3CCUR

Structure of anisomycin resistant 50s ribosomal subunit: 23s rrna mutation g2482c
Total Genus 37
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
150
structure length
150
Chain Sequence
GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Ribosome
molecule keywords 50S ribosomal protein L2P
publication title Mutations outside the anisomycin-binding site can make ribosomes drug-resistant.
pubmed doi rcsb
total genus 37
structure length 150
sequence length 150
ec nomenclature
pdb deposition date 2008-02-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
R PF00237 Ribosomal_L22 Ribosomal protein L22p/L17e
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.470.10 Alpha Beta Alpha-Beta Complex Ribosomal Protein L22; Chain A Ribosomal protein L22/L17 3ccuR00
1Q7YS 1W2BQ 1M90S 3CMAR 1Q81S 3J7ZS 5HL7P 3CCMR 3G71R 3CCER 5GADT 4IO9P 5GAHT 4WFNP 1M1KS 1KD1S 1KQSQ 1VQMR 4WCEP 3G6ER 3CPWQ 2QA4R 3I55R 3DLLP 3CMER 3I56R 5JVGP 1YJWR 2OTLR 1BXEA 5H1SU 4WF9P 4WFAP 3CXCQ 5GAET 4UY8S 3G4SR 1K9MS 4IOAP 3PIOP 4IOCP 5JVHP 3CC7R 1YHQR 1VQ6R 1K73S 3CD6R 3CC4R 1N8RS 2ZJQP 5MLCU 1VQ9R 1QVFQ 1K8AS 1NJIS 3CCUR 1VQPR 3CCVR 1VQ7R 3OW2Q 1Q86S 1S72R 2ZJPP 1VQ8R 1KC8S 3CCLR 1VQNR 1VQ4R 3CF5P 1YI2R 1QVGQ 3CC2R 1VQKR 5DM7P 5GAGT 3PIPP 3CCSR 1VQLR 5DM6P 1I4JA 1Q82S 2QEXR 4WFBP 4V19W 3CCRR 3CCJR 1YJNR 1YIJR 1VQ5R 1VQOR 2OTJR 2ZJRP 3CCQR 1YITR 1JJ2Q 3J7YT 4U67P 1YJ9R
chains in the Genus database with same CATH superfamily
1Q7YS 3NE1A 1W2BQ 1M90S 1FTHA 3CMAR 2WATA 1Q81S 3J7ZS 5HL7P 3CCMR 5CXDA 3HYKA 3G71R 3CCER 3H7QA 5GADT 4DXEA 2JCAA 4IO9P 5GAHT 2D0OA 4WFNP 1M1KS 3GWMA 1KD1S 1KQSQ 2D0PA 1VQMR 4HC6A 1FTEA 4WCEP 3G6ER 1FTFA 3CPWQ 3HQJA 3I55R 2QA4R 3DLLP 2QG8A 3I56R 3CMER 5JVGP 1YJWR 1QR0A 3NE3B 2OTLR 1BXEA 2C43A 5H1SU 4WF9P 4WFAP 3CXCQ 5GAET 4UY8S 3G4SR 1K9MS 2WASA 4IOAP 3PIOP 3NE9A 4IOCP 5JVHP 3CC7R 1YHQR 1VQ6R 1K73S 3CD6R 3CC4R 5CMOA 1N8RS 3NFDA 1F7TA 2ZJQP 4JM7A 5MLCU 1VQ9R 1QVFQ 1F80A 1K8AS 1NJIS 3CCUR 1VQPR 2WDOA 3CCVR 1VQ7R 4MRTA 3OW2Q 1Q86S 1S72R 1NBWA 2ZJPP 2BYDA 1VQ8R 1KC8S 3CCLR 1VQNR 1VQ4R 3QMNA 3CF5P 1YI2R 2WASB 1QVGQ 3CC2R 2WDYA 1VQKR 5DM7P 5GAGT 2WDSA 3PIPP 3CCSR 1VQLR 2JBZA 2CG5A 5DM6P 1I4JA 1Q82S 2QEXR 4WFBP 2BDDA 4V19W 3CCRR 3CCJR 1YJNR 1YIJR 1F7LA 1VQ5R 1VQOR 2OTJR 2ZJRP 3CCQR 1YITR 1JJ2Q 3J7YT 4U67P 1YJ9R
