3AE6D

Crystal structure of porcine heart mitochondrial complex ii bound with n-(3-isopropoxy-phenyl)-phthalamicacid
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
102
structure length
102
Chain Sequence
SSKAASLHWTGERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGIGQVVTDYVRGDALQKAAKAGLLALSAFTFAGLCYFNYHDVGICKAVAMLWKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of porcine heart mitochondrial complex II bound with N-(3-Isopropoxy-phenyl)-phthalamicacid
rcsb
molecule tags Oxidoreductase/oxidoreductase inhibitor
molecule keywords Succinate dehydrogenase [ubiquinone] flavoprotein subunit, m
total genus 40
structure length 102
sequence length 102
ec nomenclature
pdb deposition date 2010-02-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1300.10 Mainly Alpha Up-down Bundle 3 helical TM bundles of succinate and fumarate reductases Fumarate reductase/succinate dehydrogenase, transmembrane subunit 3ae6D00
3CIRC 4KX6D 3SFDC 3AEBD 4YSYC 4YT0D 2WP9C 2H89D 3AEGC 3AE5D 3ABVD 3AEFD 3VR8C 1NENC 4YTMC 4YSZD 3AEAD 1ZP0C 4YTNC 3AE6C 3AEED 3AEDD 2FBWD 3AE3D 2WDVC 3P4PD 3AE9C 3P4SC 3AE2D 2WU2C 5C3JC 2H88C 1KFYC 1L0VD 3VRBC 4YSXC 3VR9C 3AE4C 2WDQC 1YQ4C 3AECD 3AE8D 3AEBC 4YT0C 3P4QC 1KF6D 3AE1D 3SFED 3AE7D 3AE5C 3P4RD 2WS3C 2ACZD 3ABVC 4YSZC 2WQYD 4YSYD 3AEEC 3AEDC 2B76D 1NEKD 3P4PC 3AE2C 1YQ3C 2WU5C 2WDRC 4YTPD 1ZOYC 4KX6C 1NEND 1ZP0D 3AECC 2BS2C 3AE8C 5C2TD 2H89C 3AE9D 3P4SD 2WU2D 4YXDD 1KFYD 3P4RC 3AEFC 3VRBD 3VRAD 3CIRD 3SFDD 3AEAC 2WDQD 2ACZC 1YQ4D 1E7PC 2WP9D 2WQYC 2FBWC 3AE3C 3AEGD 3P4QD 1L0VC 2B76C 1NEKC 3VR8D 4YTPC 2WS3D 4YTMD 4YTND 3AE6D 1QLBC 2WDVD 1KF6C 5C2TC 3AE1C 2BS4C 5C3JD 2H88D 3AE7C 3SFEC 3VR9D 4YSXD 3AE4D 1YQ3D 2WU5D 4YXDC 2BS3C 2WDRD 1ZOYD 3VRAC
chains in the Genus database with same CATH superfamily
3CIRC 4KX6D 3SFDC 3AEBD 4LDTA 4YSYC 4YT0D 2WP9C 2ZFYA 2H89D 3AEGC 3AE5D 3ABVD 3AEFD 3VR8C 1NENC 4YTMC 4YSZD 3AEAD 4DHJA 1ZP0C 4YTNC 3AE6C 3AEED 3AEDD 2FBWD 3AE3D 2WDVC 3P4PD 3AE9C 3P4SC 3AE2D 2WU2C 5C3JC 2H88C 1KFYC 1L0VD 3VRBC 4YSXC 3VR9C 3AE4C 2WDQC 1YQ4C 3AECD 3AE8D 4DDIA 3AEBC 4YT0C 3P4QC 1KF6D 3AE1D 3SFED 3AE7D 3AE5C 3P4RD 2WS3C 2ACZD 3ABVC 4YSZC 2WQYD 4YSYD 3AEEC 3AEDC 4DHZA 2B76D 1NEKD 3P4PC 3AE2C 1YQ3C 2WU5C 2WDRC 4YTPD 1ZOYC 4KX6C 4FJVA 1NEND 4DHIB 1ZP0D 3AECC 2BS2C 3AE8C 5C2TD 2H89C 3AE9D 3P4SD 2WU2D 4YXDD 4I6LA 1KFYD 3P4RC 3AEFC 3VRBD 3VRAD 3CIRD 3SFDD 3AEAC 2WDQD 2ACZC 1YQ4D 3VONA 1E7PC 4DDGA 2WP9D 2WQYC 2FBWC 3AE3C 3AEGD 3P4QD 1L0VC 2B76C 1NEKC 3VR8D 4YTPC 2WS3D 4YTMD 4YTND 3AE6D 1QLBC 2WDVD 1KF6C 5C2TC 3AE1C 2BS4C 5C3JD 1TFFA 2H88D 3AE7C 3SFEC 3VR9D 4YSXD 3AE4D 1YQ3D 2WU5D 4YXDC 2BS3C 2WDRD 1ZOYD 3VRAC
