3CSCA

Structure of ternary complexes of citrate synthase with d-and l-malate: mechanistic implications
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
433
structure length
429
Chain Sequence
ASSTNLKDVLAALIPKEQARIKTFRQQHGGTALGQITVDMSYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKGGGGEPLPEGLFWLLVTGQIPTGAQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGILRTKYWEMVYESAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDAQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLGWLAQLQKAAGADASLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPGDPMFKLVAQLYKIVPNVLLEQGAAANPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPKSMSTDGLIAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxo-acid-lyase
molecule keywords CITRATE SYNTHASE
publication title 1.9-A structures of ternary complexes of citrate synthase with D- and L-malate: mechanistic implications.
pubmed doi rcsb
source organism Gallus gallus
total genus 149
structure length 429
sequence length 433
ec nomenclature ec 2.3.3.1: Citrate (Si)-synthase.
pdb deposition date 1990-05-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00285 Citrate_synt Citrate synthase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.230.10 Mainly Alpha Orthogonal Bundle Cytochrome p450-Terp; domain 2 Cytochrome P450-Terp, domain 2 3cscA02
1.10.580.10 Mainly Alpha Orthogonal Bundle Citrate Synthase; domain 1 Citrate Synthase, domain 1 3cscA01
5CTSA 2IFCA 1OWBA 6CTSA 2CTSA 3O8JA 1AL6A 4E6YA 4XGHA 4G6BA 3ENJA 3CSCA 4YBOA 1CSIA 4JAEA 4JAFA 2IBPA 2R9EA 2H12A 4CTSA 1AJ8A 2P2WA 1VGMA 3TQGA 1OWCA 2R26A 2C6XA 3HWKA 4JAGA 1NXEA 4JADA 3MSUA 2CSCA 6CSCA 1CSHA 1A59A 4CSCA 4TVMA 1CSSA 5CSCA 1CSRA 1NXGA 1VGPA 5CSCB 1AMZA 1CSCA 1O7XA 1IXEA 1IOMA 1CTSA
chains in the Genus database with same CATH superfamily
5CTSA 2IFCA 1OWBA 6CTSA 2CTSA 3O8JA 1AL6A 4E6YA 4XGHA 4G6BA 3ENJA 3CSCA 4YBOA 1CSIA 4JAEA 4JAFA 2IBPA 2R9EA 2H12A 4CTSA 1AJ8A 2P2WA 1VGMA 3TQGA 1OWCA 2R26A 2C6XA 3HWKA 4JAGA 1NXEA 4JADA 3MSUA 2CSCA 6CSCA 1CSHA 1A59A 4TVMA 4CSCA 1CSSA 5CSCA 1CSRA 1NXGA 1VGPA 5CSCB 1AMZA 1CSCA 1O7XA 1IXEA 1IOMA 1CTSA
chains in the Genus database with same CATH topology
5CTSA 2IFCA 1OWBA 6CTSA 2CTSA 3O8JA 1AL6A 4E6YA 4XGHA 4G6BA 3ENJA 3CSCA 4YBOA 1CSIA 4JAEA 4JAFA 2IBPA 2R9EA 2H12A 4CTSA 1AJ8A 2P2WA 1VGMA 3TQGA 1OWCA 2R26A 2C6XA 3HWKA 4JAGA 1NXEA 4JADA 3MSUA 2CSCA 6CSCA 1CSHA 1A59A 4CSCA 4TVMA 1CSSA 5CSCA 1CSRA 1NXGA 1VGPA 5CSCB 1AMZA 1CSCA 1O7XA 1IXEA 1IOMA 1CTSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5CTS A;  2IFC A;  1OWB A;  6CTS A;  2CTS A;  3O8J A;  1AL6 A;  4E6Y A;  4XGH A;  4G6B A;  3ENJ A;  3CSC A;  4YBO A;  1CSI A;  4JAE A;  4JAF A;  2IBP A;  2R9E A;  2H12 A;  4CTS A;  1AJ8 A;  2P2W A;  1VGM A;  3TQG A;  1OWC A;  2R26 A;  2C6X A;  3HWK A;  4JAG A;  1NXE A;  4JAD A;  3MSU A;  2CSC A;  6CSC A;  1CSH A;  1A59 A;  4CSC A;  4TVM A;  1CSS A;  5CSC A;  1CSR A;  1NXG A;  1VGP A;  5CSC B;  1AMZ A;  1CSC A;  1O7X A;  1IXE A;  1IOM A;  1CTS A; 
#chains in the Genus database with same CATH topology
 5CTS A;  2IFC A;  1OWB A;  6CTS A;  2CTS A;  3O8J A;  1AL6 A;  4E6Y A;  4XGH A;  4G6B A;  3ENJ A;  3CSC A;  4YBO A;  1CSI A;  4JAE A;  4JAF A;  2IBP A;  2R9E A;  2H12 A;  4CTS A;  1AJ8 A;  2P2W A;  1VGM A;  3TQG A;  1OWC A;  2R26 A;  2C6X A;  3HWK A;  4JAG A;  1NXE A;  4JAD A;  3MSU A;  2CSC A;  6CSC A;  1CSH A;  1A59 A;  4TVM A;  4CSC A;  1CSS A;  5CSC A;  1CSR A;  1NXG A;  1VGP A;  5CSC B;  1AMZ A;  1CSC A;  1O7X A;  1IXE A;  1IOM A;  1CTS A; 
#chains in the Genus database with same CATH homology
 5CTS A;  2IFC A;  1OWB A;  6CTS A;  2CTS A;  3O8J A;  1AL6 A;  4E6Y A;  4XGH A;  4G6B A;  3ENJ A;  3CSC A;  4YBO A;  1CSI A;  4JAE A;  4JAF A;  2IBP A;  2R9E A;  2H12 A;  4CTS A;  1AJ8 A;  2P2W A;  1VGM A;  3TQG A;  1OWC A;  2R26 A;  2C6X A;  3HWK A;  4JAG A;  1NXE A;  4JAD A;  3MSU A;  2CSC A;  6CSC A;  1CSH A;  1A59 A;  4CSC A;  4TVM A;  1CSS A;  5CSC A;  1CSR A;  1NXG A;  1VGP A;  5CSC B;  1AMZ A;  1CSC A;  1O7X A;  1IXE A;  1IOM A;  1CTS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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