3D41A

Crystal structure of fosfomycin resistance kinase foma from streptomyces wedmorensis complexed with mgamppnp and fosfomycin
Total Genus 77
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
77
sequence length
272
structure length
268
Chain Sequence
SGLVPRGSHMTPDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRDHDSTHAFSLAGLTEATFEVKKRWAEKLRGIGVDAFPLQLAAMCTLRNGIPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDDTILPEVDARSPEQAYAALWGSSEWDATGAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTAPFSSWPAHVRSTRITTT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords FomA protein
publication title Crystal Structure of Fosfomycin Resistance Kinase FomA from Streptomyces wedmorensis.
pubmed doi rcsb
source organism Streptomyces wedmorensis
molecule tags Transferase
total genus 77
structure length 268
sequence length 272
ec nomenclature
pdb deposition date 2008-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3d41A00
2WXBA 2AKOA 4OLCA 2OGXB 2J4LA 3C20A 4NDPB 2JJXA 3AAWA 3ZZHA 2J5TA 4NDOB 3AB2A 2AP9A 4AB7A 2RD5A 1OHBA 3D2PA 3D40A 2A1FA 2V5HA 3S6HA 3L86A 3KZFA 3QURA 4A7WA 4JZ7A 3QVHA 1OH9A 1E19A 4F6TA 2J4KA 2HMFA 1GS5A 4I49A 3U6UA 2V4YA 2JI5A 3C1MA 4Q1TA 1OHAA 3C1NA 3LL9A 3QUNA 3K4OA 2VA1A 2J5VA 2WE4A 3D41A 3QUOA 4JZ9A 3LKKA 3ZZIA 3WWNA 4USJA 3NWYA 4NDQA 2R8VA 1GSJA 2WE5A 3EK5A 3D2MA 2J0XA 4NDRA 3QVFA 2E9YA 2JJ4A 2BMUA 4F6TB 3S6KA 3ZZGA 1Z9DA 2J4JA 1B7BA 2BUFA 2W21A 2BNEA 3K52A 4NDOA 1YBDA 2BRXA 3AB4A 2IJ9A 3T7BA 2J0WA 2CDQA 3WWMA 3L76A 2BNDA 3K4YA 3ZZFA 4KZTA 3EK6A 4AXSA 3K56A 3S6GA 3LL5A 2OGXA 2BTYA 4NDQB 2X2WA 4A7XA 2BNFA 4JZ8A 2R98A 4NDPA 2BRIA 3TVIA 4NDRB 3B8GA
chains in the Genus database with same CATH superfamily
2WXBA 2AKOA 4OLCA 2OGXB 2J4LA 3C20A 4NDPB 2JJXA 3AAWA 3ZZHA 2J5TA 4NDOB 3AB2A 2AP9A 4AB7A 2RD5A 1OHBA 3D2PA 3D40A 2A1FA 2V5HA 3S6HA 3L86A 3KZFA 3QURA 4A7WA 4JZ7A 3QVHA 1OH9A 1E19A 4F6TA 2J4KA 2HMFA 1GS5A 4I49A 3U6UA 2V4YA 2JI5A 3C1MA 4Q1TA 1OHAA 3C1NA 3LL9A 3QUNA 3K4OA 2VA1A 2J5VA 2WE4A 3D41A 3QUOA 4JZ9A 3LKKA 3ZZIA 3WWNA 4USJA 3NWYA 4NDQA 2R8VA 1GSJA 2WE5A 3EK5A 3D2MA 2J0XA 4NDRA 3QVFA 2E9YA 2JJ4A 2BMUA 4F6TB 3S6KA 3ZZGA 1Z9DA 2J4JA 1B7BA 2BUFA 2W21A 2BNEA 3K52A 4NDOA 1YBDA 2BRXA 3AB4A 2IJ9A 3T7BA 2J0WA 2CDQA 3WWMA 3L76A 2BNDA 3K4YA 3ZZFA 4KZTA 3EK6A 4AXSA 3K56A 3S6GA 3LL5A 2OGXA 2BTYA 4NDQB 2X2WA 4A7XA 2BNFA 4JZ8A 2R98A 4NDPA 2BRIA 3TVIA 4NDRB 3B8GA
