3EP0A

Methyltransferase domain of human pr domain-containing protein 12
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
129
structure length
113
Chain Sequence
b'VQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPLMWEVFNEDGTVRYFIDASWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGN'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The crystal structure of methyltransferase domain of human PR Domain-containing protein 12.
rcsb
molecule keywords PR domain zinc finger protein 12
source organism Homo sapiens
molecule tags Transferase
total genus 26
structure length 113
sequence length 129
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-09-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 3ep0A00
1MT6A 5JHNA 3F9ZA 5TTFA 5JIYA 2BQZA 3F9YA 3CBOA 3IHXA 3M59A 5F5EA 3F9WA 5LSXA 3RAYA 3KMJA 3MO0A 4J7IA 4O6FA 4IJDA 3RIBA 5TEGA 4E47A 5T0MA 3RQ4A 5EX0A 3M58A 3S7FA 3MO2A 5CPRB 4YNMA 4AU7A 4NVQA 3M5AA 4WUYA 5KJMA 3N71A 1O9SA 3CBMA 5TH7A 1MUFA 5T0KA 3QWVA 4YNDA 5F6LA 4RZ0A 3RJWA 4JLGA 3DB5A 1XQHA 4LDGA 5KJLA 3OPEA 4YNPA 3TG4A 3S7DA 4QENA 4QEPA 1H3IA 3VUZA 3SWCA 4NJ5A 4Z4PA 4J8OA 3S7BA 3BO5A 5KJKA 3OOIA 4C1QA 1N3JA 3VV0A 4YPUA 2R3AA 3QWPA 5KJNA 1MVXA 3M56A 2QPWA 5HI7A 4JDSA 5LSZA 5CCLA 4MI0A 3MO5A 3EP0A 2IGQA 5HQ8A 2O8JA 3M53A 3F9XA 5EX3A 2RFIA 1N6AA 3M57A 3K5KA 3S7JA 3OXFA 5JJ0A 4O30A 5ARGA 3CBPA 3OS5A 4FMUA 5AYFA 3S8PA 4J83A 3M54A 4YPAA 4I51A 2W5ZA 5EG2A 3HNAA 1N6CA 3OXGA 4J7FA 5CCMA 1MVHA 3RU0A 2G46A 3QWWA 1ZKKA 5F59A 3KMTA 3DALA 1ML9A 4H12A 4IJ8A 4QEOA 1PEGA 4MI5A 3M55A 5F6KC 2JV0A 5ARFA 3OXLA 2F69A 4BUPA 3PDNA 5JINA 2W5YA 5T5GA 3SW9A 4YPEA 3TG5A 3FPDA 3MEKA 3KMAA
chains in the Genus database with same CATH superfamily
1MT6A 5JHNA 3F9ZA 5TTFA 5JIYA 2BQZA 3F9YA 3CBOA 3IHXA 3M59A 5F5EA 3F9WA 5LSXA 3RAYA 3KMJA 3MO0A 4J7IA 4O6FA 4IJDA 3RIBA 5TEGA 4E47A 5T0MA 3RQ4A 5EX0A 3M58A 3S7FA 3MO2A 5CPRB 4YNMA 4AU7A 4NVQA 3M5AA 4WUYA 5KJMA 3N71A 1O9SA 3CBMA 5TH7A 1MUFA 5T0KA 3QWVA 4YNDA 5F6LA 4RZ0A 3RJWA 4JLGA 3DB5A 1XQHA 4LDGA 5KJLA 3OPEA 4YNPA 3TG4A 3S7DA 4QENA 4QEPA 1H3IA 3VUZA 3SWCA 4NJ5A 4Z4PA 4J8OA 3S7BA 3BO5A 5KJKA 3OOIA 4C1QA 1N3JA 3VV0A 4YPUA 2R3AA 3QWPA 5KJNA 1MVXA 3M56A 2QPWA 5HI7A 4JDSA 5LSZA 5CCLA 4MI0A 3MO5A 3EP0A 2IGQA 5HQ8A 2O8JA 3M53A 3F9XA 5EX3A 2RFIA 1N6AA 3M57A 3K5KA 3S7JA 3OXFA 5JJ0A 4O30A 5ARGA 3CBPA 3OS5A 4FMUA 5AYFA 3S8PA 4J83A 3M54A 4YPAA 4I51A 2W5ZA 5EG2A 3HNAA 1N6CA 3OXGA 4J7FA 5CCMA 1MVHA 3RU0A 2G46A 3QWWA 1ZKKA 5F59A 3KMTA 3DALA 1ML9A 4H12A 4IJ8A 4QEOA 1PEGA 4MI5A 3M55A 5F6KC 2JV0A 5ARFA 3OXLA 2F69A 4BUPA 3PDNA 5JINA 2W5YA 5T5GA 3SW9A 4YPEA 3TG5A 3FPDA 3MEKA 3KMAA
