3CMNA

Crystal structure of a putative hydrolase with a novel fold from chloroflexus aurantiacus
Total Genus 115
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
115
sequence length
350
structure length
298
Chain Sequence
LIDWEQARQAALRLSQWEQAPVDNRAFRREQYARMVALSEPLIADYLGVRLPEPVSRIFVFDRREWLEANIVSFSQLFRPIEEMYEKSSKLLGVQIGGLLGYLAQRVLGQYDLSLLSAGGSLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEFEAYPWVRTYFRELLEQNFALTPEQRAVFDRIQALMSLIEGYGNHVMNAVGRRLLPSFNQIEQQIAQRQRQRTMLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIQFASRVWERPENLPSMDEIRNPGQWIVRMDREG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
molecule keywords Putative hydrolase
publication title Crystal structure of a putative hydrolase with a novel fold from Chloroflexus aurantiacus.
rcsb
source organism Chloroflexus aurantiacus j-10-fl
total genus 115
structure length 298
sequence length 350
ec nomenclature
pdb deposition date 2008-03-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF10103 Zincin_2 Zincin-like metallopeptidase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.150.30 Mainly Alpha Up-down Bundle Lysin Lysin 3cmnA01
3CMNA
chains in the Genus database with same CATH superfamily
3FKSA 2XOKA 2WPDA 3ZIAA 2JIZA 1W0KA 2HLDA 2QE7A 4TSFA 4XD7A 5FL7A 3OEEA 1W0JA 1KMHA 3OE7A 4YXWA 1H8EA 2V7QA 2W6IA 3LYNA 1E79A 1EFRA 2JDIA 3CMNA 1E1RA 3OFNA 4ASUA 2W6JA 2LISA 5CDFA 1H8HA 1COWA 1SKYB 1MABA 1NBMA 2F43A 2JJ1A 2JJ2A 3OAAA 3OEHA 4TT3A 1LISA 2CK3A 2WSSA 1E1QA 1BMFA 1LYNA 1GAKA 2LYNA 2XNDA 1FX0A 2R9VA 5DN6A 4Z1MA 1OHHA
chains in the Genus database with same CATH topology
3FKSA 2XOKA 2WPDA 3ZIAA 2JIZA 1W0KA 2HLDA 2QE7A 4TSFA 4XD7A 5FL7A 3OEEA 1W0JA 1KMHA 3OE7A 4YXWA 1H8EA 2V7QA 2W6IA 1E79A 1EFRA 2JDIA 3CMNA 1E1RA 3OFNA 4ASUA 2W6JA 5CDFA 1H8HA 1COWA 1SKYB 1MABA 1NBMA 2F43A 2JJ1A 2JJ2A 3OAAA 3OEHA 4TT3A 2CK3A 2WSSA 1E1QA 1BMFA 2XNDA 1FX0A 2R9VA 5DN6A 4Z1MA 1OHHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CMN A; 
#chains in the Genus database with same CATH topology
 3FKS A;  2XOK A;  2WPD A;  3ZIA A;  2JIZ A;  1W0K A;  2HLD A;  2QE7 A;  4TSF A;  4XD7 A;  5FL7 A;  3OEE A;  1W0J A;  1KMH A;  3OE7 A;  4YXW A;  1H8E A;  2V7Q A;  2W6I A;  3LYN A;  1E79 A;  1EFR A;  2JDI A;  3CMN A;  1E1R A;  3OFN A;  4ASU A;  2W6J A;  2LIS A;  5CDF A;  1H8H A;  1COW A;  1SKY B;  1MAB A;  1NBM A;  2F43 A;  2JJ1 A;  2JJ2 A;  3OAA A;  3OEH A;  4TT3 A;  1LIS A;  2CK3 A;  2WSS A;  1E1Q A;  1BMF A;  1LYN A;  1GAK A;  2LYN A;  2XND A;  1FX0 A;  2R9V A;  5DN6 A;  4Z1M A;  1OHH A; 
#chains in the Genus database with same CATH homology
 3FKS A;  2XOK A;  2WPD A;  3ZIA A;  2JIZ A;  1W0K A;  2HLD A;  2QE7 A;  4TSF A;  4XD7 A;  5FL7 A;  3OEE A;  1W0J A;  1KMH A;  3OE7 A;  4YXW A;  1H8E A;  2V7Q A;  2W6I A;  1E79 A;  1EFR A;  2JDI A;  3CMN A;  1E1R A;  3OFN A;  4ASU A;  2W6J A;  5CDF A;  1H8H A;  1COW A;  1SKY B;  1MAB A;  1NBM A;  2F43 A;  2JJ1 A;  2JJ2 A;  3OAA A;  3OEH A;  4TT3 A;  2CK3 A;  2WSS A;  1E1Q A;  1BMF A;  2XND A;  1FX0 A;  2R9V A;  5DN6 A;  4Z1M A;  1OHH A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...