3D41A

Crystal structure of fosfomycin resistance kinase foma from streptomyces wedmorensis complexed with mgamppnp and fosfomycin
Total Genus 77
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
77
sequence length
272
structure length
268
Chain Sequence
b'SGLVPRGSHMTPDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFSLAGLTEATFEVKKRWAEKLRGIGVDAFPLQLAAMCTLRNGIPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDDTILPEVDARSPEQAYAALWGSSEWDATGAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTAPFSSWPAHVRSTRITTT'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords FomA protein
publication title Crystal Structure of Fosfomycin Resistance Kinase FomA from Streptomyces wedmorensis.
pubmed doi rcsb
source organism Streptomyces wedmorensis
molecule tags Transferase
total genus 77
structure length 268
sequence length 272
ec nomenclature
pdb deposition date 2008-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3d41A00
3D2MA 3S6GA 4F6TB 3KZFA 3LL9A 3NWYA 4OLCA 2BNFA 3D40A 2VA1A 1B7BA 1OHBA 2E9YA 2V4YA 4AXSA 2WXBA 2R98A 2BRIA 2WE5A 3TVIA 3LKKA 2HMFA 2J0WA 4NDQB 3AB4A 2A1FA 3WWMA 4NDPB 3K52A 2BNEA 3EK6A 3ZZGA 3S6KA 3ZZFA 2OGXB 3D2PA 4NDRA 4JZ7A 3B8GA 3ZZHA 4I49A 3AB2A 4NDOA 2AKOA 3QVFA 3QUOA 2R8VA 4AB7A 2JI5A 3QUNA 2BMUA 3C1MA 3K56A 2IJ9A 2J0XA 4KZTA 4Q1TA 2BUFA 3D41A 3WWNA 2V5HA 4NDQA 2WE4A 3S6HA 4JZ9A 3QVHA 3L86A 3K4OA 2CDQA 1E19A 3AAWA 4F6TA 3U6UA 2OGXA 2BRXA 3LL5A 3C1NA 4NDOB 3L76A 2J5VA 2J5TA 2JJ4A 2BNDA 2J4JA 1GS5A 3ZZIA 4USJA 2W21A 1Z9DA 2JJXA 1YBDA 2J4KA 2BTYA 4A7XA 1OH9A 2X2WA 3T7BA 4A7WA 4NDPA 3K4YA 4JZ8A 1OHAA 4NDRB 3C20A 2J4LA 3QURA 2RD5A 3EK5A 2AP9A 1GSJA
chains in the Genus database with same CATH superfamily
3D2MA 3S6GA 4F6TB 3KZFA 3LL9A 3NWYA 4OLCA 2BNFA 3D40A 2VA1A 1B7BA 1OHBA 2E9YA 2V4YA 4AXSA 2WXBA 2R98A 2BRIA 2WE5A 3TVIA 3LKKA 2HMFA 2J0WA 4NDQB 3AB4A 2A1FA 3WWMA 4NDPB 3K52A 2BNEA 3EK6A 3ZZGA 3S6KA 3ZZFA 2OGXB 3D2PA 4NDRA 4JZ7A 3B8GA 3ZZHA 4I49A 3AB2A 4NDOA 2AKOA 3QVFA 3QUOA 2R8VA 4AB7A 2JI5A 3QUNA 2BMUA 3C1MA 3K56A 2IJ9A 2J0XA 4KZTA 4Q1TA 2BUFA 3D41A 3WWNA 2V5HA 4NDQA 2WE4A 3S6HA 4JZ9A 3QVHA 3L86A 3K4OA 2CDQA 1E19A 3AAWA 4F6TA 3U6UA 2OGXA 2BRXA 3LL5A 3C1NA 4NDOB 3L76A 2J5VA 2J5TA 2JJ4A 2BNDA 2J4JA 1GS5A 3ZZIA 4USJA 2W21A 1Z9DA 2JJXA 1YBDA 2J4KA 2BTYA 4A7XA 1OH9A 2X2WA 3T7BA 4A7WA 4NDPA 3K4YA 4JZ8A 1OHAA 4NDRB 3C20A 2J4LA 3QURA 2RD5A 3EK5A 2AP9A 1GSJA