chains in the Genus database with same CATH topology
1MT6A 5JHNA 3F9ZA 5TTFA 5JIYA 2BQZA 3F9YA 3CBOA 3IHXA 3M59A 5F5EA 3F9WA 5LSXA 3RAYA 3KMJA 3MO0A 4J7IA 4O6FA 4IJDA 3RIBA 5TEGA 4E47A 5T0MA 3RQ4A 5EX0A 3M58A 3S7FA 3MO2A 5CPRB 4YNMA 4AU7A 4NVQA 3M5AA 4WUYA 5KJMA 3N71A 1O9SA 3CBMA 5TH7A 1MUFA 5T0KA 3QWVA 4YNDA 5F6LA 4RZ0A 3RJWA 4JLGA 3DB5A 1XQHA 4LDGA 5KJLA 3OPEA 4YNPA 3TG4A 3S7DA 4QENA 4QEPA 1H3IA 3VUZA 3SWCA 4NJ5A 4Z4PA 4J8OA 3S7BA 3BO5A 5KJKA 3OOIA 4C1QA 1N3JA 3VV0A 4YPUA 2R3AA 3QWPA 5KJNA 1MVXA 3M56A 2QPWA 5HI7A 4JDSA 5LSZA 5CCLA 4MI0A 3MO5A 3EP0A 2IGQA 5HQ8A 2O8JA 3M53A 3F9XA 5EX3A 2RFIA 1N6AA 3M57A 3K5KA 3S7JA 3OXFA 5JJ0A 4O30A 5ARGA 3CBPA 3OS5A 4FMUA 5AYFA 3S8PA 4J83A 3M54A 4YPAA 4I51A 2W5ZA 5EG2A 3HNAA 1N6CA 3OXGA 4J7FA 5CCMA 1MVHA 3RU0A 2G46A 3QWWA 1ZKKA 5F59A 3KMTA 3DALA 1ML9A 4H12A 4IJ8A 4QEOA 1PEGA 4MI5A 3M55A 5F6KC 2JV0A 5ARFA 3OXLA 2F69A 4BUPA 3PDNA 5JINA 2W5YA 5T5GA 3SW9A 4YPEA 3TG5A 3FPDA 3MEKA 3KMAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MT6 A;  5JHN A;  3F9Z A;  5TTF A;  5JIY A;  2BQZ A;  3F9Y A;  3CBO A;  3IHX A;  3M59 A;  5F5E A;  3F9W A;  5LSX A;  3RAY A;  3KMJ A;  3MO0 A;  4J7I A;  4O6F A;  4IJD A;  3RIB A;  5TEG A;  4E47 A;  5T0M A;  3RQ4 A;  5EX0 A;  3M58 A;  3S7F A;  3MO2 A;  5CPR B;  4YNM A;  4AU7 A;  4NVQ A;  3M5A A;  4WUY A;  5KJM A;  3N71 A;  1O9S A;  3CBM A;  5TH7 A;  1MUF A;  5T0K A;  3QWV A;  4YND A;  5F6L A;  4RZ0 A;  3RJW A;  4JLG A;  3DB5 A;  1XQH A;  4LDG A;  5KJL A;  3OPE A;  4YNP A;  3TG4 A;  3S7D A;  4QEN A;  4QEP A;  1H3I A;  3VUZ A;  3SWC A;  4NJ5 A;  4Z4P A;  4J8O A;  3S7B A;  3BO5 A;  5KJK A;  3OOI A;  4C1Q A;  1N3J A;  3VV0 A;  4YPU A;  2R3A A;  3QWP A;  5KJN A;  1MVX A;  3M56 A;  2QPW A;  5HI7 A;  4JDS A;  5LSZ A;  5CCL A;  4MI0 A;  3MO5 A;  3EP0 A;  2IGQ A;  5HQ8 A;  2O8J A;  3M53 A;  3F9X A;  5EX3 A;  2RFI A;  1N6A A;  3M57 A;  3K5K A;  3S7J A;  3OXF A;  5JJ0 A;  4O30 A;  5ARG A;  3CBP A;  3OS5 A;  4FMU A;  5AYF A;  3S8P A;  4J83 A;  3M54 A;  4YPA A;  4I51 A;  2W5Z A;  5EG2 A;  3HNA A;  1N6C A;  3OXG A;  4J7F A;  5CCM A;  1MVH A;  3RU0 A;  2G46 A;  3QWW A;  1ZKK A;  5F59 A;  3KMT A;  3DAL A;  1ML9 A;  4H12 A;  4IJ8 A;  4QEO A;  1PEG A;  4MI5 A;  3M55 A;  5F6K C;  2JV0 A;  5ARF A;  3OXL A;  2F69 A;  4BUP A;  3PDN A;  5JIN A;  2W5Y A;  5T5G A;  3SW9 A;  4YPE A;  3TG5 A;  3FPD A;  3MEK A;  3KMA A; 
#chains in the Genus database with same CATH topology
