3EP0A

Methyltransferase domain of human pr domain-containing protein 12
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
129
structure length
113
Chain Sequence
VQKLSSLVLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPLMWEVFNEDGTVRYFIDASWMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Homo sapiens
publication title The crystal structure of methyltransferase domain of human PR Domain-containing protein 12.
rcsb
molecule keywords PR domain zinc finger protein 12
total genus 26
structure length 113
sequence length 129
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-09-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.270.10 Mainly Beta Beta Complex Beta-clip-like SET domain 3ep0A00
4BUPA 3SWCA 3F9ZA 1ZKKA 4JDSA 4J7FA 5F59A 3MO0A 4YPEA 5CPRB 3M58A 3KMJA 3OXGA 4LDGA 5KJKA 5JHNA 4C1QA 3DALA 5LSZA 4QEPA 5T0MA 2BQZA 3S7FA 3M54A 5JJ0A 5ARFA 1N6AA 3RU0A 3S7BA 1N6CA 5KJLA 4IJ8A 1H3IA 5HI7A 3HNAA 4MI5A 3M53A 3S8PA 5KJNA 4YNDA 3SW9A 2RFIA 4YPAA 4YNPA 5TEGA 3DB5A 3M5AA 4AU7A 2G46A 3OXFA 1XQHA 3K5KA 5ARGA 1MUFA 5TH7A 3CBMA 3PDNA 5T5GA 4O30A 4FMUA 5JINA 5TTFA 4QENA 4H12A 1MT6A 4RZ0A 3RJWA 5CCLA 3RAYA 5KJMA 3M56A 4MI0A 4Z4PA 4O6FA 3TG5A 4J83A 2QPWA 5EX0A 2O8JA 5F5EA 3QWWA 3VV0A 3CBOA 2JV0A 3OOIA 2IGQA 3S7DA 2W5ZA 5T0KA 1MVXA 5LSXA 2R3AA 1ML9A 3TG4A 3F9YA 3F9WA 3QWPA 5JIYA 5F6KC 5EX3A 5F6LA 3M55A 3VUZA 3M59A 5AYFA 2F69A 3MO2A 1N3JA 4J8OA 3N71A 3IHXA 3KMAA 3BO5A 4YNMA 1O9SA 3OPEA 3M57A 3OS5A 3CBPA 1PEGA 3MO5A 3RIBA 2W5YA 4IJDA 4WUYA 4NVQA 3KMTA 4J7IA 5CCMA 3FPDA 4JLGA 4YPUA 3RQ4A 3EP0A 4QEOA 5HQ8A 3F9XA 4NJ5A 5EG2A 3S7JA 3MEKA 3OXLA 3QWVA 4E47A 1MVHA 4I51A
chains in the Genus database with same CATH superfamily
4BUPA 3SWCA 3F9ZA 1ZKKA 4JDSA 4J7FA 5F59A 3MO0A 4YPEA 5CPRB 3M58A 3KMJA 3OXGA 4LDGA 5KJKA 5JHNA 4C1QA 3DALA 5LSZA 4QEPA 5T0MA 2BQZA 3S7FA 3M54A 5JJ0A 5ARFA 1N6AA 3RU0A 3S7BA 1N6CA 5KJLA 4IJ8A 1H3IA 5HI7A 3HNAA 4MI5A 3M53A 3S8PA 5KJNA 4YNDA 3SW9A 2RFIA 4YPAA 4YNPA 5TEGA 3DB5A 3M5AA 4AU7A 2G46A 3OXFA 1XQHA 3K5KA 5ARGA 1MUFA 5TH7A 3CBMA 3PDNA 5T5GA 4O30A 4FMUA 5JINA 5TTFA 4QENA 4H12A 1MT6A 4RZ0A 3RJWA 5CCLA 3RAYA 5KJMA 3M56A 4MI0A 4Z4PA 4O6FA 3TG5A 4J83A 2QPWA 5EX0A 2O8JA 5F5EA 3QWWA 3VV0A 3CBOA 2JV0A 3OOIA 2IGQA 3S7DA 2W5ZA 5T0KA 1MVXA 5LSXA 2R3AA 1ML9A 3TG4A 3F9YA 3F9WA 3QWPA 5JIYA 5F6KC 5EX3A 5F6LA 3M55A 3VUZA 3M59A 5AYFA 2F69A 3MO2A 1N3JA 4J8OA 3N71A 3IHXA 3KMAA 3BO5A 4YNMA 1O9SA 3OPEA 3M57A 3OS5A 3CBPA 1PEGA 3MO5A 3RIBA 2W5YA 4IJDA 4WUYA 4NVQA 3KMTA 4J7IA 5CCMA 3FPDA 4JLGA 4YPUA 3RQ4A 3EP0A 4QEOA 5HQ8A 3F9XA 4NJ5A 5EG2A 3S7JA 3MEKA 3OXLA 3QWVA 4E47A 1MVHA 4I51A
chains in the Genus database with same CATH topology
