3D4EA

Crystal structure of putative beta-lactamase inhibitor protein (np_721579.1) from streptococcus mutans at 1.40 a resolution
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
162
structure length
162
Chain Sequence
KTENLDFRLSFNKIKVTTDQNHFSGGTSIEQLKQWFGDPNKSEQRNAGNITLDSYTWVKDGAVINAQLYKNSTVARSISNFSFSREAKIGKEDYDELKIGESYKKIVEKLGEPDVLSQSMSSDKEEMQTVWSSGIKTKSSSATIELYFENGLLKNKTQKDLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords putative beta-lactamase inhibitor protein
publication title Crystal structure of putative beta-lactamase inhibitor protein (NP_721579.1) from STREPTOCOCCUS MUTANS at 1.40 A resolution
rcsb
source organism Streptococcus mutans
total genus 44
structure length 162
sequence length 162
ec nomenclature
pdb deposition date 2008-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12978 DUF3862 Domain of Unknown Function with PDB structure (DUF3862)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1450.10 Alpha Beta 2-Layer Sandwich Beta-lactamase Inhibitory Protein; Chain:B, domain 1 Beta-lactamase Inhibitory Protein; Chain:B, domain 1 3d4eA01
3.30.1450.10 Alpha Beta 2-Layer Sandwich Beta-lactamase Inhibitory Protein; Chain:B, domain 1 Beta-lactamase Inhibitory Protein; Chain:B, domain 1 3d4eA02
1JTGB 3D4EA 2G2WB 2KM7A 5EKQE 3E2LC 3GMUB 2YH9A 1XXMC 3E2KC 3C7UB 3C4OB 3N4IB 2B5RC 4DM5A 3C4PB 2KXXA 2G2UB 5D0QE 5AYWE 3C7VB 1S0WC 2PXGA 5D0OE
chains in the Genus database with same CATH superfamily
1JTGB 3FVCA 3D4EA 4L1RA 3NW8A 2G2WB 3NWDA 2KM7A 3NWAA 4HSIA 5EKQE 2GUMA 3E2LC 3GMUB 2YH9A 1XXMC 3E2KC 3C7UB 3C4OB 3N4IB 2B5RC 4DM5A 3C4PB 2KXXA 3NWFA 2G2UB 5D0QE 5AYWE 3C7VB 1S0WC 2PXGA 5D0OE
chains in the Genus database with same CATH topology
1JTGB 3FVCA 3D4EA 4L1RA 3NW8A 2G2WB 3NWDA 2KM7A 3NWAA 4HSIA 5EKQE 2GUMA 3E2LC 3GMUB 2YH9A 1XXMC 3E2KC 3C7UB 3C4OB 3N4IB 2B5RC 4DM5A 3C4PB 2KXXA 3NWFA 2G2UB 5D0QE 5AYWE 3C7VB 1S0WC 2PXGA 5D0OE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1JTG B;  3D4E A;  2G2W B;  2KM7 A;  5EKQ E;  3E2L C;  3GMU B;  2YH9 A;  1XXM C;  3E2K C;  3C7U B;  3C4O B;  3N4I B;  2B5R C;  4DM5 A;  3C4P B;  2KXX A;  2G2U B;  5D0Q E;  5AYW E;  3C7V B;  1S0W C;  2PXG A;  5D0O E; 
#chains in the Genus database with same CATH topology
 1JTG B;  3FVC A;  3D4E A;  4L1R A;  3NW8 A;  2G2W B;  3NWD A;  2KM7 A;  3NWA A;  4HSI A;  5EKQ E;  2GUM A;  3E2L C;  3GMU B;  2YH9 A;  1XXM C;  3E2K C;  3C7U B;  3C4O B;  3N4I B;  2B5R C;  4DM5 A;  3C4P B;  2KXX A;  3NWF A;  2G2U B;  5D0Q E;  5AYW E;  3C7V B;  1S0W C;  2PXG A;  5D0O E; 
#chains in the Genus database with same CATH homology
 1JTG B;  3FVC A;  3D4E A;  4L1R A;  3NW8 A;  2G2W B;  3NWD A;  2KM7 A;  3NWA A;  4HSI A;  5EKQ E;  2GUM A;  3E2L C;  3GMU B;  2YH9 A;  1XXM C;  3E2K C;  3C7U B;  3C4O B;  3N4I B;  2B5R C;  4DM5 A;  3C4P B;  2KXX A;  3NWF A;  2G2U B;  5D0Q E;  5AYW E;  3C7V B;  1S0W C;  2PXG A;  5D0O E; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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