chains in the Genus database with same CATH topology
2WXBA 2AKOA 4OLCA 2OGXB 2J4LA 3C20A 4NDPB 2JJXA 3AAWA 3ZZHA 2J5TA 4NDOB 3AB2A 2AP9A 4AB7A 2RD5A 1OHBA 3D2PA 3D40A 2A1FA 2V5HA 3S6HA 3L86A 3KZFA 3QURA 4A7WA 4JZ7A 3QVHA 1OH9A 1E19A 4F6TA 2J4KA 2HMFA 1GS5A 4I49A 3U6UA 2V4YA 2JI5A 3C1MA 4Q1TA 1OHAA 3C1NA 3LL9A 3QUNA 3K4OA 2VA1A 2J5VA 2WE4A 3D41A 3QUOA 4JZ9A 3LKKA 3ZZIA 3WWNA 4USJA 3NWYA 4NDQA 2R8VA 1GSJA 2WE5A 3EK5A 3D2MA 2J0XA 4NDRA 3QVFA 2E9YA 2JJ4A 2BMUA 4F6TB 3S6KA 3ZZGA 1Z9DA 2J4JA 1B7BA 2BUFA 2W21A 2BNEA 3K52A 4NDOA 1YBDA 2BRXA 3AB4A 2IJ9A 3T7BA 2J0WA 2CDQA 3WWMA 3L76A 2BNDA 3K4YA 3ZZFA 4KZTA 3EK6A 4AXSA 3K56A 3S6GA 3LL5A 2OGXA 2BTYA 4NDQB 2X2WA 4A7XA 2BNFA 4JZ8A 2R98A 4NDPA 2BRIA 3TVIA 4NDRB 3B8GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WXB A;  2AKO A;  4OLC A;  2OGX B;  2J4L A;  3C20 A;  4NDP B;  2JJX A;  3AAW A;  3ZZH A;  2J5T A;  4NDO B;  3AB2 A;  2AP9 A;  4AB7 A;  2RD5 A;  1OHB A;  3D2P A;  3D40 A;  2A1F A;  2V5H A;  3S6H A;  3L86 A;  3KZF A;  3QUR A;  4A7W A;  4JZ7 A;  3QVH A;  1OH9 A;  1E19 A;  4F6T A;  2J4K A;  2HMF A;  1GS5 A;  4I49 A;  3U6U A;  2V4Y A;  2JI5 A;  3C1M A;  4Q1T A;  1OHA A;  3C1N A;  3LL9 A;  3QUN A;  3K4O A;  2VA1 A;  2J5V A;  2WE4 A;  3D41 A;  3QUO A;  4JZ9 A;  3LKK A;  3ZZI A;  3WWN A;  4USJ A;  3NWY A;  4NDQ A;  2R8V A;  1GSJ A;  2WE5 A;  3EK5 A;  3D2M A;  2J0X A;  4NDR A;  3QVF A;  2E9Y A;  2JJ4 A;  2BMU A;  4F6T B;  3S6K A;  3ZZG A;  1Z9D A;  2J4J A;  1B7B A;  2BUF A;  2W21 A;  2BNE A;  3K52 A;  4NDO A;  1YBD A;  2BRX A;  3AB4 A;  2IJ9 A;  3T7B A;  2J0W A;  2CDQ A;  3WWM A;  3L76 A;  2BND A;  3K4Y A;  3ZZF A;  4KZT A;  3EK6 A;  4AXS A;  3K56 A;  3S6G A;  3LL5 A;  2OGX A;  2BTY A;  4NDQ B;  2X2W A;  4A7X A;  2BNF A;  4JZ8 A;  2R98 A;  4NDP A;  2BRI A;  3TVI A;  4NDR B;  3B8G A; 
#chains in the Genus database with same CATH topology
