3BRXA

Crystal structure of calcium-bound cotton annexin gh1
Total Genus 126
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
317
structure length
317
Chain Sequence
HHATLTVPTTVPSVSEDCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYAETYGEDLLKALDKELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYHARYKKSLEEDVAHHTTGDFHKLLLPLVSSYRYEGEEVNMTLAKTEAKLLHEKISNKAYSDDDVIRVLATRSKAQINATLNHYKNEYGNDINKDLKADPKDEFLALLRSTVKCLVYPEKYFEKVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQRRNSVPLTRAIVKDTHGDYEKLLLVLAGHVEN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Annexin
publication title The crystal structure of calcium-bound annexin Gh1 from Gossypium hirsutum and its implications for membrane binding mechanisms of plant annexins.
pubmed doi rcsb
source organism Gossypium hirsutum
molecule tags Membrane protein
total genus 126
structure length 317
sequence length 317
ec nomenclature
pdb deposition date 2007-12-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00191 Annexin Annexin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 3brxA04
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 3brxA02
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 3brxA03
1.10.220.10 Mainly Alpha Orthogonal Bundle Annexin V; domain 1 Annexin 3brxA01
1HAKA 2H0LA 1A8BA 1MCXA 1ANWA 1AVCA 2II2A 4EVFA 1ANXA 1BCZA 1DK5A 3BRXA 1SAVA 1HVEA 1BCWA 1BC1A 2ZHIA 2IICA 1W3WA 2HYVA 1ALAA 2XO2A 1DM5A 2XO3A 2Q4CA 1W45A 1YCNA 1W7BA 4MDVA 1AEIA 1I4AA 2ZHJA 1HVFA 2H0MA 2H0KA 2RANA 2IE6A 1AIIA 1HVDA 1N00A 1M9IA 2ZOCA 1BC0A 1ANNA 1HVGA 4HREA 1N44A 1N41A 1A8AA 1YJ0A 1AVRA 4EVHA 1AVHA 1XJLA 2IE7A 1AOWA 1AXNA 2HYWA 1BCYA 1BO9A 4X9PA 1BC3A 2HYUA 1N42A 1G5NA 1YIIA 4MDUA 1HM6A
chains in the Genus database with same CATH superfamily
1R4AE 1MCXA 3L8NA 3USWA 3BRXA 1SAVA 4KN7X 3TW5A 1W3WA 4JXHA 4JMOA 2Q4CA 1YCNA 4Q2SA 4FHRB 1HVFA 3ABSA 2R09A 1KU1A 1HVDA 1N00A 2ZOCA 2HSNA 1ANNA 1C1KA 1N44A 1N41A 4JK1X 1AXNA 1BCYA 2QEZA 3ANYA 1BC3A 1RE0B 2RANA 1YIIA 1HM6A 2XO3A 3SWVA 2H0LA 1XT0B 1ANXA 1BCZA 3USYA 2ZHIA 2VXGA 2HYVA 1R8QE 4A4PA 4MDVA 2K6XA 1LKVX 2H0MA 3AJCA 1AVRA 1AVHA 1XJLA 2IE7A 1YGMA 3ABQA 1HAKA 3HJLA 1ANWA 3AO0A 3LTLA 1AVCA 2II2A 4EVFA 1DK5A 4D7QA 3ABOA 1HVEA 4C7PA 1S9DE 2IICA 1ALAA 2XO2A 1W45A 2ZHJA 4L5MA 4Z21A 2H0KA 2IE6A 1M9IA 4C0AA 1BC9A 1HVGA 4JWLA 4D7RA 4KN4X 1AOWA 2HYWA 2HYUA 3SOHB 1A8BA 4KMUX 4FQ0C 1BCWA 1BC1A 1DM5A 3ABRA 1W7BA 1AEIA 1I4AA 1XSZA 1PBVA 1AIIA 1BC0A 1QC7A 1UPTB 4JMIA 4HREA 1R8ME 2OY9A 1A8AA 1YJ0A 4EVHA 1Q8DA 1BO9A 4OIYA 1R8SE 4X9PA 2R0DA 1N42A 1G5NA 4MDUA
chains in the Genus database with same CATH topology