chains in the Genus database with same CATH topology
3D2MA 3S6GA 4F6TB 3KZFA 3LL9A 3NWYA 4OLCA 2BNFA 3D40A 2VA1A 1B7BA 1OHBA 2E9YA 2V4YA 4AXSA 2WXBA 2R98A 2BRIA 2WE5A 3TVIA 3LKKA 2HMFA 2J0WA 4NDQB 3AB4A 2A1FA 3WWMA 4NDPB 3K52A 2BNEA 3EK6A 3ZZGA 3S6KA 3ZZFA 2OGXB 3D2PA 4NDRA 4JZ7A 3B8GA 3ZZHA 4I49A 3AB2A 4NDOA 2AKOA 3QVFA 3QUOA 2R8VA 4AB7A 2JI5A 3QUNA 2BMUA 3C1MA 3K56A 2IJ9A 2J0XA 4KZTA 4Q1TA 2BUFA 3D41A 3WWNA 2V5HA 4NDQA 2WE4A 3S6HA 4JZ9A 3QVHA 3L86A 3K4OA 2CDQA 1E19A 3AAWA 4F6TA 3U6UA 2OGXA 2BRXA 3LL5A 3C1NA 4NDOB 3L76A 2J5VA 2J5TA 2JJ4A 2BNDA 2J4JA 1GS5A 3ZZIA 4USJA 2W21A 1Z9DA 2JJXA 1YBDA 2J4KA 2BTYA 4A7XA 1OH9A 2X2WA 3T7BA 4A7WA 4NDPA 3K4YA 4JZ8A 1OHAA 4NDRB 3C20A 2J4LA 3QURA 2RD5A 3EK5A 2AP9A 1GSJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3D2M A;  3S6G A;  4F6T B;  3KZF A;  3LL9 A;  3NWY A;  4OLC A;  2BNF A;  3D40 A;  2VA1 A;  1B7B A;  1OHB A;  2E9Y A;  2V4Y A;  4AXS A;  2WXB A;  2R98 A;  2BRI A;  2WE5 A;  3TVI A;  3LKK A;  2HMF A;  2J0W A;  4NDQ B;  3AB4 A;  2A1F A;  3WWM A;  4NDP B;  3K52 A;  2BNE A;  3EK6 A;  3ZZG A;  3S6K A;  3ZZF A;  2OGX B;  3D2P A;  4NDR A;  4JZ7 A;  3B8G A;  3ZZH A;  4I49 A;  3AB2 A;  4NDO A;  2AKO A;  3QVF A;  3QUO A;  2R8V A;  4AB7 A;  2JI5 A;  3QUN A;  2BMU A;  3C1M A;  3K56 A;  2IJ9 A;  2J0X A;  4KZT A;  4Q1T A;  2BUF A;  3D41 A;  3WWN A;  2V5H A;  4NDQ A;  2WE4 A;  3S6H A;  4JZ9 A;  3QVH A;  3L86 A;  3K4O A;  2CDQ A;  1E19 A;  3AAW A;  4F6T A;  3U6U A;  2OGX A;  2BRX A;  3LL5 A;  3C1N A;  4NDO B;  3L76 A;  2J5V A;  2J5T A;  2JJ4 A;  2BND A;  2J4J A;  1GS5 A;  3ZZI A;  4USJ A;  2W21 A;  1Z9D A;  2JJX A;  1YBD A;  2J4K A;  2BTY A;  4A7X A;  1OH9 A;  2X2W A;  3T7B A;  4A7W A;  4NDP A;  3K4Y A;  4JZ8 A;  1OHA A;  4NDR B;  3C20 A;  2J4L A;  3QUR A;  2RD5 A;  3EK5 A;  2AP9 A;  1GSJ A; 
#chains in the Genus database with same CATH topology
