3DXJA

Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic myxopyronin
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
231
structure length
231
Chain Sequence
b'MLDSKLKAPVFTVRTQGREYGEFVLEPLERGFGVTLGNPLRRILLSSIPGTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKELVVRFLNPSLQTVTLLLKAEGPKEVKARDFLPVADVEIMNPDLHIATLEEGGRLNMEVRVDRGVGYVPAEKHGIKDRINAIPVDAVFSPVRRVAFQVEDTRLGQRTDLDKLTLRIWTDGSVTPLEALNQAVEILREHLTYFSNPQAA'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The RNA polymerase "switch region" is a target for inhibitors.
pubmed doi rcsb
molecule keywords DNA-directed RNA polymerase subunit alpha; CHAIN A, B, K, L
molecule tags Transcription,transferase
total genus 48
structure length 231
sequence length 231
chains with identical sequence B, K, L
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2008-07-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
A PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
A PF03118 RNA_pol_A_CTD Bacterial RNA polymerase, alpha chain C terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3dxjA02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3dxjA01
4MQ9A 3S14K 4A3IK 4A3KC 4Q5SA 1TWHK 2NVXK 3S1MC 2Y0SD 1WCMC 1SFOK 2Y0SL 4YFXA 4XLNA 4X6AC 4A3MK 1I6HK 2NVTK 5IYCC 2PPBA 3S16K 4A3EK 1Y1VK 4A3BC 4OIOA 5M3MK 4C3JK 4BBSC 4XLPA 4BY7C 4BXXK 4ZH4A 2JA7C 3GTPC 1Y1WK 3HOZK 3GTOK 3PO3K 3GTQK 2R92K 2VUMK 5C3EK 2JA8C 3I4NK 4QIWD 3GTKC 4MEXA 4QIWL 1YNNA 4A3GC 3S2DK 3HOWC 1TWGK 1TWAC 1ZYRA 3K7AC 4LK0A 2R93K 3DXJA 3GTJC 4A3DK 1YNJA 5FLMC 4Q4ZA 3S1RC 4A3LK 2O5IA 3H0GC 5IP7C 5TMCA 2E2HC 4OINA 3HOYC 1R9TK 2YU9K 2E2IC 3PO2C 4C2MC 1I3QC 4C3HC 3HOUC 2CW0A 3GTLC 5C44C 2NVYK 1TWFC 3I4MK 3H3VD 3CQZC 1I50K 5M5XK 4YFNA 3H3VL 3M4OC 2R7ZK 5M5YK 3WODA 3S1NK 2NVQK 5C4XK 1TWCC 1BDFA 4QJVA 4JK1A 3S1QK 3S17K 2E2JC 2BE5A 4GZYA 4YFKA 4A3KK 2JA6K 4Y52C 4A93C 2PMZD 4A3MC 3S1MK 1WCMK 2PMZL 5D4DA 1K83K 3M3YC 4LLGA 1IW7A 3S2HC 5IYCK 3RZOC 4X6AK 3HKZD 4BBSK 3HKZL 4BY7K 2JA7K 2WAQD 4A3JC 4BY1C 3FKIK 3GTPK 4C3IC 5IYDC 2JA5C 5IP9C 2B63C 3GTKK 4OIPA 3S15C 4A3FC 3GTGC 4A3GK 5IYBC 1XPPA 3HOWK 1TWAK 4Y7NC 3K7AK 3HOVC 3RZDC 3GTMC 1HQMA 4BBRC 3GTJK 4A3LC 4A3CC 5FLMK 3S1RK 5M5WK 3HOYK 5C4XC 3H0GK 5IP7K 5C4JC 3HOXK 2E2HK 4KN7A 2E2IK 3PO2K 1I3QK 2A68A 4KN4A 4OIQA 2NVYC 4OIRA 3S14C 4A3IC 2NVXC 1TWHC 2O5JA 4NOIA 1TWFK 5C44K 3GTLK 1SFOC 3CQZK 1I6HC 4QJVB 3M4OK 2NVTC 3S16C 4A3EC 1Y1VC 2A6HA 4C3JC 1TWCK 