CDQA 3K52A 3D2MA 3K4OA 4JZ8A 3QVHA 3TVIA 4I49A 2R8VA 2X2WA 3TLJA 1YBDA 2J4KA 2BNEA 2BRXA 3C1NA 3V97A 4NDPA 3S6KA 3LKKA 1OHAA 3ZZHA 3AB4A 3WWNA 2F06A 4A7WA 1ZHVA 3C1MA 2JI5A 2J0WA 4A7XA
chains in the Genus database with same CATH topology
2RD5A 3LDUA 4KR9A 3TM4A 2JJXA 2BNFA 3L76A 3QUNA 1ZVPA 4NDRA 4NDQA 2BRIA 4NDOA 3KZFA 3AAWA 2J4JA 3B8GA 3U6UA 3V8VA 3K0BA 3ZZGA 3ZZIA 3LL9A 2E9YA 1Z9DA 2OGXA 3D41A 3K56A 2J0XA 4Q1TA 2WE4A 3ZZFA 4F6TA 2BTYA 2J5TA 3K4YA 3EK6A 3QVFA 2WE5A 3L86A 2J5VA 4OLCA 2J4LA 3QURA 2VA1A 3LDGA 1E19A 4NDRB 4NDQB 3AB2A 4NDOB 2BNDA 2IJ9A 2V5HA 3D2PA 3D40A 4AB7A 2HMFA 3NWYA 4JZ7A 2WXBA 2V4YA 2JJ4A 4KR6A 2OGXB 4NDPB 3S6HA 1OHBA 3QUOA 4KZTA 2AP9A 3WWMA 4USJA 3LL5A 4F6TB 3EK5A 3S6GA 2W21A 1GSJA 3TM5A 2C5SA 4JZ9A 3T7BA 2BMUA 3TMAA 2A1FA 3C20A 1B7BA 4KR7A 2R98A 1OH9A 2BUFA 1GS5A 2AKOA 4AXSA 2CDQA 3K52A 3D2MA 3K4OA 4JZ8A 3QVHA 3TVIA 4I49A 2R8VA 2X2WA 3TLJA 1YBDA 2J4KA 2BNEA 2BRXA 3C1NA 3V97A 4NDPA 3S6KA 3LKKA 1OHAA 3ZZHA 3AB4A 3WWNA 2F06A 4A7WA 1ZHVA 3C1MA 2JI5A 2J0WA 4A7XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RD5 A;  2JJX A;  2BNF A;  3L76 A;  3QUN A;  1ZVP A;  4NDR A;  4NDQ A;  2BRI A;  4NDO A;  3KZF A;  3AAW A;  2J4J A;  3B8G A;  3U6U A;  3ZZG A;  3ZZI A;  3LL9 A;  2E9Y A;  1Z9D A;  2OGX A;  3D41 A;  3K56 A;  2J0X A;  4Q1T A;  2WE4 A;  3ZZF A;  4F6T A;  2BTY A;  2J5T A;  3K4Y A;  3EK6 A;  3QVF A;  2WE5 A;  3L86 A;  2J5V A;  4OLC A;  2J4L A;  3QUR A;  2VA1 A;  1E19 A;  4NDR B;  4NDQ B;  3AB2 A;  4NDO B;  2BND A;  2IJ9 A;  2V5H A;  3D2P A;  3D40 A;  4AB7 A;  2HMF A;  3NWY A;  4JZ7 A;  2WXB A;  2V4Y A;  2JJ4 A;  2OGX B;  4NDP B;  3S6H A;  1OHB A;  3QUO A;  4KZT A;  2AP9 A;  3WWM A;  4USJ A;  3LL5 A;  4F6T B;  3EK5 A;  3S6G A;  2W21 A;  1GSJ A;  4JZ9 A;  3T7B A;  2BMU A;  2A1F A;  3C20 A;  1B7B A;  2R98 A;  1OH9 A;  2BUF A;  1GS5 A;  2AKO A;  4AXS A;  2CDQ A;  3K52 A;  3D2M A;  3K4O A;  4JZ8 A;  3QVH A;  3TVI A;  4I49 A;  2R8V A;  2X2W A;  1YBD A;  2J4K A;  2BNE A;  2BRX A;  3C1N A;  4NDP A;  3S6K A;  3LKK A;  1OHA A;  3ZZH A;  3AB4 A;  3WWN A;  2F06 A;  4A7W A;  1ZHV A;  3C1M A;  2JI5 A;  2J0W A;  4A7X A; 
#chains in the Genus database with same CATH topology
