3AHOA

Pz peptidase a with inhibitor 2
Total Genus 248
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
248
sequence length
564
structure length
564
Chain Sequence
MKFSEFRYERPNIEKLKASFQQALQSFQKASNAEEQNEAMKEINQLRNDFSTMAQICYIRHTIDTNDEFYKQEQDFFDEVEPIVKGLVNDYYRALVSSPFRSQLEGKWGKQLFALAEAELKTYSPDIVEDLQLENKLTSEYTKLVASAKIFFEGEERTLAQLQPFVESPDRDMRKRASEARFTFFQEHEEKFDEIYDQLVKVRTAIAQKLGFKNFVELGYARLGRTDYNAEMVAKFRKQVEKHIVPIAVKLRERQRERIGVEKLKYYDEAFVFPTGNPMPKGDANWIIENGKKMYEELSPETGEFFRYMIEHELMDLVAKKGKASGGYCTYIENYKAPFIFSNFTGTSGDIDVLTHEAGHAFQVYESRHYEIPEYNWPTLEACEIHSMSMEFFTWPWMKLFFKEDAEKYQFYHLSDALLFLPYGVAVDEFQHFVYENPNATPAERKQAWRAIERKYMPTKDYDGNDYLERGGFWQRQSHIYTTAFYYIDYTLAQICAFQFWKRSRENYKEAWNDYLTLCRQGGSKPFTELVRVANLISPFEDGCVQSVVGGIEGWLNSVDDQSL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Oligopeptidase
publication title The exquisite structure and reaction mechanism of bacterial Pz-peptidase A toward collagenous peptides: X-ray crystallographic structure analysis of PZ-peptidase a reveals differences from mammalian thimet oligopeptidase.
pubmed doi rcsb
total genus 248
structure length 564
sequence length 564
chains with identical sequence B
ec nomenclature
pdb deposition date 2010-04-25
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1370.30 Mainly Alpha Orthogonal Bundle Neurolysin; domain 3 Neurolysin; domain 3 3ahoA00
3AHOA 3AHNA 5E3XA 3HOAA 3DWCA 1KA2A 2H1JA 1K9XA 3AHMA 3SKSA 3HQ2A 2H1NA 1KA4A
chains in the Genus database with same CATH superfamily
3AHNA 3HOAA 4PUTA 2O36A 5L44A 1KA2A 3HQ2A 4KA7A 1S4BP 1Y791 2O3EA 3SKSA 2H1NA 3AHOA 3AHMA 2H1JA 5L43A 3CE2A 2QR4A 4FXYP 4KA8A 5E3XA 3DWCA 1I1IP 1K9XA 1KA4A
chains in the Genus database with same CATH topology
3AHNA 3HOAA 4PUTA 5L44A 1KA2A 3HQ2A 4KA7A 1Y791 3SKSA 2H1NA 3AHOA 3AHMA 2H1JA 5L43A 3CE2A 2QR4A 4KA8A 5E3XA 3DWCA 1K9XA 1KA4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3AHO A;  3AHN A;  5E3X A;  3HOA A;  3DWC A;  1KA2 A;  2H1J A;  1K9X A;  3AHM A;  3SKS A;  3HQ2 A;  2H1N A;  1KA4 A; 
#chains in the Genus database with same CATH topology
 3AHN A;  3HOA A;  4PUT A;  2O36 A;  5L44 A;  1KA2 A;  3HQ2 A;  4KA7 A;  1S4B P;  1Y79 1;  2O3E A;  3SKS A;  2H1N A;  3AHO A;  3AHM A;  2H1J A;  5L43 A;  3CE2 A;  2QR4 A;  4FXY P;  4KA8 A;  5E3X A;  3DWC A;  1I1I P;  1K9X A;  1KA4 A; 
#chains in the Genus database with same CATH homology
 3AHN A;  3HOA A;  4PUT A;  5L44 A;  1KA2 A;  3HQ2 A;  4KA7 A;  1Y79 1;  3SKS A;  2H1N A;  3AHO A;  3AHM A;  2H1J A;  5L43 A;  3CE2 A;  2QR4 A;  4KA8 A;  5E3X A;  3DWC A;  1K9X A;  1KA4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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