3E2KC

Crystal structure of the kpc-2 beta-lactamase/beta-lactamase inhibitor protein (blip)
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
165
structure length
160
Chain Sequence
AGVMTGAKFTQIQFGMTRQQVLDIAGAENCETGGSFGDSIHCRGHAAGDYYAYATFGFTSAAADAKVDSKSQEKLLAPSAPTLTLAKFNQVTVGMTRAQVLATVGQGSCTTWSEYYPAYPSTAGVTLSLSCFDVDGYSRGSAHLWFTDGVLQGKRQWDLV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
molecule keywords Carbapenemase
publication title Structural and biochemical characterization of the interaction between KPC-2 beta-lactamase and beta-lactamase inhibitor protein
pubmed doi rcsb
source organism Klebsiella pneumoniae
total genus 45
structure length 160
sequence length 165
chains with identical sequence D
ec nomenclature
pdb deposition date 2008-08-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF07467 BLIP Beta-lactamase inhibitor (BLIP)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1450.10 Alpha Beta 2-Layer Sandwich Beta-lactamase Inhibitory Protein; Chain:B, domain 1 Beta-lactamase Inhibitory Protein; Chain:B, domain 1 3e2kC01
3.30.1450.10 Alpha Beta 2-Layer Sandwich Beta-lactamase Inhibitory Protein; Chain:B, domain 1 Beta-lactamase Inhibitory Protein; Chain:B, domain 1 3e2kC02
1JTGB 2G2WB 3C7VB 3C4OB 2KXXA 3C4PB 3D4EA 3E2LC 2B5RC 4DM5A 1XXMC 5AYWE 5D0OE 2YH9A 3GMUB 3N4IB 5EKQE 1S0WC 3E2KC 2PXGA 2G2UB 2KM7A 5D0QE 3C7UB
chains in the Genus database with same CATH superfamily
1JTGB 2G2WB 3C7VB 3C4OB 2KXXA 3NWAA 3C4PB 3D4EA 3E2LC 2B5RC 4DM5A 1XXMC 5AYWE 5D0OE 4L1RA 3NWFA 2YH9A 3GMUB 3N4IB 3NW8A 5EKQE 3NWDA 1S0WC 3E2KC 2PXGA 3FVCA 2G2UB 2GUMA 2KM7A 5D0QE 3C7UB 4HSIA
chains in the Genus database with same CATH topology
1JTGB 2G2WB 3C7VB 3C4OB 2KXXA 3NWAA 3C4PB 3D4EA 3E2LC 2B5RC 4DM5A 1XXMC 5AYWE 5D0OE 4L1RA 3NWFA 2YH9A 3GMUB 3N4IB 3NW8A 5EKQE 3NWDA 1S0WC 3E2KC 2PXGA 3FVCA 2G2UB 2GUMA 2KM7A 5D0QE 3C7UB 4HSIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1JTG B;  2G2W B;  3C7V B;  3C4O B;  2KXX A;  3C4P B;  3D4E A;  3E2L C;  2B5R C;  4DM5 A;  1XXM C;  5AYW E;  5D0O E;  2YH9 A;  3GMU B;  3N4I B;  5EKQ E;  1S0W C;  3E2K C;  2PXG A;  2G2U B;  2KM7 A;  5D0Q E;  3C7U B; 
#chains in the Genus database with same CATH topology
 1JTG B;  2G2W B;  3C7V B;  3C4O B;  2KXX A;  3NWA A;  3C4P B;  3D4E A;  3E2L C;  2B5R C;  4DM5 A;  1XXM C;  5AYW E;  5D0O E;  4L1R A;  3NWF A;  2YH9 A;  3GMU B;  3N4I B;  3NW8 A;  5EKQ E;  3NWD A;  1S0W C;  3E2K C;  2PXG A;  3FVC A;  2G2U B;  2GUM A;  2KM7 A;  5D0Q E;  3C7U B;  4HSI A; 
#chains in the Genus database with same CATH homology
 1JTG B;  2G2W B;  3C7V B;  3C4O B;  2KXX A;  3NWA A;  3C4P B;  3D4E A;  3E2L C;  2B5R C;  4DM5 A;  1XXM C;  5AYW E;  5D0O E;  4L1R A;  3NWF A;  2YH9 A;  3GMU B;  3N4I B;  3NW8 A;  5EKQ E;  3NWD A;  1S0W C;  3E2K C;  2PXG A;  3FVC A;  2G2U B;  2GUM A;  2KM7 A;  5D0Q E;  3C7U B;  4HSI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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