 2WXB A;  2AKO A;  4OLC A;  2OGX B;  2J4L A;  3C20 A;  4NDP B;  2JJX A;  3AAW A;  3ZZH A;  2J5T A;  4NDO B;  3AB2 A;  2AP9 A;  4AB7 A;  2RD5 A;  1OHB A;  3D2P A;  3D40 A;  2A1F A;  2V5H A;  3S6H A;  3L86 A;  3KZF A;  3QUR A;  4A7W A;  4JZ7 A;  3QVH A;  1OH9 A;  1E19 A;  4F6T A;  2J4K A;  2HMF A;  1GS5 A;  4I49 A;  3U6U A;  2V4Y A;  2JI5 A;  3C1M A;  4Q1T A;  1OHA A;  3C1N A;  3LL9 A;  3QUN A;  3K4O A;  2VA1 A;  2J5V A;  2WE4 A;  3D41 A;  3QUO A;  4JZ9 A;  3LKK A;  3ZZI A;  3WWN A;  4USJ A;  3NWY A;  4NDQ A;  2R8V A;  1GSJ A;  2WE5 A;  3EK5 A;  3D2M A;  2J0X A;  4NDR A;  3QVF A;  2E9Y A;  2JJ4 A;  2BMU A;  4F6T B;  3S6K A;  3ZZG A;  1Z9D A;  2J4J A;  1B7B A;  2BUF A;  2W21 A;  2BNE A;  3K52 A;  4NDO A;  1YBD A;  2BRX A;  3AB4 A;  2IJ9 A;  3T7B A;  2J0W A;  2CDQ A;  3WWM A;  3L76 A;  2BND A;  3K4Y A;  3ZZF A;  4KZT A;  3EK6 A;  4AXS A;  3K56 A;  3S6G A;  3LL5 A;  2OGX A;  2BTY A;  4NDQ B;  2X2W A;  4A7X A;  2BNF A;  4JZ8 A;  2R98 A;  4NDP A;  2BRI A;  3TVI A;  4NDR B;  3B8G A; 
#chains in the Genus database with same CATH homology
 2WXB A;  2AKO A;  4OLC A;  2OGX B;  2J4L A;  3C20 A;  4NDP B;  2JJX A;  3AAW A;  3ZZH A;  2J5T A;  4NDO B;  3AB2 A;  2AP9 A;  4AB7 A;  2RD5 A;  1OHB A;  3D2P A;  3D40 A;  2A1F A;  2V5H A;  3S6H A;  3L86 A;  3KZF A;  3QUR A;  4A7W A;  4JZ7 A;  3QVH A;  1OH9 A;  1E19 A;  4F6T A;  2J4K A;  2HMF A;  1GS5 A;  4I49 A;  3U6U A;  2V4Y A;  2JI5 A;  3C1M A;  4Q1T A;  1OHA A;  3C1N A;  3LL9 A;  3QUN A;  3K4O A;  2VA1 A;  2J5V A;  2WE4 A;  3D41 A;  3QUO A;  4JZ9 A;  3LKK A;  3ZZI A;  3WWN A;  4USJ A;  3NWY A;  4NDQ A;  2R8V A;  1GSJ A;  2WE5 A;  3EK5 A;  3D2M A;  2J0X A;  4NDR A;  3QVF A;  2E9Y A;  2JJ4 A;  2BMU A;  4F6T B;  3S6K A;  3ZZG A;  1Z9D A;  2J4J A;  1B7B A;  2BUF A;  2W21 A;  2BNE A;  3K52 A;  4NDO A;  1YBD A;  2BRX A;  3AB4 A;  2IJ9 A;  3T7B A;  2J0W A;  2CDQ A;  3WWM A;  3L76 A;  2BND A;  3K4Y A;  3ZZF A;  4KZT A;  3EK6 A;  4AXS A;  3K56 A;  3S6G A;  3LL5 A;  2OGX A;  2BTY A;  4NDQ B;  2X2W A;  4A7X A;  2BNF A;  4JZ8 A;  2R98 A;  4NDP A;  2BRI A;  3TVI A;  4NDR B;  3B8G A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...