4BUPA 3SWCA 3F9ZA 1ZKKA 4JDSA 4J7FA 5F59A 3MO0A 4YPEA 5CPRB 3M58A 3KMJA 3OXGA 4LDGA 5KJKA 5JHNA 4C1QA 3DALA 5LSZA 4QEPA 5T0MA 2BQZA 3S7FA 3M54A 5JJ0A 5ARFA 1N6AA 3RU0A 3S7BA 1N6CA 5KJLA 4IJ8A 1H3IA 5HI7A 3HNAA 4MI5A 3M53A 3S8PA 5KJNA 4YNDA 3SW9A 2RFIA 4YPAA 4YNPA 5TEGA 3DB5A 3M5AA 4AU7A 2G46A 3OXFA 1XQHA 3K5KA 5ARGA 1MUFA 5TH7A 3CBMA 3PDNA 5T5GA 4O30A 4FMUA 5JINA 5TTFA 4QENA 4H12A 1MT6A 4RZ0A 3RJWA 5CCLA 3RAYA 5KJMA 3M56A 4MI0A 4Z4PA 4O6FA 3TG5A 4J83A 2QPWA 5EX0A 2O8JA 5F5EA 3QWWA 3VV0A 3CBOA 2JV0A 3OOIA 2IGQA 3S7DA 2W5ZA 5T0KA 1MVXA 5LSXA 2R3AA 1ML9A 3TG4A 3F9YA 3F9WA 3QWPA 5JIYA 5F6KC 5EX3A 5F6LA 3M55A 3VUZA 3M59A 5AYFA 2F69A 3MO2A 1N3JA 4J8OA 3N71A 3IHXA 3KMAA 3BO5A 4YNMA 1O9SA 3OPEA 3M57A 3OS5A 3CBPA 1PEGA 3MO5A 3RIBA 2W5YA 4IJDA 4WUYA 4NVQA 3KMTA 4J7IA 5CCMA 3FPDA 4JLGA 4YPUA 3RQ4A 3EP0A 4QEOA 5HQ8A 3F9XA 4NJ5A 5EG2A 3S7JA 3MEKA 3OXLA 3QWVA 4E47A 1MVHA 4I51A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BUP A;  3SWC A;  3F9Z A;  1ZKK A;  4JDS A;  4J7F A;  5F59 A;  3MO0 A;  4YPE A;  5CPR B;  3M58 A;  3KMJ A;  3OXG A;  4LDG A;  5KJK A;  5JHN A;  4C1Q A;  3DAL A;  5LSZ A;  4QEP A;  5T0M A;  2BQZ A;  3S7F A;  3M54 A;  5JJ0 A;  5ARF A;  1N6A A;  3RU0 A;  3S7B A;  1N6C A;  5KJL A;  4IJ8 A;  1H3I A;  5HI7 A;  3HNA A;  4MI5 A;  3M53 A;  3S8P A;  5KJN A;  4YND A;  3SW9 A;  2RFI A;  4YPA A;  4YNP A;  5TEG A;  3DB5 A;  3M5A A;  4AU7 A;  2G46 A;  3OXF A;  1XQH A;  3K5K A;  5ARG A;  1MUF A;  5TH7 A;  3CBM A;  3PDN A;  5T5G A;  4O30 A;  4FMU A;  5JIN A;  5TTF A;  4QEN A;  4H12 A;  1MT6 A;  4RZ0 A;  3RJW A;  5CCL A;  3RAY A;  5KJM A;  3M56 A;  4MI0 A;  4Z4P A;  4O6F A;  3TG5 A;  4J83 A;  2QPW A;  5EX0 A;  2O8J A;  5F5E A;  3QWW A;  3VV0 A;  3CBO A;  2JV0 A;  3OOI A;  2IGQ A;  3S7D A;  2W5Z A;  5T0K A;  1MVX A;  5LSX A;  2R3A A;  1ML9 A;  3TG4 A;  3F9Y A;  3F9W A;  3QWP A;  5JIY A;  5F6K C;  5EX3 A;  5F6L A;  3M55 A;  3VUZ A;  3M59 A;  5AYF A;  2F69 A;  3MO2 A;  1N3J A;  4J8O A;  3N71 A;  3IHX A;  3KMA A;  3BO5 A;  4YNM A;  1O9S A;  3OPE A;  3M57 A;  3OS5 A;  3CBP A;  1PEG A;  3MO5 A;  3RIB A;  2W5Y A;  4IJD A;  4WUY A;  4NVQ A;  3KMT A;  4J7I A;  5CCM A;  3FPD A;  4JLG A;  4YPU A;  3RQ4 A;  3EP0 A;  4QEO A;  5HQ8 A;  3F9X A;  4NJ5 A;  5EG2 A;  3S7J A;  3MEK A;  3OXL A;  3QWV A;  4E47 A;  1MVH A;  4I51 A; 
#chains in the Genus database with same CATH topology