4A3BK 4BXXC 3S17C 4LK1A 1Y1WC 3GTOC 3HOZC 3PO3C 4G7ZA 3GTQC 2R92C 2VUMC 2WAQL 5C3EC 2E2JK 2JA6C 2A6EA 3I4NC 2JA8K 4A93K 4AYBD 4Y52K 1K83C 4AYBL 2A69A 3M3YK 3S2HK 3S2DC 3RZOK 1TWGC 2R93C 4A3DC 1I6VA 2WB1D 3FKIC 2WB1L 2YU9C 4A3JK 4BY1K 1R9TC 5TMFA 4KMUA 4G7OA 4C3IK 5IYDK 5M3FK 4LJZA 5FJ8K 5IP9K 4C2MK 2PA8D 4C3HK 2JA5K 2B63K 2PA8L 4A3FK 4XSXA 3GTGK 3I4MC 3S15K 5IYBK 1SMYA 1I50C 4MEYA 4G7HA 2R7ZC 4Y7NK 3HOVK 3RZDK 3GTMK 4BBRK 3EQLA 4YG2A 2NVQC 3S1NC 3HOUK 3HOXC 4A3CK 4XSZA 5C4JK 3S1QC
chains in the Genus database with same CATH superfamily
4WFAS 1WQHA 4MQ9A 3CQZA 1WCMC 2Y0SL 4G0UA 2NVTK 5IYCC 5IOSA 4LQYA 4A3EK 1XZPA 1XXCA 1TWCA 4BBSC 3MMLB 4XLPA 4BXXK 2D6FC 2JA7A 3HOZK 3GTOK 3GTQK 4MEXA 3GTKA 1EK8A 3ADAC 3S2DK 1TWGK 3K7AC 1JOEA 4XCHA 3GTJC 5FLMC 3S1RC 2O5IA 5IP7C 5TMCA 1ZVUA 1VJEA 2JA5A 3FHZA 2XCOA 1FEUA 3H3VL 2GSOA 4KMDA 2R7ZK 3WODA 4IO9S 5EGEA 1DCPA 1VLOA 2W7VA 3S17K 2BE5A 2NVXA 4GZYA 4YFKA 1J6XA 3G4AA 1SFOA 1WCMK 2PMZL 2V6UA 5D4DA 3S2HC 4P5AA 5IYCK 3HKZD 4M1XA 4WFBS 4BBSK 1EI6A 5EGHA 3GDZA 2WAQD 4BY1C 1YCLA 5IYDC 5IP9C 2B63C 4BLAA 3S15C 4A3FC 2P8TA 3GTGA 2XCRB 3BP3A 3GSIA 3K7AK 3GTMA 3GTJK 5FLMK 3S1RK 5IP7K 4BLBA 3AH5A 3SZZA 2KWAA 4KN7A 2A68A 2NVYC 1O2FB 4GTDA 1BJTA 4GTEA 3S16C 1XZQA 2ZJRS 1F9NA 4C3JC 1F7VA 1Y1WC 1USMA 1O2AA 2R92C 5C3EC 2JA6C 4BKWA 2JA8K 1RU0A 3A8IA 1K83C 4AYBL 2A69A 3GEHA 3S2HK 2R93C 2RGRA 1C0AA 4A3DC 3HXAA 4FM9A 2WB1D 3GTPA 4BY1K 5HL8A 1R9TA 5IYDK 4LJZA 5IP9K 2B63K 4GFQA 1VH2A 3S15K 4A3FK 1EH1A 3PIOS 4WFNS 1IBAA 4KB2A 1I50A 4G7HA 2NVQC 3CAGA 3HOXC 2E2HA 4KDDA 4KMHA 1I3QA 4A3KC 5IOQA 3N3YA 3CF5S 4A3MK 4X6AC 2PPBA 3S16K 3TFJA 1BS2A 1UV7A 4C3JK 3G4CA 5JVGS 2JA7C 1Y1WK 2L5NA 1WQFA 3IPJA 2R92K 5C3EK 4QIWD 3GTKC 1YNNA 2GAHC 3QX3A 4IOCS 1TWAC 1ZYRA 2R93K 4A3DK 4Q4ZA 3HOYC 4C2MC 3HOUC 4C3HC 3T00A 2CW0A 4LOWA 1EFWA 5JVHS 4YFNA 5JVOA 4KM8A 4WILA 1XXBA 2NVQK 4JK1A 3NUHA 2CFAA 2P5MA 4A3KK 1XZPB 1USOA 2V6SA 4X6AK 3M3YC 3TFHA 1O27A 2KPUA 2JA7K 3GTOA 3FKIK 3GTKK 3GTGC 1DCOA 2EBBA 1TWAK 4Y7NC 3RZDC 3GTMC 2GSUA 4A3LC 4A3CC 5M5WK 3HOYK 5C4JC 5C4XK 4RMFA 1IL2A 3HOUK 4OIRA 1F93A 1TWHA 3T02A 1L0WA 4GTLA 2XCQA 1O24A 1Y1VA 2A6HA 1VGXA 3AD7C 4GTCA 3PO3C 2PHCB 4G7ZA 1O25A 2VUMA 4KC6A 3I4NC 3AD9C 4P5BA 3M3YK 3T01A 1B4AA 1WOOA 5E68A 1HI9A 2YU9C 1R9TC 4KMUA 2PA8L 3GTGK 4U67S 4PABA 1I50C 4Y7NK 3RZDK 3GTMK 4YG2A 3S1NC 4A3CK 4XSZA 3VA7A 5C4JK 3DLLS 5CHPA 3S1QC 2ZUEA 4Q5SA 1XZQB 2Y0SD 4YFXA 4WCES 5HQHA 4OIOA 4A3BC 2Y3PA 