 2RD5 A;  3LDU A;  4KR9 A;  3TM4 A;  2JJX A;  2BNF A;  3L76 A;  3QUN A;  1ZVP A;  4NDR A;  4NDQ A;  2BRI A;  4NDO A;  3KZF A;  3AAW A;  2J4J A;  3B8G A;  3U6U A;  3V8V A;  3K0B A;  3ZZG A;  3ZZI A;  3LL9 A;  2E9Y A;  1Z9D A;  2OGX A;  3D41 A;  3K56 A;  2J0X A;  4Q1T A;  2WE4 A;  3ZZF A;  4F6T A;  2BTY A;  2J5T A;  3K4Y A;  3EK6 A;  3QVF A;  2WE5 A;  3L86 A;  2J5V A;  4OLC A;  2J4L A;  3QUR A;  2VA1 A;  3LDG A;  1E19 A;  4NDR B;  4NDQ B;  3AB2 A;  4NDO B;  2BND A;  2IJ9 A;  2V5H A;  3D2P A;  3D40 A;  4AB7 A;  2HMF A;  3NWY A;  4JZ7 A;  2WXB A;  2V4Y A;  2JJ4 A;  4KR6 A;  2OGX B;  4NDP B;  3S6H A;  1OHB A;  3QUO A;  4KZT A;  2AP9 A;  3WWM A;  4USJ A;  3LL5 A;  4F6T B;  3EK5 A;  3S6G A;  2W21 A;  1GSJ A;  3TM5 A;  2C5S A;  4JZ9 A;  3T7B A;  2BMU A;  3TMA A;  2A1F A;  3C20 A;  1B7B A;  4KR7 A;  2R98 A;  1OH9 A;  2BUF A;  1GS5 A;  2AKO A;  4AXS A;  2CDQ A;  3K52 A;  3D2M A;  3K4O A;  4JZ8 A;  3QVH A;  3TVI A;  4I49 A;  2R8V A;  2X2W A;  3TLJ A;  1YBD A;  2J4K A;  2BNE A;  2BRX A;  3C1N A;  3V97 A;  4NDP A;  3S6K A;  3LKK A;  1OHA A;  3ZZH A;  3AB4 A;  3WWN A;  2F06 A;  4A7W A;  1ZHV A;  3C1M A;  2JI5 A;  2J0W A;  4A7X A; 
#chains in the Genus database with same CATH homology
 2RD5 A;  3LDU A;  4KR9 A;  3TM4 A;  2JJX A;  2BNF A;  3L76 A;  3QUN A;  1ZVP A;  4NDR A;  4NDQ A;  2BRI A;  4NDO A;  3KZF A;  3AAW A;  2J4J A;  3B8G A;  3U6U A;  3V8V A;  3K0B A;  3ZZG A;  3ZZI A;  3LL9 A;  2E9Y A;  1Z9D A;  2OGX A;  3D41 A;  3K56 A;  2J0X A;  4Q1T A;  2WE4 A;  3ZZF A;  4F6T A;  2BTY A;  2J5T A;  3K4Y A;  3EK6 A;  3QVF A;  2WE5 A;  3L86 A;  2J5V A;  4OLC A;  2J4L A;  3QUR A;  2VA1 A;  3LDG A;  1E19 A;  4NDR B;  4NDQ B;  3AB2 A;  4NDO B;  2BND A;  2IJ9 A;  2V5H A;  3D2P A;  3D40 A;  4AB7 A;  2HMF A;  3NWY A;  4JZ7 A;  2WXB A;  2V4Y A;  2JJ4 A;  4KR6 A;  2OGX B;  4NDP B;  3S6H A;  1OHB A;  3QUO A;  4KZT A;  2AP9 A;  3WWM A;  4USJ A;  3LL5 A;  4F6T B;  3EK5 A;  3S6G A;  2W21 A;  1GSJ A;  3TM5 A;  2C5S A;  4JZ9 A;  3T7B A;  2BMU A;  3TMA A;  2A1F A;  3C20 A;  1B7B A;  4KR7 A;  2R98 A;  1OH9 A;  2BUF A;  1GS5 A;  2AKO A;  4AXS A;  2CDQ A;  3K52 A;  3D2M A;  3K4O A;  4JZ8 A;  3QVH A;  3TVI A;  4I49 A;  2R8V A;  2X2W A;  3TLJ A;  1YBD A;  2J4K A;  2BNE A;  2BRX A;  3C1N A;  3V97 A;  4NDP A;  3S6K A;  3LKK A;  1OHA A;  3ZZH A;  3AB4 A;  3WWN A;  2F06 A;  4A7W A;  1ZHV A;  3C1M A;  2JI5 A;  2J0W A;  4A7X A; 
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