chains in the Genus database with same CATH topology
3CIRC 4KX6D 3SFDC 3AEBD 4YSYC 4YT0D 2WP9C 2H89D 3AEGC 3AE5D 3ABVD 3AEFD 3VR8C 1NENC 4YTMC 4YSZD 3AEAD 1ZP0C 4YTNC 3AE6C 3AEED 3AEDD 2FBWD 3AE3D 2WDVC 3P4PD 3AE9C 3P4SC 3AE2D 2WU2C 5C3JC 2H88C 1KFYC 1L0VD 3VRBC 4YSXC 3VR9C 3AE4C 2WDQC 1YQ4C 3AECD 3AE8D 3AEBC 4YT0C 3P4QC 1KF6D 3AE1D 3SFED 3AE7D 3AE5C 3P4RD 2WS3C 2ACZD 3ABVC 4YSZC 2WQYD 4YSYD 3AEEC 3AEDC 2B76D 1NEKD 3P4PC 3AE2C 1YQ3C 2WU5C 2WDRC 4YTPD 1ZOYC 4KX6C 1NEND 1ZP0D 3AECC 2BS2C 3AE8C 5C2TD 2H89C 3AE9D 3P4SD 2WU2D 4YXDD 1KFYD 3P4RC 3AEFC 3VRBD 3VRAD 3CIRD 3SFDD 3AEAC 2WDQD 2ACZC 1YQ4D 1E7PC 2WP9D 2WQYC 2FBWC 3AE3C 3AEGD 3P4QD 1L0VC 2B76C 1NEKC 3VR8D 4YTPC 2WS3D 4YTMD 4YTND 3AE6D 1QLBC 2WDVD 1KF6C 5C2TC 3AE1C 2BS4C 5C3JD 2H88D 3AE7C 3SFEC 3VR9D 4YSXD 3AE4D 1YQ3D 2WU5D 4YXDC 2BS3C 2WDRD 1ZOYD 3VRAC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CIR C;  4KX6 D;  3SFD C;  3AEB D;  4YSY C;  4YT0 D;  2WP9 C;  2H89 D;  3AEG C;  3AE5 D;  3ABV D;  3AEF D;  3VR8 C;  1NEN C;  4YTM C;  4YSZ D;  3AEA D;  1ZP0 C;  4YTN C;  3AE6 C;  3AEE D;  3AED D;  2FBW D;  3AE3 D;  2WDV C;  3P4P D;  3AE9 C;  3P4S C;  3AE2 D;  2WU2 C;  5C3J C;  2H88 C;  1KFY C;  1L0V D;  3VRB C;  4YSX C;  3VR9 C;  3AE4 C;  2WDQ C;  1YQ4 C;  3AEC D;  3AE8 D;  3AEB C;  4YT0 C;  3P4Q C;  1KF6 D;  3AE1 D;  3SFE D;  3AE7 D;  3AE5 C;  3P4R D;  2WS3 C;  2ACZ D;  3ABV C;  4YSZ C;  2WQY D;  4YSY D;  3AEE C;  3AED C;  2B76 D;  1NEK D;  3P4P C;  3AE2 C;  1YQ3 C;  2WU5 C;  2WDR C;  4YTP D;  1ZOY C;  4KX6 C;  1NEN D;  1ZP0 D;  3AEC C;  2BS2 C;  3AE8 C;  5C2T D;  2H89 C;  3AE9 D;  3P4S D;  2WU2 D;  4YXD D;  1KFY D;  3P4R C;  3AEF C;  3VRB D;  3VRA D;  3CIR D;  3SFD D;  3AEA C;  2WDQ D;  2ACZ C;  1YQ4 D;  1E7P C;  2WP9 D;  2WQY C;  2FBW C;  3AE3 C;  3AEG D;  3P4Q D;  1L0V C;  2B76 C;  1NEK C;  3VR8 D;  4YTP C;  2WS3 D;  4YTM D;  4YTN D;  3AE6 D;  1QLB C;  2WDV D;  1KF6 C;  5C2T C;  3AE1 C;  2BS4 C;  5C3J D;  2H88 D;  3AE7 C;  3SFE C;  3VR9 D;  4YSX D;  3AE4 D;  1YQ3 D;  2WU5 D;  4YXD C;  2BS3 C;  2WDR D;  1ZOY D;  3VRA C; 
#chains in the Genus database with same CATH topology
