3D4EA

Crystal structure of putative beta-lactamase inhibitor protein (np_721579.1) from streptococcus mutans at 1.40 a resolution
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
162
structure length
162
Chain Sequence
b'KTENLDFRLSFNKIKVTTDQNHFSGGTSIEQLKQWFGDPNKSEQRNAGNITLDSYTWVKDGAVINAQLYKNSTVARSISNFSFSREAKIGKEDYDELKIGESYKKIVEKLGEPDVLSQSMSSDKEEMQTVWSSGIKTKSSSATIELYFENGLLKNKTQKDLE'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords putative beta-lactamase inhibitor protein
publication title Crystal structure of putative beta-lactamase inhibitor protein (NP_721579.1) from STREPTOCOCCUS MUTANS at 1.40 A resolution
rcsb
source organism Streptococcus mutans
molecule tags Hydrolase
total genus 44
structure length 162
sequence length 162
ec nomenclature
pdb deposition date 2008-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12978 DUF3862 Domain of Unknown Function with PDB structure (DUF3862)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1450.10 Alpha Beta 2-Layer Sandwich Beta-lactamase Inhibitory Protein; Chain:B, domain 1 Beta-lactamase Inhibitory Protein; Chain:B, domain 1 3d4eA01
3.30.1450.10 Alpha Beta 2-Layer Sandwich Beta-lactamase Inhibitory Protein; Chain:B, domain 1 Beta-lactamase Inhibitory Protein; Chain:B, domain 1 3d4eA02
2PXGA 5D0QE 3C4PB 1S0WC 3E2KC 3C7VB 2G2WB 2B5RC 4DM5A 5EKQE 3D4EA 3E2LC 1XXMC 5D0OE 1JTGB 3N4IB 3GMUB 5AYWE 2G2UB 2KXXA 2KM7A 3C7UB 3C4OB 2YH9A
chains in the Genus database with same CATH superfamily
4L1RA 2PXGA 2GUMA 5D0QE 3C4PB 1S0WC 3NWFA 3NW8A 4HSIA 3E2KC 3NWAA 3C7VB 2G2WB 2B5RC 4DM5A 5EKQE 3D4EA 3E2LC 3FVCA 1XXMC 5D0OE 1JTGB 3N4IB 3NWDA 3GMUB 5AYWE 2G2UB 2KXXA 2KM7A 3C7UB 3C4OB 2YH9A
chains in the Genus database with same CATH topology
4L1RA 2PXGA 2GUMA 5D0QE 3C4PB 1S0WC 3NWFA 3NW8A 4HSIA 3E2KC 3NWAA 3C7VB 2G2WB 2B5RC 4DM5A 5EKQE 3D4EA 3E2LC 3FVCA 1XXMC 5D0OE 1JTGB 3N4IB 3NWDA 3GMUB 5AYWE 2G2UB 2KXXA 2KM7A 3C7UB 3C4OB 2YH9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PXG A;  5D0Q E;  3C4P B;  1S0W C;  3E2K C;  3C7V B;  2G2W B;  2B5R C;  4DM5 A;  5EKQ E;  3D4E A;  3E2L C;  1XXM C;  5D0O E;  1JTG B;  3N4I B;  3GMU B;  5AYW E;  2G2U B;  2KXX A;  2KM7 A;  3C7U B;  3C4O B;  2YH9 A; 
#chains in the Genus database with same CATH topology
 4L1R A;  2PXG A;  2GUM A;  5D0Q E;  3C4P B;  1S0W C;  3NWF A;  3NW8 A;  4HSI A;  3E2K C;  3NWA A;  3C7V B;  2G2W B;  2B5R C;  4DM5 A;  5EKQ E;  3D4E A;  3E2L C;  3FVC A;  1XXM C;  5D0O E;  1JTG B;  3N4I B;  3NWD A;  3GMU B;  5AYW E;  2G2U B;  2KXX A;  2KM7 A;  3C7U B;  3C4O B;  2YH9 A; 
#chains in the Genus database with same CATH homology
 4L1R A;  2PXG A;  2GUM A;  5D0Q E;  3C4P B;  1S0W C;  3NWF A;  3NW8 A;  4HSI A;  3E2K C;  3NWA A;  3C7V B;  2G2W B;  2B5R C;  4DM5 A;  5EKQ E;  3D4E A;  3E2L C;  3FVC A;  1XXM C;  5D0O E;  1JTG B;  3N4I B;  3NWD A;  3GMU B;  5AYW E;  2G2U B;  2KXX A;  2KM7 A;  3C7U B;  3C4O B;  2YH9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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