1HAKA 2H0LA 1A8BA 1MCXA 1ANWA 1AVCA 2II2A 4EVFA 1ANXA 1BCZA 1DK5A 3BRXA 1SAVA 1HVEA 1BCWA 1BC1A 2ZHIA 2IICA 1W3WA 2HYVA 1ALAA 2XO2A 1DM5A 2XO3A 2Q4CA 1W45A 1YCNA 1W7BA 4MDVA 1AEIA 1I4AA 2ZHJA 1HVFA 2H0MA 2H0KA 2RANA 2IE6A 1AIIA 1HVDA 1N00A 1M9IA 2ZOCA 1BC0A 1ANNA 1HVGA 4HREA 1N44A 1N41A 1A8AA 1YJ0A 1AVRA 4EVHA 1AVHA 1XJLA 2IE7A 1AOWA 1AXNA 2HYWA 1BCYA 1BO9A 4X9PA 1BC3A 2HYUA 1N42A 1G5NA 1YIIA 4MDUA 1HM6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HAK A;  2H0L A;  1A8B A;  1MCX A;  1ANW A;  1AVC A;  2II2 A;  4EVF A;  1ANX A;  1BCZ A;  1DK5 A;  3BRX A;  1SAV A;  1HVE A;  1BCW A;  1BC1 A;  2ZHI A;  2IIC A;  1W3W A;  2HYV A;  1ALA A;  2XO2 A;  1DM5 A;  2XO3 A;  2Q4C A;  1W45 A;  1YCN A;  1W7B A;  4MDV A;  1AEI A;  1I4A A;  2ZHJ A;  1HVF A;  2H0M A;  2H0K A;  2RAN A;  2IE6 A;  1AII A;  1HVD A;  1N00 A;  1M9I A;  2ZOC A;  1BC0 A;  1ANN A;  1HVG A;  4HRE A;  1N44 A;  1N41 A;  1A8A A;  1YJ0 A;  1AVR A;  4EVH A;  1AVH A;  1XJL A;  2IE7 A;  1AOW A;  1AXN A;  2HYW A;  1BCY A;  1BO9 A;  4X9P A;  1BC3 A;  2HYU A;  1N42 A;  1G5N A;  1YII A;  4MDU A;  1HM6 A; 
#chains in the Genus database with same CATH topology
 1R4A E;  1MCX A;  3L8N A;  3USW A;  3BRX A;  1SAV A;  4KN7 X;  3TW5 A;  1W3W A;  4JXH A;  4JMO A;  2Q4C A;  1YCN A;  4Q2S A;  4FHR B;  1HVF A;  3ABS A;  2R09 A;  1KU1 A;  1HVD A;  1N00 A;  2ZOC A;  2HSN A;  1ANN A;  1C1K A;  1N44 A;  1N41 A;  4JK1 X;  1AXN A;  1BCY A;  2QEZ A;  3ANY A;  1BC3 A;  1RE0 B;  2RAN A;  1YII A;  1HM6 A;  2XO3 A;  3SWV A;  2H0L A;  1XT0 B;  1ANX A;  1BCZ A;  3USY A;  2ZHI A;  2VXG A;  2HYV A;  1R8Q E;  4A4P A;  4MDV A;  2K6X A;  1LKV X;  2H0M A;  3AJC A;  1AVR A;  1AVH A;  1XJL A;  2IE7 A;  1YGM A;  3ABQ A;  1HAK A;  3HJL A;  1ANW A;  3AO0 A;  3LTL A;  1AVC A;  2II2 A;  4EVF A;  1DK5 A;  4D7Q A;  3ABO A;  1HVE A;  4C7P A;  1S9D E;  2IIC A;  1ALA A;  2XO2 A;  1W45 A;  2ZHJ A;  4L5M A;  4Z21 A;  2H0K A;  2IE6 A;  1M9I A;  4C0A A;  1BC9 A;  1HVG A;  4JWL A;  4D7R A;  4KN4 X;  1AOW A;  2HYW A;  2HYU A;  3SOH B;  1A8B A;  4KMU X;  4FQ0 C;  1BCW A;  1BC1 A;  1DM5 A;  3ABR A;  1W7B A;  1AEI A;  1I4A A;  1XSZ A;  1PBV A;  1AII A;  1BC0 A;  1QC7 A;  1UPT B;  4JMI A;  4HRE A;  1R8M E;  2OY9 A;  1A8A A;  1YJ0 A;  4EVH A;  1Q8D A;  1BO9 A;  4OIY A;  1R8S E;  4X9P A;  2R0D A;  1N42 A;  1G5N A;  4MDU A; 
#chains in the Genus database with same CATH homology
 1HAK A;  2H0L A;  1A8B A;  1MCX A;  1ANW A;  1AVC A;  2II2 A;  4EVF A;  1ANX A;  1BCZ A;  1DK5 A;  3BRX A;  1SAV A;  1HVE A;  1BCW A;  1BC1 A;  2ZHI A;  2IIC A;  1W3W A;  2HYV A;  1ALA A;  2XO2 A;  1DM5 A;  2XO3 A;  2Q4C A;  1W45 A;  1YCN A;  1W7B A;  4MDV A;  1AEI A;  1I4A A;  2ZHJ A;  1HVF A;  2H0M A;  2H0K A;  2RAN A;  2IE6 A;  1AII A;  1HVD A;  1N00 A;  1M9I A;  2ZOC A;  1BC0 A;  1ANN A;  1HVG A;  4HRE A;  1N44 A;  1N41 A;  1A8A A;  1YJ0 A;  1AVR A;  4EVH A;  1AVH A;  1XJL A;  2IE7 A;  1AOW A;  1AXN A;  2HYW A;  1BCY A;  1BO9 A;  4X9P A;  1BC3 A;  2HYU A;  1N42 A;  1G5N A;  1YII A;  4MDU A;  1HM6 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...