5IOTA 5M3MK 3L4JA 4ZH4A 3AQOA 3PO3K 3I4NK 1X31C 3HOWC 4LK0A 3DXJA 1YNJA 3H0GC 2YU9K 1G51A 1R9TK 1WOPA 3PO2C 2E2IA 2B63A 3GTLA 2NVYK 1TWFA 3H3VD 3CQZC 1I50K 5IORA 3S0XA 5M5XK 5M5YK 4GTBA 5L46A 1PJ5A 1B4BA 3S1NK 1TWCC 1BDFA 4QJVA 3S1QK 2JH3A 4KAWX 2JA6K 4Y52C 3AQPA 2PMZD 3LPXA 2GAGC 1K83K 3RZOC 1J6VA 3HKZL 1O28A 2R92A 4G0WA 2JA5C 2ZUFA 5IYBC 1XPPA 3HOWK 1HQMA 3H0GK 3A8JA 3HOXK 1JVIA 3PO2K 1IS1A 4OIQA 3S14C 4A3IC 2NVXC 1TWHC 2O5JA 4NOIA 1JQWA 1SFOC 3CQZK 1I6HC 2FQTA 1ZQ1C 1GE9A 1Y1VC 2CFAB 4GTFA 4PAAA 3LYWA 1TWCK 2V6TA 3S17C 4LK1A 1F7UA 2VUMC 3GTQA 4GT9A 2A6EA 4Y52K 1IQ0A 4AYBD 4O2DA 3RZOK 1TWGA 4KM9A 3GEIA 2WB1L 3FKIA 5TMFA 3SZYA 5DM6S 4ILDA 2JA5K 4C2MK 4C3HK 4G0VA 3JSTA 3I4MC 5IYBK 1SMYA 5DM7S 1TWAA 2R7ZA 3EQLA 2GSNA 3GEEA 4C45A 3ERED 1O2BA 3S14K 1WSVA 4A3IK 1EQRA 1TWHK 2NVXK 1J98A 3S1MC 1SFOK 1WCMA 4XLNA 3N0BA 3TTGA 1I6HK 1BGWA 3OEPA 1Y1VK 4BY7C 3GTPC 2VUMK 2JA8C 1IE0A 1XXAA 4QIWL 4FZBA 2ZJPS 4A3GC 3AD8C 3BP8C 3OPFA 3GTJA 4A3LK 2E2HC 4LR2A 4OINA 3OREA 1PJ7A 4KB4A 2E2IC 1ISEA 1I3QC 3GTLC 5C44C 1TWFC 3I4MK 5TJ3A 3M4OC 3TFIA 4WJ4A 4KARA 2E2JC 2ZJQS 1V5VA 4KATA 2ZFZA 4A93C 3N0CA 5CJ9A 4A3MC 3S1MK 3V4GA 1DCHA 4LLGA 1IW7A 1KQ4A 1ZBSA 4WJ3M 1DD5A 4BY7K 4A3JC 4AH6A 3GTPK 4C3IC 1PJ6A 2RH6A 1WORA 1WIHA 4OIPA 3FOEA 4A3GK 5HL7S 3HOVC 2KXYA 4BBRC 3FOFA 1AB4A 3PIPS 2YU9A 2E2HK 1VRQC 4KMAA 1WQGA 2E2IK 2FQOA 2KQ1A 1I3QK 4KN4A 3GTLK 2NVYA 1ZXOA 4KASA 5C44K 1TWFK 3L4KA 4QJVB 3M4OK 2NVTC 4A3EC 3BUEA 4A3BK 4BXXC 3HOZC 3GTOC 1Y1WA 3GTQC 2E2JK 1WSRA 2WAQL 1INNA 2JA6A 4A93K 4GTAA 1K83A 3LAJA 3S2DC 1TWGC 4IOAS 2L3UA 2R93A 4DDQA 1I6VA 1YX2A 3FKIC 1O26A 4A3JK 1WOSA 3A8KA 4C3IK 4G7OA 1O29A 3Q3QA 5M3FK 5FJ8K 2PA8D 4XSXA 4MEYA 4J3NA 2R7ZC 3HOVK 4BBRK 5JFEA 4WF9S 3GIRA 3H0GA 3LAPA 1J6WA 4P9SA 5C4XC
chains in the Genus database with same CATH topology
4MQ9A 3S14K 4A3IK 4A3KC 4Q5SA 1TWHK 2NVXK 3S1MC 2Y0SD 1WCMC 1SFOK 2Y0SL 4YFXA 4XLNA 4X6AC 4A3MK 1I6HK 2NVTK 5IYCC 2PPBA 3S16K 4A3EK 1Y1VK 4A3BC 4OIOA 5M3MK 4C3JK 4BBSC 4XLPA 4BY7C 4BXXK 4ZH4A 2JA7C 3GTPC 1Y1WK 3HOZK 3GTOK 3PO3K 3GTQK 2R92K 2VUMK 5C3EK 2JA8C 3I4NK 4QIWD 3GTKC 4MEXA 4QIWL 1YNNA 4A3GC 3S2DK 3HOWC 1TWGK 1TWAC 1ZYRA 3K7AC 4LK0A 2R93K 3DXJA 3GTJC 4A3DK 1YNJA 5FLMC 4Q4ZA 3S1RC 4A3LK 2O5IA 3H0GC 5IP7C 5TMCA 2E2HC 4OINA 3HOYC 1R9TK 2YU9K 2E2IC 3PO2C 4C2MC 1I3QC 4C3HC 3HOUC 2CW0A 3GTLC 5C44C 2NVYK 1TWFC 3I4MK 3H3VD 3CQZC 1I50K 5M5XK 4YFNA 3H3VL 3M4OC 2R7ZK 5M5YK 3WODA 3S1NK 2NVQK 