3AWVB

Crystal structure of streptomyces tyrosinase in a complex with caddie soaked in a cu(ii)-containing solution for 80 hr: occupancy of cua is low
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
84
structure length
78
Chain Sequence
AAPESFDEVYKGRRIQGRPAHEHGGGYEVFVDGVQLHVMRNADGSWISVVSHYDPVPTPRAAARAAVDELQGAPLLPF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/metal transport
molecule keywords Tyrosinase
publication title A molecular mechanism for copper transportation to tyrosinase that is assisted by a metallochaperone, caddie protein
pubmed doi rcsb
source organism Streptomyces castaneoglobisporus
total genus 17
structure length 78
sequence length 84
ec nomenclature
pdb deposition date 2011-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF06236 MelC1 Tyrosinase co-factor MelC1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1880.10 Alpha Beta 2-Layer Sandwich protein ne1242 fold protein ne1242 domain like 3awvB01
2AHKB 2ZWEB 3AX0B 2AHLB 2ZWDB 2ZWGB 3AWVB 3AWWB 3AWYB 1WX5B 1WXCB 3AWTB 2ZMYB 2ZWFB 1WX4B 3AWZB 2ZMXB 2ZMZB 3AWXB 1WX2B 3AWSB 2JV8A 3AWUB
chains in the Genus database with same CATH superfamily
3GCFA 2AHKB 4NBGA 3VMHA 2ZWEB 3VMIA 1Z03A 2AHLB 3AX0B 4NBCA 4NBHA 2DE7A 2ZWDB 4NBAA 4NBDA 4NB8A 2ZWGB 3AWVB 2DE5A 3AWWB 1Z02A 3AWYB 1Z01A 1WX5B 1WXCB 2DE6A 3AWTB 4NB9A 3VMGA 2ZMYB 2ZWFB 1WX4B 3AWZB 4NBFA 2ZMXB 2ZMZB 3AWXB 4NBEA 3GKQA 4NBBA 1WX2B 3AWSB 2JV8A 3AWUB 1WW9A
chains in the Genus database with same CATH topology
2AHKB 2ZWEB 3AX0B 2AHLB 2ZWDB 2ZWGB 3AWVB 3AWWB 3AWYB 1WX5B 1WXCB 3AWTB 2ZMYB 2ZWFB 1WX4B 3AWZB 2ZMXB 2ZMZB 3AWXB 1WX2B 3AWSB 2JV8A 3AWUB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AHK B;  2ZWE B;  3AX0 B;  2AHL B;  2ZWD B;  2ZWG B;  3AWV B;  3AWW B;  3AWY B;  1WX5 B;  1WXC B;  3AWT B;  2ZMY B;  2ZWF B;  1WX4 B;  3AWZ B;  2ZMX B;  2ZMZ B;  3AWX B;  1WX2 B;  3AWS B;  2JV8 A;  3AWU B; 
#chains in the Genus database with same CATH topology
 3GCF A;  2AHK B;  4NBG A;  3VMH A;  2ZWE B;  3VMI A;  1Z03 A;  2AHL B;  3AX0 B;  4NBC A;  4NBH A;  2DE7 A;  2ZWD B;  4NBA A;  4NBD A;  4NB8 A;  2ZWG B;  3AWV B;  2DE5 A;  3AWW B;  1Z02 A;  3AWY B;  1Z01 A;  1WX5 B;  1WXC B;  2DE6 A;  3AWT B;  4NB9 A;  3VMG A;  2ZMY B;  2ZWF B;  1WX4 B;  3AWZ B;  4NBF A;  2ZMX B;  2ZMZ B;  3AWX B;  4NBE A;  3GKQ A;  4NBB A;  1WX2 B;  3AWS B;  2JV8 A;  3AWU B;  1WW9 A; 
#chains in the Genus database with same CATH homology
 2AHK B;  2ZWE B;  3AX0 B;  2AHL B;  2ZWD B;  2ZWG B;  3AWV B;  3AWW B;  3AWY B;  1WX5 B;  1WXC B;  3AWT B;  2ZMY B;  2ZWF B;  1WX4 B;  3AWZ B;  2ZMX B;  2ZMZ B;  3AWX B;  1WX2 B;  3AWS B;  2JV8 A;  3AWU B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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