chains in the Genus database with same CATH topology
1Q7YS 1W2BQ 1M90S 3CMAR 1Q81S 3J7ZS 5HL7P 3CCMR 3G71R 3CCER 5GADT 4IO9P 5GAHT 4WFNP 1M1KS 1KD1S 1KQSQ 1VQMR 4WCEP 3G6ER 3CPWQ 2QA4R 3I55R 3DLLP 3CMER 3I56R 5JVGP 1YJWR 2OTLR 1BXEA 5H1SU 4WF9P 4WFAP 3CXCQ 5GAET 4UY8S 3G4SR 1K9MS 4IOAP 3PIOP 4IOCP 5JVHP 3CC7R 1YHQR 1VQ6R 1K73S 3CD6R 3CC4R 1N8RS 2ZJQP 5MLCU 1VQ9R 1QVFQ 1K8AS 1NJIS 3CCUR 1VQPR 3CCVR 1VQ7R 3OW2Q 1Q86S 1S72R 2ZJPP 1VQ8R 1KC8S 3CCLR 1VQNR 1VQ4R 3CF5P 1YI2R 1QVGQ 3CC2R 1VQKR 5DM7P 5GAGT 3PIPP 3CCSR 1VQLR 5DM6P 1I4JA 1Q82S 2QEXR 4WFBP 4V19W 3CCRR 3CCJR 1YJNR 1YIJR 1VQ5R 1VQOR 2OTJR 2ZJRP 3CCQR 1YITR 1JJ2Q 3J7YT 4U67P 1YJ9R
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Q7Y S;  1W2B Q;  1M90 S;  3CMA R;  1Q81 S;  3J7Z S;  5HL7 P;  3CCM R;  3G71 R;  3CCE R;  5GAD T;  4IO9 P;  5GAH T;  4WFN P;  1M1K S;  1KD1 S;  1KQS Q;  1VQM R;  4WCE P;  3G6E R;  3CPW Q;  2QA4 R;  3I55 R;  3DLL P;  3CME R;  3I56 R;  5JVG P;  1YJW R;  2OTL R;  1BXE A;  5H1S U;  4WF9 P;  4WFA P;  3CXC Q;  5GAE T;  4UY8 S;  3G4S R;  1K9M S;  4IOA P;  3PIO P;  4IOC P;  5JVH P;  3CC7 R;  1YHQ R;  1VQ6 R;  1K73 S;  3CD6 R;  3CC4 R;  1N8R S;  2ZJQ P;  5MLC U;  1VQ9 R;  1QVF Q;  1K8A S;  1NJI S;  3CCU R;  1VQP R;  3CCV R;  1VQ7 R;  3OW2 Q;  1Q86 S;  1S72 R;  2ZJP P;  1VQ8 R;  1KC8 S;  3CCL R;  1VQN R;  1VQ4 R;  3CF5 P;  1YI2 R;  1QVG Q;  3CC2 R;  1VQK R;  5DM7 P;  5GAG T;  3PIP P;  3CCS R;  1VQL R;  5DM6 P;  1I4J A;  1Q82 S;  2QEX R;  4WFB P;  4V19 W;  3CCR R;  3CCJ R;  1YJN R;  1YIJ R;  1VQ5 R;  1VQO R;  2OTJ R;  2ZJR P;  3CCQ R;  1YIT R;  1JJ2 Q;  3J7Y T;  4U67 P;  1YJ9 R; 
#chains in the Genus database with same CATH topology