5C4XK 1TWCC 1BDFA 4QJVA 4JK1A 3S1QK 3S17K 2E2JC 2BE5A 4GZYA 4YFKA 4A3KK 2JA6K 4Y52C 4A93C 2PMZD 4A3MC 3S1MK 1WCMK 2PMZL 5D4DA 1K83K 3M3YC 4LLGA 1IW7A 3S2HC 5IYCK 3RZOC 4X6AK 3HKZD 4BBSK 3HKZL 4BY7K 2JA7K 2WAQD 4A3JC 4BY1C 3FKIK 3GTPK 4C3IC 5IYDC 2JA5C 5IP9C 2B63C 3GTKK 4OIPA 3S15C 4A3FC 3GTGC 4A3GK 5IYBC 1XPPA 3HOWK 1TWAK 4Y7NC 3K7AK 3HOVC 3RZDC 3GTMC 1HQMA 4BBRC 3GTJK 4A3LC 4A3CC 5FLMK 3S1RK 5M5WK 3HOYK 5C4XC 3H0GK 5IP7K 5C4JC 3HOXK 2E2HK 4KN7A 2E2IK 3PO2K 1I3QK 2A68A 4KN4A 4OIQA 2NVYC 4OIRA 3S14C 4A3IC 2NVXC 1TWHC 2O5JA 4NOIA 1TWFK 5C44K 3GTLK 1SFOC 3CQZK 1I6HC 4QJVB 3M4OK 2NVTC 3S16C 4A3EC 1Y1VC 2A6HA 4C3JC 1TWCK 4A3BK 4BXXC 3S17C 4LK1A 1Y1WC 3GTOC 3HOZC 3PO3C 4G7ZA 3GTQC 2R92C 2VUMC 2WAQL 5C3EC 2E2JK 2JA6C 2A6EA 3I4NC 2JA8K 4A93K 4AYBD 4Y52K 1K83C 4AYBL 2A69A 3M3YK 3S2HK 3S2DC 3RZOK 1TWGC 2R93C 4A3DC 1I6VA 2WB1D 3FKIC 2WB1L 2YU9C 4A3JK 4BY1K 1R9TC 5TMFA 4KMUA 4G7OA 4C3IK 5IYDK 5M3FK 4LJZA 5FJ8K 5IP9K 4C2MK 2PA8D 4C3HK 2JA5K 2B63K 2PA8L 4A3FK 4XSXA 3GTGK 3I4MC 3S15K 5IYBK 1SMYA 1I50C 4MEYA 4G7HA 2R7ZC 4Y7NK 3HOVK 3RZDK 3GTMK 4BBRK 3EQLA 4YG2A 2NVQC 3S1NC 3HOUK 3HOXC 4A3CK 4XSZA 5C4JK 3S1QC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4MQ9 A;  3S14 K;  4A3I K;  4A3K C;  4Q5S A;  1TWH K;  2NVX K;  3S1M C;  2Y0S D;  1WCM C;  1SFO K;  2Y0S L;  4YFX A;  4XLN A;  4X6A C;  4A3M K;  1I6H K;  2NVT K;  5IYC C;  2PPB A;  3S16 K;  4A3E K;  1Y1V K;  4A3B C;  4OIO A;  5M3M K;  4C3J K;  4BBS C;  4XLP A;  4BY7 C;  4BXX K;  4ZH4 A;  2JA7 C;  3GTP C;  1Y1W K;  3HOZ K;  3GTO K;  3PO3 K;  3GTQ K;  2R92 K;  2VUM K;  5C3E K;  2JA8 C;  3I4N K;  4QIW D;  3GTK C;  4MEX A;  4QIW L;  1YNN A;  4A3G C;  3S2D K;  3HOW C;  1TWG K;  1TWA C;  1ZYR A;  3K7A C;  4LK0 A;  2R93 K;  3DXJ A;  3GTJ C;  4A3D K;  1YNJ A;  5FLM C;  4Q4Z A;  3S1R C;  4A3L K;  2O5I A;  3H0G C;  5IP7 C;  5TMC A;  2E2H C;  4OIN A;  3HOY C;  1R9T K;  2YU9 K;  2E2I C;  3PO2 C;  4C2M C;  1I3Q C;  4C3H C;  3HOU C;  2CW0 A;  3GTL C;  5C44 C;  2NVY K;  1TWF C;  3I4M K;  3H3V D;  3CQZ C;  1I50 K;  5M5X K;  4YFN A;  3H3V L;  3M4O C;  2R7Z K;  5M5Y K;  3WOD A;  3S1N K;  2NVQ K;  5C4X K;  1TWC C;  1BDF A;  4QJV A;  4JK1 A;  3S1Q K;  3S17 K;  2E2J C;  2BE5 A;  4GZY A;  4YFK A;  4A3K K;  2JA6 K;  4Y52 C;  4A93 C;  2PMZ D;  4A3M C;  3S1M K;  1WCM K;  2PMZ L;  5D4D A;  1K83 K;  3M3Y C;  4LLG A;  1IW7 A;  3S2H C;  5IYC K;  3RZO C;  4X6A K;  3HKZ D;  4BBS K;  3HKZ L;  4BY7 K;  