 1MT6 A;  5JHN A;  3F9Z A;  5TTF A;  5JIY A;  2BQZ A;  3F9Y A;  3CBO A;  3IHX A;  3M59 A;  5F5E A;  3F9W A;  5LSX A;  3RAY A;  3KMJ A;  3MO0 A;  4J7I A;  4O6F A;  4IJD A;  3RIB A;  5TEG A;  4E47 A;  5T0M A;  3RQ4 A;  5EX0 A;  3M58 A;  3S7F A;  3MO2 A;  5CPR B;  4YNM A;  4AU7 A;  4NVQ A;  3M5A A;  4WUY A;  5KJM A;  3N71 A;  1O9S A;  3CBM A;  5TH7 A;  1MUF A;  5T0K A;  3QWV A;  4YND A;  5F6L A;  4RZ0 A;  3RJW A;  4JLG A;  3DB5 A;  1XQH A;  4LDG A;  5KJL A;  3OPE A;  4YNP A;  3TG4 A;  3S7D A;  4QEN A;  4QEP A;  1H3I A;  3VUZ A;  3SWC A;  4NJ5 A;  4Z4P A;  4J8O A;  3S7B A;  3BO5 A;  5KJK A;  3OOI A;  4C1Q A;  1N3J A;  3VV0 A;  4YPU A;  2R3A A;  3QWP A;  5KJN A;  1MVX A;  3M56 A;  2QPW A;  5HI7 A;  4JDS A;  5LSZ A;  5CCL A;  4MI0 A;  3MO5 A;  3EP0 A;  2IGQ A;  5HQ8 A;  2O8J A;  3M53 A;  3F9X A;  5EX3 A;  2RFI A;  1N6A A;  3M57 A;  3K5K A;  3S7J A;  3OXF A;  5JJ0 A;  4O30 A;  5ARG A;  3CBP A;  3OS5 A;  4FMU A;  5AYF A;  3S8P A;  4J83 A;  3M54 A;  4YPA A;  4I51 A;  2W5Z A;  5EG2 A;  3HNA A;  1N6C A;  3OXG A;  4J7F A;  5CCM A;  1MVH A;  3RU0 A;  2G46 A;  3QWW A;  1ZKK A;  5F59 A;  3KMT A;  3DAL A;  1ML9 A;  4H12 A;  4IJ8 A;  4QEO A;  1PEG A;  4MI5 A;  3M55 A;  5F6K C;  2JV0 A;  5ARF A;  3OXL A;  2F69 A;  4BUP A;  3PDN A;  5JIN A;  2W5Y A;  5T5G A;  3SW9 A;  4YPE A;  3TG5 A;  3FPD A;  3MEK A;  3KMA A; 
#chains in the Genus database with same CATH homology
 1MT6 A;  5JHN A;  3F9Z A;  5TTF A;  5JIY A;  2BQZ A;  3F9Y A;  3CBO A;  3IHX A;  3M59 A;  5F5E A;  3F9W A;  5LSX A;  3RAY A;  3KMJ A;  3MO0 A;  4J7I A;  4O6F A;  4IJD A;  3RIB A;  5TEG A;  4E47 A;  5T0M A;  3RQ4 A;  5EX0 A;  3M58 A;  3S7F A;  3MO2 A;  5CPR B;  4YNM A;  4AU7 A;  4NVQ A;  3M5A A;  4WUY A;  5KJM A;  3N71 A;  1O9S A;  3CBM A;  5TH7 A;  1MUF A;  5T0K A;  3QWV A;  4YND A;  5F6L A;  4RZ0 A;  3RJW A;  4JLG A;  3DB5 A;  1XQH A;  4LDG A;  5KJL A;  3OPE A;  4YNP A;  3TG4 A;  3S7D A;  4QEN A;  4QEP A;  1H3I A;  3VUZ A;  3SWC A;  4NJ5 A;  4Z4P A;  4J8O A;  3S7B A;  3BO5 A;  5KJK A;  3OOI A;  4C1Q A;  1N3J A;  3VV0 A;  4YPU A;  2R3A A;  3QWP A;  5KJN A;  1MVX A;  3M56 A;  2QPW A;  5HI7 A;  4JDS A;  5LSZ A;  5CCL A;  4MI0 A;  3MO5 A;  3EP0 A;  2IGQ A;  5HQ8 A;  2O8J A;  3M53 A;  3F9X A;  5EX3 A;  2RFI A;  1N6A A;  3M57 A;  3K5K A;  3S7J A;  3OXF A;  5JJ0 A;  4O30 A;  5ARG A;  3CBP A;  3OS5 A;  4FMU A;  5AYF A;  3S8P A;  4J83 A;  3M54 A;  4YPA A;  4I51 A;  2W5Z A;  5EG2 A;  3HNA A;  1N6C A;  3OXG A;  4J7F A;  5CCM A;  1MVH A;  3RU0 A;  2G46 A;  3QWW A;  1ZKK A;  5F59 A;  3KMT A;  3DAL A;  1ML9 A;  4H12 A;  4IJ8 A;  4QEO A;  1PEG A;  4MI5 A;  3M55 A;  5F6K C;  2JV0 A;  5ARF A;  3OXL A;  2F69 A;  4BUP A;  3PDN A;  5JIN A;  2W5Y A;  5T5G A;  3SW9 A;  4YPE A;  3TG5 A;  3FPD A;  3MEK A;  3KMA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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