 3D2M A;  3S6G A;  4F6T B;  3KZF A;  3LL9 A;  3NWY A;  4OLC A;  2BNF A;  3D40 A;  2VA1 A;  1B7B A;  1OHB A;  2E9Y A;  2V4Y A;  4AXS A;  2WXB A;  2R98 A;  2BRI A;  2WE5 A;  3TVI A;  3LKK A;  2HMF A;  2J0W A;  4NDQ B;  3AB4 A;  2A1F A;  3WWM A;  4NDP B;  3K52 A;  2BNE A;  3EK6 A;  3ZZG A;  3S6K A;  3ZZF A;  2OGX B;  3D2P A;  4NDR A;  4JZ7 A;  3B8G A;  3ZZH A;  4I49 A;  3AB2 A;  4NDO A;  2AKO A;  3QVF A;  3QUO A;  2R8V A;  4AB7 A;  2JI5 A;  3QUN A;  2BMU A;  3C1M A;  3K56 A;  2IJ9 A;  2J0X A;  4KZT A;  4Q1T A;  2BUF A;  3D41 A;  3WWN A;  2V5H A;  4NDQ A;  2WE4 A;  3S6H A;  4JZ9 A;  3QVH A;  3L86 A;  3K4O A;  2CDQ A;  1E19 A;  3AAW A;  4F6T A;  3U6U A;  2OGX A;  2BRX A;  3LL5 A;  3C1N A;  4NDO B;  3L76 A;  2J5V A;  2J5T A;  2JJ4 A;  2BND A;  2J4J A;  1GS5 A;  3ZZI A;  4USJ A;  2W21 A;  1Z9D A;  2JJX A;  1YBD A;  2J4K A;  2BTY A;  4A7X A;  1OH9 A;  2X2W A;  3T7B A;  4A7W A;  4NDP A;  3K4Y A;  4JZ8 A;  1OHA A;  4NDR B;  3C20 A;  2J4L A;  3QUR A;  2RD5 A;  3EK5 A;  2AP9 A;  1GSJ A; 
#chains in the Genus database with same CATH homology
 3D2M A;  3S6G A;  4F6T B;  3KZF A;  3LL9 A;  3NWY A;  4OLC A;  2BNF A;  3D40 A;  2VA1 A;  1B7B A;  1OHB A;  2E9Y A;  2V4Y A;  4AXS A;  2WXB A;  2R98 A;  2BRI A;  2WE5 A;  3TVI A;  3LKK A;  2HMF A;  2J0W A;  4NDQ B;  3AB4 A;  2A1F A;  3WWM A;  4NDP B;  3K52 A;  2BNE A;  3EK6 A;  3ZZG A;  3S6K A;  3ZZF A;  2OGX B;  3D2P A;  4NDR A;  4JZ7 A;  3B8G A;  3ZZH A;  4I49 A;  3AB2 A;  4NDO A;  2AKO A;  3QVF A;  3QUO A;  2R8V A;  4AB7 A;  2JI5 A;  3QUN A;  2BMU A;  3C1M A;  3K56 A;  2IJ9 A;  2J0X A;  4KZT A;  4Q1T A;  2BUF A;  3D41 A;  3WWN A;  2V5H A;  4NDQ A;  2WE4 A;  3S6H A;  4JZ9 A;  3QVH A;  3L86 A;  3K4O A;  2CDQ A;  1E19 A;  3AAW A;  4F6T A;  3U6U A;  2OGX A;  2BRX A;  3LL5 A;  3C1N A;  4NDO B;  3L76 A;  2J5V A;  2J5T A;  2JJ4 A;  2BND A;  2J4J A;  1GS5 A;  3ZZI A;  4USJ A;  2W21 A;  1Z9D A;  2JJX A;  1YBD A;  2J4K A;  2BTY A;  4A7X A;  1OH9 A;  2X2W A;  3T7B A;  4A7W A;  4NDP A;  3K4Y A;  4JZ8 A;  1OHA A;  4NDR B;  3C20 A;  2J4L A;  3QUR A;  2RD5 A;  3EK5 A;  2AP9 A;  1GSJ A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...