3CLAA

Refined crystal structure of type iii chloramphenicol acetyltransferase at 1.75 angstroms resolution
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
213
structure length
213
Chain Sequence
MNYTKFDVKNWVRREHFEFYRHRLPCGFSLTSKIDITTLKKSLDDSAYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQETETFSALSCPYSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCNSKLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Refined crystal structure of type III chloramphenicol acetyltransferase at 1.75 A resolution.
pubmed doi rcsb
molecule tags Transferase (acyltransferase)
source organism Escherichia coli
molecule keywords TYPE III CHLORAMPHENICOL ACETYLTRANSFERASE
total genus 60
structure length 213
sequence length 213
ec nomenclature ec 2.3.1.28: Chloramphenicol O-acetyltransferase.
pdb deposition date 1990-07-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00302 CAT Chloramphenicol acetyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 3claA00
5KJUA 2RKTA 3L60A 2II3A 3CLAA 1QCAA 4N72A 1XL7A 4JN5A 4CLAA 5DUAA 1EAAA 1EACA 1XMDA 3MAEA 2XR7A 1EAEA 4G2MA 4KE4A 4KECA 5KJTA 3FOTA 2II4A 1CIAA 1C4TA 1EABA 1E2OA 3U9BA 3U9FA 2E1UA 2CLAA 2JGPA 5KJWA 1XMCA 2XHGA 5KJSA 2BGHA 1EADA 1Q9JA 1EAFA 1NOCB 4G22A 1CLAA 1Q23A 1XL8A 2RKVA 2VSQA 1PD5A 4JN3A 5T3EA 5FALA 3B30A 1L5AA 1DPCA 5KJVA 4G0BA 4HVMA 3FP0A 2E1VA 1DPDA 1DPBA 1SCZA 2IHWA 2II5A 2E1TA 2ZBAA 2I9DA 3B2SA 5FANA 5DU9A
chains in the Genus database with same CATH superfamily
2II3A 1XL7A 4CLAA 1XMDA 2XR7A 4KE4A 2FY2A 1CIAA 5KJWA 1XMCA 1EADA 2FY4A 4G22A 2RKVA 4JN3A 1PD5A 2H3PA 2E1VA 1DPDA 2II5A 2I9DA 1T7OA 5FANA 1T1UA 2RKTA 1Q6XA 3CLAA 4JN5A 2FYOA 1EAAA 1EAEA 1NDBA 4KECA 4EYWA 2H3WA 2RCUA 1EABA 2E1UA 2JGPA 1T7QA 1NDIA 1Q9JA 1EAFA 1CLAA 5T3EA 1L5AA 1NM8A 4G0BA 2H4TA 1DPBA 1SCZA 2IHWA 2E1TA 2ZBAA 1NDFA 2FY3A 5DU9A 5KJUA 1QCAA 5DUAA 4G2MA 1T7NA 3FOTA 2II4A 3U9BA 2CLAA 2XHGA 4EPHA 1NOCB 1XL8A 1DPCA 5KJVA 4HVMA 3B2SA 4EP9A 2H3UA 3L60A 4N72A 2FY5A 1S5OA 1EACA 3MAEA 2FW3A 5KJTA 3U9FA 1C4TA 1E2OA 5KJSA 2BGHA 1Q23A 2VSQA 5FALA 2DEBA 3B30A 3FP0A
chains in the Genus database with same CATH topology