 1Q7Y S;  3NE1 A;  1W2B Q;  1M90 S;  1FTH A;  3CMA R;  2WAT A;  1Q81 S;  3J7Z S;  5HL7 P;  3CCM R;  5CXD A;  3HYK A;  3G71 R;  3CCE R;  3H7Q A;  5GAD T;  4DXE A;  2JCA A;  4IO9 P;  5GAH T;  2D0O A;  4WFN P;  1M1K S;  3GWM A;  1KD1 S;  1KQS Q;  2D0P A;  1VQM R;  4HC6 A;  1FTE A;  4WCE P;  3G6E R;  1FTF A;  3CPW Q;  3HQJ A;  3I55 R;  2QA4 R;  3DLL P;  2QG8 A;  3I56 R;  3CME R;  5JVG P;  1YJW R;  1QR0 A;  3NE3 B;  2OTL R;  1BXE A;  2C43 A;  5H1S U;  4WF9 P;  4WFA P;  3CXC Q;  5GAE T;  4UY8 S;  3G4S R;  1K9M S;  2WAS A;  4IOA P;  3PIO P;  3NE9 A;  4IOC P;  5JVH P;  3CC7 R;  1YHQ R;  1VQ6 R;  1K73 S;  3CD6 R;  3CC4 R;  5CMO A;  1N8R S;  3NFD A;  1F7T A;  2ZJQ P;  4JM7 A;  5MLC U;  1VQ9 R;  1QVF Q;  1F80 A;  1K8A S;  1NJI S;  3CCU R;  1VQP R;  2WDO A;  3CCV R;  1VQ7 R;  4MRT A;  3OW2 Q;  1Q86 S;  1S72 R;  1NBW A;  2ZJP P;  2BYD A;  1VQ8 R;  1KC8 S;  3CCL R;  1VQN R;  1VQ4 R;  3QMN A;  3CF5 P;  1YI2 R;  2WAS B;  1QVG Q;  3CC2 R;  2WDY A;  1VQK R;  5DM7 P;  5GAG T;  2WDS A;  3PIP P;  3CCS R;  1VQL R;  2JBZ A;  2CG5 A;  5DM6 P;  1I4J A;  1Q82 S;  2QEX R;  4WFB P;  2BDD A;  4V19 W;  3CCR R;  3CCJ R;  1YJN R;  1YIJ R;  1F7L A;  1VQ5 R;  1VQO R;  2OTJ R;  2ZJR P;  3CCQ R;  1YIT R;  1JJ2 Q;  3J7Y T;  4U67 P;  1YJ9 R; 
#chains in the Genus database with same CATH homology
 1Q7Y S;  1W2B Q;  1M90 S;  3CMA R;  1Q81 S;  3J7Z S;  5HL7 P;  3CCM R;  3G71 R;  3CCE R;  5GAD T;  4IO9 P;  5GAH T;  4WFN P;  1M1K S;  1KD1 S;  1KQS Q;  1VQM R;  4WCE P;  3G6E R;  3CPW Q;  2QA4 R;  3I55 R;  3DLL P;  3CME R;  3I56 R;  5JVG P;  1YJW R;  2OTL R;  1BXE A;  5H1S U;  4WF9 P;  4WFA P;  3CXC Q;  5GAE T;  4UY8 S;  3G4S R;  1K9M S;  4IOA P;  3PIO P;  4IOC P;  5JVH P;  3CC7 R;  1YHQ R;  1VQ6 R;  1K73 S;  3CD6 R;  3CC4 R;  1N8R S;  2ZJQ P;  5MLC U;  1VQ9 R;  1QVF Q;  1K8A S;  1NJI S;  3CCU R;  1VQP R;  3CCV R;  1VQ7 R;  3OW2 Q;  1Q86 S;  1S72 R;  2ZJP P;  1VQ8 R;  1KC8 S;  3CCL R;  1VQN R;  1VQ4 R;  3CF5 P;  1YI2 R;  1QVG Q;  3CC2 R;  1VQK R;  5DM7 P;  5GAG T;  3PIP P;  3CCS R;  1VQL R;  5DM6 P;  1I4J A;  1Q82 S;  2QEX R;  4WFB P;  4V19 W;  3CCR R;  3CCJ R;  1YJN R;  1YIJ R;  1VQ5 R;  1VQO R;  2OTJ R;  2ZJR P;  3CCQ R;  1YIT R;  1JJ2 Q;  3J7Y T;  4U67 P;  1YJ9 R; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...