2JA7 K;  2WAQ D;  4A3J C;  4BY1 C;  3FKI K;  3GTP K;  4C3I C;  5IYD C;  2JA5 C;  5IP9 C;  2B63 C;  3GTK K;  4OIP A;  3S15 C;  4A3F C;  3GTG C;  4A3G K;  5IYB C;  1XPP A;  3HOW K;  1TWA K;  4Y7N C;  3K7A K;  3HOV C;  3RZD C;  3GTM C;  1HQM A;  4BBR C;  3GTJ K;  4A3L C;  4A3C C;  5FLM K;  3S1R K;  5M5W K;  3HOY K;  5C4X C;  3H0G K;  5IP7 K;  5C4J C;  3HOX K;  2E2H K;  4KN7 A;  2E2I K;  3PO2 K;  1I3Q K;  2A68 A;  4KN4 A;  4OIQ A;  2NVY C;  4OIR A;  3S14 C;  4A3I C;  2NVX C;  1TWH C;  2O5J A;  4NOI A;  1TWF K;  5C44 K;  3GTL K;  1SFO C;  3CQZ K;  1I6H C;  4QJV B;  3M4O K;  2NVT C;  3S16 C;  4A3E C;  1Y1V C;  2A6H A;  4C3J C;  1TWC K;  4A3B K;  4BXX C;  3S17 C;  4LK1 A;  1Y1W C;  3GTO C;  3HOZ C;  3PO3 C;  4G7Z A;  3GTQ C;  2R92 C;  2VUM C;  2WAQ L;  5C3E C;  2E2J K;  2JA6 C;  2A6E A;  3I4N C;  2JA8 K;  4A93 K;  4AYB D;  4Y52 K;  1K83 C;  4AYB L;  2A69 A;  3M3Y K;  3S2H K;  3S2D C;  3RZO K;  1TWG C;  2R93 C;  4A3D C;  1I6V A;  2WB1 D;  3FKI C;  2WB1 L;  2YU9 C;  4A3J K;  4BY1 K;  1R9T C;  5TMF A;  4KMU A;  4G7O A;  4C3I K;  5IYD K;  5M3F K;  4LJZ A;  5FJ8 K;  5IP9 K;  4C2M K;  2PA8 D;  4C3H K;  2JA5 K;  2B63 K;  2PA8 L;  4A3F K;  4XSX A;  3GTG K;  3I4M C;  3S15 K;  5IYB K;  1SMY A;  1I50 C;  4MEY A;  4G7H A;  2R7Z C;  4Y7N K;  3HOV K;  3RZD K;  3GTM K;  4BBR K;  3EQL A;  4YG2 A;  2NVQ C;  3S1N C;  3HOU K;  3HOX C;  4A3C K;  4XSZ A;  5C4J K;  3S1Q C; 
#chains in the Genus database with same CATH topology
 4WFA S;  1WQH A;  4MQ9 A;  3CQZ A;  1WCM C;  2Y0S L;  4G0U A;  2NVT K;  5IYC C;  5IOS A;  4LQY A;  4A3E K;  1XZP A;  1XXC A;  1TWC A;  4BBS C;  3MML B;  4XLP A;  4BXX K;  2D6F C;  2JA7 A;  3HOZ K;  3GTO K;  3GTQ K;  4MEX A;  3GTK A;  1EK8 A;  3ADA C;  3S2D K;  1TWG K;  3K7A C;  1JOE A;  4XCH A;  3GTJ C;  5FLM C;  3S1R C;  2O5I A;  5IP7 C;  5TMC A;  1ZVU A;  1VJE A;  2JA5 A;  3FHZ A;  2XCO A;  1FEU A;  3H3V L;  2GSO A;  4KMD A;  2R7Z K;  3WOD A;  4IO9 S;  5EGE A;  1DCP A;  1VLO A;  2W7V A;  3S17 K;  2BE5 A;  2NVX A;  4GZY A;  4YFK A;  1J6X A;  3G4A A;  1SFO A;  1WCM K;  2PMZ L;  2V6U A;  5D4D A;  3S2H C;  4P5A A;  5IYC K;  3HKZ D;  4M1X A;  4WFB S;  4BBS K;  1EI6 A;  5EGH A;  3GDZ A;  2WAQ D;  4BY1 C;  1YCL A;  5IYD C;  5IP9 C;  2B63 C;  4BLA A;  3S15 C;  4A3F C;  2P8T A;  3GTG A;  2XCR B;  3BP3 A;  3GSI A;  3K7A K;  3GTM A;  3GTJ K;  5FLM K;  3S1R K;  5IP7 K;  4BLB A;  3AH5 A;  3SZZ A;  2KWA A;  4KN7 A;  2A68 A;  