5KJUA 2RKTA 3L60A 2II3A 3CLAA 1QCAA 4N72A 1XL7A 4JN5A 4CLAA 5DUAA 1EAAA 1EACA 1XMDA 3MAEA 2XR7A 1EAEA 4G2MA 4KE4A 4KECA 5KJTA 3FOTA 2II4A 1CIAA 1C4TA 1EABA 1E2OA 3U9BA 3U9FA 2E1UA 2CLAA 2JGPA 5KJWA 1XMCA 2XHGA 5KJSA 2BGHA 1EADA 1Q9JA 1EAFA 1NOCB 4G22A 1CLAA 1Q23A 1XL8A 2RKVA 2VSQA 1PD5A 4JN3A 5T3EA 5FALA 3B30A 1L5AA 1DPCA 5KJVA 4G0BA 4HVMA 3FP0A 2E1VA 1DPDA 1DPBA 1SCZA 2IHWA 2II5A 2E1TA 2ZBAA 2I9DA 3B2SA 5FANA 5DU9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KJU A;  2RKT A;  3L60 A;  2II3 A;  3CLA A;  1QCA A;  4N72 A;  1XL7 A;  4JN5 A;  4CLA A;  5DUA A;  1EAA A;  1EAC A;  1XMD A;  3MAE A;  2XR7 A;  1EAE A;  4G2M A;  4KE4 A;  4KEC A;  5KJT A;  3FOT A;  2II4 A;  1CIA A;  1C4T A;  1EAB A;  1E2O A;  3U9B A;  3U9F A;  2E1U A;  2CLA A;  2JGP A;  5KJW A;  1XMC A;  2XHG A;  5KJS A;  2BGH A;  1EAD A;  1Q9J A;  1EAF A;  1NOC B;  4G22 A;  1CLA A;  1Q23 A;  1XL8 A;  2RKV A;  2VSQ A;  1PD5 A;  4JN3 A;  5T3E A;  5FAL A;  3B30 A;  1L5A A;  1DPC A;  5KJV A;  4G0B A;  4HVM A;  3FP0 A;  2E1V A;  1DPD A;  1DPB A;  1SCZ A;  2IHW A;  2II5 A;  2E1T A;  2ZBA A;  2I9D A;  3B2S A;  5FAN A;  5DU9 A; 
#chains in the Genus database with same CATH topology
 2II3 A;  1XL7 A;  4CLA A;  1XMD A;  2XR7 A;  4KE4 A;  2FY2 A;  1CIA A;  5KJW A;  1XMC A;  1EAD A;  2FY4 A;  4G22 A;  2RKV A;  4JN3 A;  1PD5 A;  2H3P A;  2E1V A;  1DPD A;  2II5 A;  2I9D A;  1T7O A;  5FAN A;  1T1U A;  2RKT A;  1Q6X A;  3CLA A;  4JN5 A;  2FYO A;  1EAA A;  1EAE A;  1NDB A;  4KEC A;  4EYW A;  2H3W A;  2RCU A;  1EAB A;  2E1U A;  2JGP A;  1T7Q A;  1NDI A;  1Q9J A;  1EAF A;  1CLA A;  5T3E A;  1L5A A;  1NM8 A;  4G0B A;  2H4T A;  1DPB A;  1SCZ A;  2IHW A;  2E1T A;  2ZBA A;  1NDF A;  2FY3 A;  5DU9 A;  5KJU A;  1QCA A;  5DUA A;  4G2M A;  1T7N A;  3FOT A;  2II4 A;  3U9B A;  2CLA A;  2XHG A;  4EPH A;  1NOC B;  1XL8 A;  1DPC A;  5KJV A;  4HVM A;  3B2S A;  4EP9 A;  2H3U A;  3L60 A;  4N72 A;  2FY5 A;  1S5O A;  1EAC A;  3MAE A;  2FW3 A;  5KJT A;  3U9F A;  1C4T A;  1E2O A;  5KJS A;  2BGH A;  1Q23 A;  2VSQ A;  5FAL A;  2DEB A;  3B30 A;  3FP0 A; 
#chains in the Genus database with same CATH homology
 5KJU A;  2RKT A;  3L60 A;  2II3 A;  3CLA A;  1QCA A;  4N72 A;  1XL7 A;  4JN5 A;  4CLA A;  5DUA A;  1EAA A;  1EAC A;  1XMD A;  3MAE A;  2XR7 A;  1EAE A;  4G2M A;  4KE4 A;  4KEC A;  5KJT A;  3FOT A;  2II4 A;  1CIA A;  1C4T A;  1EAB A;  1E2O A;  3U9B A;  3U9F A;  2E1U A;  2CLA A;  2JGP A;  5KJW A;  1XMC A;  2XHG A;  5KJS A;  2BGH A;  1EAD A;  1Q9J A;  1EAF A;  1NOC B;  4G22 A;  1CLA A;  1Q23 A;  1XL8 A;  2RKV A;  2VSQ A;  1PD5 A;  4JN3 A;  5T3E A;  5FAL A;  3B30 A;  1L5A A;  1DPC A;  5KJV A;  4G0B A;  4HVM A;  3FP0 A;  2E1V A;  1DPD A;  1DPB A;  1SCZ A;  2IHW A;  2II5 A;  2E1T A;  2ZBA A;  2I9D A;  3B2S A;  5FAN A;  5DU9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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