 3CIR C;  4KX6 D;  3SFD C;  3AEB D;  4LDT A;  4YSY C;  4YT0 D;  2WP9 C;  2ZFY A;  2H89 D;  3AEG C;  3AE5 D;  3ABV D;  3AEF D;  3VR8 C;  1NEN C;  4YTM C;  4YSZ D;  3AEA D;  4DHJ A;  1ZP0 C;  4YTN C;  3AE6 C;  3AEE D;  3AED D;  2FBW D;  3AE3 D;  2WDV C;  3P4P D;  3AE9 C;  3P4S C;  3AE2 D;  2WU2 C;  5C3J C;  2H88 C;  1KFY C;  1L0V D;  3VRB C;  4YSX C;  3VR9 C;  3AE4 C;  2WDQ C;  1YQ4 C;  3AEC D;  3AE8 D;  4DDI A;  3AEB C;  4YT0 C;  3P4Q C;  1KF6 D;  3AE1 D;  3SFE D;  3AE7 D;  3AE5 C;  3P4R D;  2WS3 C;  2ACZ D;  3ABV C;  4YSZ C;  2WQY D;  4YSY D;  3AEE C;  3AED C;  4DHZ A;  2B76 D;  1NEK D;  3P4P C;  3AE2 C;  1YQ3 C;  2WU5 C;  2WDR C;  4YTP D;  1ZOY C;  4KX6 C;  4FJV A;  1NEN D;  4DHI B;  1ZP0 D;  3AEC C;  2BS2 C;  3AE8 C;  5C2T D;  2H89 C;  3AE9 D;  3P4S D;  2WU2 D;  4YXD D;  4I6L A;  1KFY D;  3P4R C;  3AEF C;  3VRB D;  3VRA D;  3CIR D;  3SFD D;  3AEA C;  2WDQ D;  2ACZ C;  1YQ4 D;  3VON A;  1E7P C;  4DDG A;  2WP9 D;  2WQY C;  2FBW C;  3AE3 C;  3AEG D;  3P4Q D;  1L0V C;  2B76 C;  1NEK C;  3VR8 D;  4YTP C;  2WS3 D;  4YTM D;  4YTN D;  3AE6 D;  1QLB C;  2WDV D;  1KF6 C;  5C2T C;  3AE1 C;  2BS4 C;  5C3J D;  1TFF A;  2H88 D;  3AE7 C;  3SFE C;  3VR9 D;  4YSX D;  3AE4 D;  1YQ3 D;  2WU5 D;  4YXD C;  2BS3 C;  2WDR D;  1ZOY D;  3VRA C; 
#chains in the Genus database with same CATH homology
 3CIR C;  4KX6 D;  3SFD C;  3AEB D;  4YSY C;  4YT0 D;  2WP9 C;  2H89 D;  3AEG C;  3AE5 D;  3ABV D;  3AEF D;  3VR8 C;  1NEN C;  4YTM C;  4YSZ D;  3AEA D;  1ZP0 C;  4YTN C;  3AE6 C;  3AEE D;  3AED D;  2FBW D;  3AE3 D;  2WDV C;  3P4P D;  3AE9 C;  3P4S C;  3AE2 D;  2WU2 C;  5C3J C;  2H88 C;  1KFY C;  1L0V D;  3VRB C;  4YSX C;  3VR9 C;  3AE4 C;  2WDQ C;  1YQ4 C;  3AEC D;  3AE8 D;  3AEB C;  4YT0 C;  3P4Q C;  1KF6 D;  3AE1 D;  3SFE D;  3AE7 D;  3AE5 C;  3P4R D;  2WS3 C;  2ACZ D;  3ABV C;  4YSZ C;  2WQY D;  4YSY D;  3AEE C;  3AED C;  2B76 D;  1NEK D;  3P4P C;  3AE2 C;  1YQ3 C;  2WU5 C;  2WDR C;  4YTP D;  1ZOY C;  4KX6 C;  1NEN D;  1ZP0 D;  3AEC C;  2BS2 C;  3AE8 C;  5C2T D;  2H89 C;  3AE9 D;  3P4S D;  2WU2 D;  4YXD D;  1KFY D;  3P4R C;  3AEF C;  3VRB D;  3VRA D;  3CIR D;  3SFD D;  3AEA C;  2WDQ D;  2ACZ C;  1YQ4 D;  1E7P C;  2WP9 D;  2WQY C;  2FBW C;  3AE3 C;  3AEG D;  3P4Q D;  1L0V C;  2B76 C;  1NEK C;  3VR8 D;  4YTP C;  2WS3 D;  4YTM D;  4YTN D;  3AE6 D;  1QLB C;  2WDV D;  1KF6 C;  5C2T C;  3AE1 C;  2BS4 C;  5C3J D;  2H88 D;  3AE7 C;  3SFE C;  3VR9 D;  4YSX D;  3AE4 D;  1YQ3 D;  2WU5 D;  4YXD C;  2BS3 C;  2WDR D;  1ZOY D;  3VRA C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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