2NVY C;  1O2F B;  4GTD A;  1BJT A;  4GTE A;  3S16 C;  1XZQ A;  2ZJR S;  1F9N A;  4C3J C;  1F7V A;  1Y1W C;  1USM A;  1O2A A;  2R92 C;  5C3E C;  2JA6 C;  4BKW A;  2JA8 K;  1RU0 A;  3A8I A;  1K83 C;  4AYB L;  2A69 A;  3GEH A;  3S2H K;  2R93 C;  2RGR A;  1C0A A;  4A3D C;  3HXA A;  4FM9 A;  2WB1 D;  3GTP A;  4BY1 K;  5HL8 A;  1R9T A;  5IYD K;  4LJZ A;  5IP9 K;  2B63 K;  4GFQ A;  1VH2 A;  3S15 K;  4A3F K;  1EH1 A;  3PIO S;  4WFN S;  1IBA A;  4KB2 A;  1I50 A;  4G7H A;  2NVQ C;  3CAG A;  3HOX C;  2E2H A;  4KDD A;  4KMH A;  1I3Q A;  4A3K C;  5IOQ A;  3N3Y A;  3CF5 S;  4A3M K;  4X6A C;  2PPB A;  3S16 K;  3TFJ A;  1BS2 A;  1UV7 A;  4C3J K;  3G4C A;  5JVG S;  2JA7 C;  1Y1W K;  2L5N A;  1WQF A;  3IPJ A;  2R92 K;  5C3E K;  4QIW D;  3GTK C;  1YNN A;  2GAH C;  3QX3 A;  4IOC S;  1TWA C;  1ZYR A;  2R93 K;  4A3D K;  4Q4Z A;  3HOY C;  4C2M C;  3HOU C;  4C3H C;  3T00 A;  2CW0 A;  4LOW A;  1EFW A;  5JVH S;  4YFN A;  5JVO A;  4KM8 A;  4WIL A;  1XXB A;  2NVQ K;  4JK1 A;  3NUH A;  2CFA A;  2P5M A;  4A3K K;  1XZP B;  1USO A;  2V6S A;  4X6A K;  3M3Y C;  3TFH A;  1O27 A;  2KPU A;  2JA7 K;  3GTO A;  3FKI K;  3GTK K;  3GTG C;  1DCO A;  2EBB A;  1TWA K;  4Y7N C;  3RZD C;  3GTM C;  2GSU A;  4A3L C;  4A3C C;  5M5W K;  3HOY K;  5C4J C;  5C4X K;  4RMF A;  1IL2 A;  3HOU K;  4OIR A;  1F93 A;  1TWH A;  3T02 A;  1L0W A;  4GTL A;  2XCQ A;  1O24 A;  1Y1V A;  2A6H A;  1VGX A;  3AD7 C;  4GTC A;  3PO3 C;  2PHC B;  4G7Z A;  1O25 A;  2VUM A;  4KC6 A;  3I4N C;  3AD9 C;  4P5B A;  3M3Y K;  3T01 A;  1B4A A;  1WOO A;  5E68 A;  1HI9 A;  2YU9 C;  1R9T C;  4KMU A;  2PA8 L;  3GTG K;  4U67 S;  4PAB A;  1I50 C;  4Y7N K;  3RZD K;  3GTM K;  4YG2 A;  3S1N C;  4A3C K;  4XSZ A;  3VA7 A;  5C4J K;  3DLL S;  5CHP A;  3S1Q C;  2ZUE A;  4Q5S A;  1XZQ B;  2Y0S D;  4YFX A;  4WCE S;  5HQH A;  4OIO A;  4A3B C;  2Y3P A;  5IOT A;  5M3M K;  3L4J A;  4ZH4 A;  3AQO A;  3PO3 K;  3I4N K;  1X31 C;  3HOW C;  4LK0 A;  3DXJ A;  1YNJ A;  3H0G C;  2YU9 K;  1G51 A;  1R9T K;  1WOP A;  3PO2 C;  2E2I A;  2B63 A;  3GTL A;  2NVY K;  1TWF A;  3H3V D;  3CQZ C;  1I50 K;  5IOR A;  3S0X A;  5M5X K;  5M5Y K;  4GTB A;  5L46 A;  1PJ5 A;  1B4B A;  3S1N K;  1TWC C;  1BDF A;  4QJV A;  3S1Q K;  2JH3 A;  4KAW X;  2JA6 K;  4Y52 C;  3AQP A;  2PMZ D;  3LPX A;  2GAG C;  1K83 K;  3RZO C;  1J6V A;  3HKZ L;  1O28 A;  2R92 A;  4G0W A;  2JA5 C;  2ZUF A;  5IYB C;  1XPP A;  3HOW K;  1HQM A;  3H0G K;  3A8J A;  3HOX