 4BUP A;  3SWC A;  3F9Z A;  1ZKK A;  4JDS A;  4J7F A;  5F59 A;  3MO0 A;  4YPE A;  5CPR B;  3M58 A;  3KMJ A;  3OXG A;  4LDG A;  5KJK A;  5JHN A;  4C1Q A;  3DAL A;  5LSZ A;  4QEP A;  5T0M A;  2BQZ A;  3S7F A;  3M54 A;  5JJ0 A;  5ARF A;  1N6A A;  3RU0 A;  3S7B A;  1N6C A;  5KJL A;  4IJ8 A;  1H3I A;  5HI7 A;  3HNA A;  4MI5 A;  3M53 A;  3S8P A;  5KJN A;  4YND A;  3SW9 A;  2RFI A;  4YPA A;  4YNP A;  5TEG A;  3DB5 A;  3M5A A;  4AU7 A;  2G46 A;  3OXF A;  1XQH A;  3K5K A;  5ARG A;  1MUF A;  5TH7 A;  3CBM A;  3PDN A;  5T5G A;  4O30 A;  4FMU A;  5JIN A;  5TTF A;  4QEN A;  4H12 A;  1MT6 A;  4RZ0 A;  3RJW A;  5CCL A;  3RAY A;  5KJM A;  3M56 A;  4MI0 A;  4Z4P A;  4O6F A;  3TG5 A;  4J83 A;  2QPW A;  5EX0 A;  2O8J A;  5F5E A;  3QWW A;  3VV0 A;  3CBO A;  2JV0 A;  3OOI A;  2IGQ A;  3S7D A;  2W5Z A;  5T0K A;  1MVX A;  5LSX A;  2R3A A;  1ML9 A;  3TG4 A;  3F9Y A;  3F9W A;  3QWP A;  5JIY A;  5F6K C;  5EX3 A;  5F6L A;  3M55 A;  3VUZ A;  3M59 A;  5AYF A;  2F69 A;  3MO2 A;  1N3J A;  4J8O A;  3N71 A;  3IHX A;  3KMA A;  3BO5 A;  4YNM A;  1O9S A;  3OPE A;  3M57 A;  3OS5 A;  3CBP A;  1PEG A;  3MO5 A;  3RIB A;  2W5Y A;  4IJD A;  4WUY A;  4NVQ A;  3KMT A;  4J7I A;  5CCM A;  3FPD A;  4JLG A;  4YPU A;  3RQ4 A;  3EP0 A;  4QEO A;  5HQ8 A;  3F9X A;  4NJ5 A;  5EG2 A;  3S7J A;  3MEK A;  3OXL A;  3QWV A;  4E47 A;  1MVH A;  4I51 A; 
#chains in the Genus database with same CATH homology
 4BUP A;  3SWC A;  3F9Z A;  1ZKK A;  4JDS A;  4J7F A;  5F59 A;  3MO0 A;  4YPE A;  5CPR B;  3M58 A;  3KMJ A;  3OXG A;  4LDG A;  5KJK A;  5JHN A;  4C1Q A;  3DAL A;  5LSZ A;  4QEP A;  5T0M A;  2BQZ A;  3S7F A;  3M54 A;  5JJ0 A;  5ARF A;  1N6A A;  3RU0 A;  3S7B A;  1N6C A;  5KJL A;  4IJ8 A;  1H3I A;  5HI7 A;  3HNA A;  4MI5 A;  3M53 A;  3S8P A;  5KJN A;  4YND A;  3SW9 A;  2RFI A;  4YPA A;  4YNP A;  5TEG A;  3DB5 A;  3M5A A;  4AU7 A;  2G46 A;  3OXF A;  1XQH A;  3K5K A;  5ARG A;  1MUF A;  5TH7 A;  3CBM A;  3PDN A;  5T5G A;  4O30 A;  4FMU A;  5JIN A;  5TTF A;  4QEN A;  4H12 A;  1MT6 A;  4RZ0 A;  3RJW A;  5CCL A;  3RAY A;  5KJM A;  3M56 A;  4MI0 A;  4Z4P A;  4O6F A;  3TG5 A;  4J83 A;  2QPW A;  5EX0 A;  2O8J A;  5F5E A;  3QWW A;  3VV0 A;  3CBO A;  2JV0 A;  3OOI A;  2IGQ A;  3S7D A;  2W5Z A;  5T0K A;  1MVX A;  5LSX A;  2R3A A;  1ML9 A;  3TG4 A;  3F9Y A;  3F9W A;  3QWP A;  5JIY A;  5F6K C;  5EX3 A;  5F6L A;  3M55 A;  3VUZ A;  3M59 A;  5AYF A;  2F69 A;  3MO2 A;  1N3J A;  4J8O A;  3N71 A;  3IHX A;  3KMA A;  3BO5 A;  4YNM A;  1O9S A;  3OPE A;  3M57 A;  3OS5 A;  3CBP A;  1PEG A;  3MO5 A;  3RIB A;  2W5Y A;  4IJD A;  4WUY A;  4NVQ A;  3KMT A;  4J7I A;  5CCM A;  3FPD A;  4JLG A;  4YPU A;  3RQ4 A;  3EP0 A;  4QEO A;  5HQ8 A;  3F9X A;  4NJ5 A;  5EG2 A;  3S7J A;  3MEK A;  3OXL A;  3QWV A;  4E47 A;  1MVH A;  4I51 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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