K;  1JVI A;  3PO2 K;  1IS1 A;  4OIQ A;  3S14 C;  4A3I C;  2NVX C;  1TWH C;  2O5J A;  4NOI A;  1JQW A;  1SFO C;  3CQZ K;  1I6H C;  2FQT A;  1ZQ1 C;  1GE9 A;  1Y1V C;  2CFA B;  4GTF A;  4PAA A;  3LYW A;  1TWC K;  2V6T A;  3S17 C;  4LK1 A;  1F7U A;  2VUM C;  3GTQ A;  4GT9 A;  2A6E A;  4Y52 K;  1IQ0 A;  4AYB D;  4O2D A;  3RZO K;  1TWG A;  4KM9 A;  3GEI A;  2WB1 L;  3FKI A;  5TMF A;  3SZY A;  5DM6 S;  4ILD A;  2JA5 K;  4C2M K;  4C3H K;  4G0V A;  3JST A;  3I4M C;  5IYB K;  1SMY A;  5DM7 S;  1TWA A;  2R7Z A;  3EQL A;  2GSN A;  3GEE A;  4C45 A;  3ERE D;  1O2B A;  3S14 K;  1WSV A;  4A3I K;  1EQR A;  1TWH K;  2NVX K;  1J98 A;  3S1M C;  1SFO K;  1WCM A;  4XLN A;  3N0B A;  3TTG A;  1I6H K;  1BGW A;  3OEP A;  1Y1V K;  4BY7 C;  3GTP C;  2VUM K;  2JA8 C;  1IE0 A;  1XXA A;  4QIW L;  4FZB A;  2ZJP S;  4A3G C;  3AD8 C;  3BP8 C;  3OPF A;  3GTJ A;  4A3L K;  2E2H C;  4LR2 A;  4OIN A;  3ORE A;  1PJ7 A;  4KB4 A;  2E2I C;  1ISE A;  1I3Q C;  3GTL C;  5C44 C;  1TWF C;  3I4M K;  5TJ3 A;  3M4O C;  3TFI A;  4WJ4 A;  4KAR A;  2E2J C;  2ZJQ S;  1V5V A;  4KAT A;  2ZFZ A;  4A93 C;  3N0C A;  5CJ9 A;  4A3M C;  3S1M K;  3V4G A;  1DCH A;  4LLG A;  1IW7 A;  1KQ4 A;  1ZBS A;  4WJ3 M;  1DD5 A;  4BY7 K;  4A3J C;  4AH6 A;  3GTP K;  4C3I C;  1PJ6 A;  2RH6 A;  1WOR A;  1WIH A;  4OIP A;  3FOE A;  4A3G K;  5HL7 S;  3HOV C;  2KXY A;  4BBR C;  3FOF A;  1AB4 A;  3PIP S;  2YU9 A;  2E2H K;  1VRQ C;  4KMA A;  1WQG A;  2E2I K;  2FQO A;  2KQ1 A;  1I3Q K;  4KN4 A;  3GTL K;  2NVY A;  1ZXO A;  4KAS A;  5C44 K;  1TWF K;  3L4K A;  4QJV B;  3M4O K;  2NVT C;  4A3E C;  3BUE A;  4A3B K;  4BXX C;  3HOZ C;  3GTO C;  1Y1W A;  3GTQ C;  2E2J K;  1WSR A;  2WAQ L;  1INN A;  2JA6 A;  4A93 K;  4GTA A;  1K83 A;  3LAJ A;  3S2D C;  1TWG C;  4IOA S;  2L3U A;  2R93 A;  4DDQ A;  1I6V A;  1YX2 A;  3FKI C;  1O26 A;  4A3J K;  1WOS A;  3A8K A;  4C3I K;  4G7O A;  1O29 A;  3Q3Q A;  5M3F K;  5FJ8 K;  2PA8 D;  4XSX A;  4MEY A;  4J3N A;  2R7Z C;  3HOV K;  4BBR K;  5JFE A;  4WF9 S;  3GIR A;  3H0G A;  3LAP A;  1J6W A;  4P9S A;  5C4X C; 
#chains in the Genus database with same CATH homology
 4MQ9 A;  3S14 K;  4A3I K;  4A3K C;  4Q5S A;  1TWH K;  2NVX K;  3S1M C;  2Y0S D;  1WCM C;  1SFO K;  2Y0S L;  4YFX A;  4XLN A;  4X6A C;  4A3M K;  1I6H K;  2NVT K;  5IYC C;  2PPB A;  3S16 K;  4A3E K;  1Y1V K;  4A3B C;  4OIO A;  5M3M K;  4C3J K;  4BBS C;  4XLP A;  4BY7 C;  4BXX K;  4ZH4 A;  2JA7 C;  3GTP C;  1Y1W K;  3HOZ K;  3GTO K;  3PO3 K;  3GTQ K;  2R92 K;  2VUM K;  5C3E K;  2JA8 C;  3I4N K;  4QIW D;  3GTK C;  4MEX A;  4QIW L;  1YNN A;  4A3G C;  3S2D K;  3HOW C;  1TWG K;  1TWA C;  1ZYR A;  3K7A C;  4LK0 A;  2R93 K;  3DXJ A;  3GTJ C;  4A3D K;  1YNJ A;  5FLM C;  4Q4Z A;  3S1R C;  4A3L K;  2O5I A;  3H0G C;  5IP7 C;  5TMC A;  2E2H C;  4OIN A;  3HOY C;  1R9T K;  2YU9 K;  2E2I C;  3PO2 C;  4C2M C;  1I3Q C;  4C3H C;  3HOU C;  2CW0 A;  3GTL C;  5C44 C;  2NVY K;  1TWF C;  3I4M K;  3H3V D;  3CQZ C;  1I50 K;  5M5X K;  4YFN A;  3H3V L;  3M4O C;  2R7Z K;  5M5Y K;  3WOD A;  3S1N K;  2NVQ K;  5C4X K;  1TWC C;  1BDF A;  4QJV A;  4JK1 A;  3S1Q K;  3S17 K;  2E2J C;  2BE5 A;  4GZY A;  4YFK A;  4A3K K;  2JA6 K;  4Y52 C;  4A93 C;  2PMZ D;  4A3M C;  3S1M K;  1WCM K;  2PMZ L;  5D4D A;  1K83 K;  3M3Y C;  4LLG A;  1IW7 A;  3S2H C;  5IYC K;  3RZO C;  4X6A K;  3HKZ D;  4BBS K;  3HKZ L;  4BY7 K;  2JA7 K;  2WAQ D;  4A3J C;  4BY1 C;  3FKI K;  3GTP K;  4C3I C;  5IYD C;  2JA5 C;  5IP9 C;  2B63 C;  3GTK K;  4OIP A;  3S15 C;  4A3F C;  3GTG C;  4A3G K;  5IYB C;  1XPP A;  3HOW K;  1TWA K;  4Y7N C;  3K7A K;  3HOV C;  3RZD C;  3GTM C;  1HQM A;  4BBR C;  3GTJ K;  4A3L C;  4A3C C;  5FLM K;  3S1R K;  5M5W K;  3HOY K;  5C4X C;  3H0G K;  5IP7 K;  5C4J C;  3HOX K;  2E2H K;  4KN7 A;  2E2I K;  3PO2 K;  1I3Q K;  2A68 A;  4KN4 A;  4OIQ A;  2NVY C;  4OIR A;  3S14 C;  4A3I C;  2NVX C;  1TWH C;  2O5J A;  4NOI A;  1TWF K;  5C44 K;  3GTL K;  1SFO C;  3CQZ K;  1I6H C;  4QJV B;  3M4O K;  2NVT C;  3S16 C;  4A3E C;  1Y1V C;  2A6H A;  4C3J C;  1TWC K;  4A3B K;  4BXX C;  3S17 C;  4LK1 A;  1Y1W C;  3GTO C;  3HOZ C;  3PO3 C;  4G7Z A;  3GTQ C;  2R92 C;  2VUM C;  2WAQ L;  5C3E C;  2E2J K;  2JA6 C;  2A6E A;  3I4N C;  2JA8 K;  4A93 K;  4AYB D;  4Y52 K;  1K83 C;  4AYB L;  2A69 A;  3M3Y K;  3S2H K;  3S2D C;  3RZO K;  1TWG C;  2R93 C;  4A3D C;  1I6V A;  2WB1 D;  3FKI C;  2WB1 L;  2YU9 C;  4A3J K;  4BY1 K;  1R9T C;  5TMF A;  4KMU A;  4G7O A;  4C3I K;  5IYD K;  5M3F K;  4LJZ A;  5FJ8 K;  5IP9 K;  4C2M K;  2PA8 D;  4C3H K;  2JA5 K;  2B63 K;  2PA8 L;  4A3F K;  4XSX A;  3GTG K;  3I4M C;  3S15 K;  5IYB K;  1SMY A;  1I50 C;  4MEY A;  4G7H A;  2R7Z C;  4Y7N K;  3HOV K;  3RZD K;  3GTM K;  4BBR K;  3EQL A;  4YG2 A;  2NVQ C;  3S1N C;  3HOU K;  3HOX C;  4A3C K;  4XSZ A;  5C4J K;  3S1Q C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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