3EWQA

Hcov-229e nsp3 adrp domain
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
167
structure length
167
Chain Sequence
KEKLNAFLVHDNVAFYQGDVDTVVNGVDFDFIVNAANENLAHGGGLAKALDVYTKGKLQRLSKEHIGLAGKVKVGTGVMVECDSLRIFNVVGPRKGKHERDLLIKAYNTINNEQGTPLTPILSCGIFGIKLETSLEVLLDVCNTKEVKVFVYTDTEVCKVKDFVSGL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Human coronavirus 229e
publication title Crystal structures of two coronavirus ADP-ribose-1''-monophosphatases and their complexes with ADP-Ribose: a systematic structural analysis of the viral ADRP domain.
pubmed doi rcsb
molecule keywords Non-structural protein 3
total genus 47
structure length 167
sequence length 167
ec nomenclature ec 3.4.19.12: Ubiquitinyl hydrolase 1.
pdb deposition date 2008-10-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01661 Macro Macro domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.220.10 Alpha Beta 3-Layer(aba) Sandwich Leucine Aminopeptidase, subunit E; domain 1 Leucine Aminopeptidase, subunit E, domain 1 3ewqA00
3EJGA 3EKEA 3EWQA 2ACFA 3EWRA 1YD9A 1ZR5A 3V2BA 5FSXA 3Q71A 2AFCA 3GQOA 4JCAA 4KSIA 3IIFA 2LGRA 4J5SA 2X47A 1TY8A 5E3BA 3IJ3A 2BFRA 3SIIA 5CMSA 4ZYQA 3KZWA 3GPQA 4ZY2A 5CB5A 4ZI6A 5FSUA 4ABKA 4J4ZA 3SIJA 3KR4A 1LANA 3KR5A 3H8EA 5DUSA 1VHUA 3IIDA 1TXZA 3EWPA 4IQYA 3JRUA 2BFQA 4K3NA 3GQEA 2VRIA 2L8RA 3GPGA 2XD7A 4D86A 1LAPA 4TU0A 3ETIA 4ETKA 1GYTA 5FSYA 2EEEA 4JGKA 3EWOA 4J5RA 4K0CA 4GVVA 3V45A 5HOLA 4ZY0A 5AILA 3JZTA 1HJZA 2FG1A 2DX6A 3T8WA 3PEIA 5D8NA 4R7MA 5CBMA 4KYBA 3Q6ZA 3SIHA 4UMLA 5FSZA 4ZX8A 1BLLE 4ABLA 2FAVA 4ZX9A 3VFQA 1LAMA 1BPMA 4GVWA 3SIGA 4JVVA 2J9AA 2FXKA 5CB3A 1NJRA 3H8FA 4J5QA 4ZY1A 4GUAA 5FSVA 4X2TA 1BPNA 3EJFA 3KQZA 1LCPA 4ETJA 3GPOA 1ZR3A 3EW5A 4JLLA 4ESSA 4R6TA 3H8GA 2EWBA 5HIHA 1SPVA 4R76A 3KQXA
chains in the Genus database with same CATH superfamily
2WCTA 3EJGA 3EKEA 3EWQA 2W2GA 2ACFA 2KQVA 3EWRA 1YD9A 1ZR5A 3V2BA 5FSXA 3Q71A 2AFCA 3GQOA 4JCAA 4KSIA 3IIFA 2LGRA 4J5SA 2X47A 2JZFA 1TY8A 5E3BA 3IJ3A 2BFRA 3SIIA 5CMSA 4ZYQA 3KZWA 3GPQA 4ZY2A 5CB5A 4ZI6A 5FSUA 4ABKA 4J4ZA 3SIJA 3KR4A 1LANA 3KR5A 2RNKA 3H8EA 5DUSA 1VHUA 3IIDA 1TXZA 3EWPA 4IQYA 3JRUA 2BFQA 4K3NA 3GQEA 2VRIA 2L8RA 3GPGA 2XD7A 4D86A 1LAPA 4TU0A 2JZDA 3ETIA 4ETKA 1GYTA 5FSYA 2EEEA 2JZEA 4JGKA 3EWOA 4J5RA 4K0CA 4GVVA 3V45A 5HOLA 4ZY0A 5AILA 3JZTA 1HJZA 2FG1A 2DX6A 3T8WA 3PEIA 5D8NA 4R7MA 5CBMA 4KYBA 3Q6ZA 3SIHA 4UMLA 5FSZA 4ZX8A 1BLLE 4ABLA 2FAVA 4ZX9A 3VFQA 1LAMA 1BPMA 4GVWA 3SIGA 4JVVA 2J9AA 2FXKA 5CB3A 1NJRA 3H8FA 4J5QA 4ZY1A 4GUAA 5FSVA 4X2TA 1BPNA 3EJFA 3KQZA 1LCPA 4ETJA 3GPOA 1ZR3A 3EW5A 4JLLA 4ESSA 4R6TA 3H8GA 2EWBA 5HIHA 1SPVA 4R76A 3KQXA
chains in the Genus database with same CATH topology
3EJGA 3EKEA 3EWQA 2ACFA 3EWRA 1YD9A 1ZR5A 3V2BA 5FSXA 3Q71A 2AFCA 3GQOA 4JCAA 4KSIA 3IIFA 2LGRA 4J5SA 2X47A 1TY8A 5E3BA 3IJ3A 2BFRA 3SIIA 5CMSA 4ZYQA 3KZWA 3GPQA 4ZY2A 5CB5A 4ZI6A 5FSUA 4ABKA 4J4ZA 3SIJA 3KR4A 1LANA 3KR5A 3H8EA 5DUSA 1VHUA 3IIDA 1TXZA 3EWPA 4IQYA 3JRUA 2BFQA 4K3NA 3GQEA 2VRIA 2L8RA 3GPGA 2XD7A 4D86A 1LAPA 4TU0A 3ETIA 4ETKA 1GYTA 5FSYA 2EEEA 4JGKA 3EWOA 4J5RA 4K0CA 4GVVA 3V45A 5HOLA 4ZY0A 5AILA 3JZTA 1HJZA 2FG1A 2DX6A 3T8WA 3PEIA 5D8NA 4R7MA 5CBMA 4KYBA 3Q6ZA 3SIHA 4UMLA 5FSZA 4ZX8A 1BLLE 4ABLA 2FAVA 4ZX9A 3VFQA 1LAMA 1BPMA 4GVWA 3SIGA 4JVVA 2J9AA 2FXKA 5CB3A 1NJRA 3H8FA 4J5QA 4ZY1A 4GUAA 5FSVA 4X2TA 1BPNA 3EJFA 3KQZA 1LCPA 4ETJA 3GPOA 1ZR3A 3EW5A 4JLLA 4ESSA 4R6TA 3H8GA 2EWBA 5HIHA 1SPVA 4R76A 3KQXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EJG A;  3EKE A;  3EWQ A;  2ACF A;  3EWR A;  1YD9 A;  1ZR5 A;  3V2B A;  5FSX A;  3Q71 A;  2AFC A;  3GQO A;  4JCA A;  4KSI A;  3IIF A;  2LGR A;  4J5S A;  2X47 A;  1TY8 A;  5E3B A;  3IJ3 A;  2BFR A;  3SII A;  5CMS A;  4ZYQ A;  3KZW A;  3GPQ A;  4ZY2 A;  5CB5 A;  4ZI6 A;  5FSU A;  4ABK A;  4J4Z A;  3SIJ A;  3KR4 A;  1LAN A;  3KR5 A;  3H8E A;  5DUS A;  1VHU A;  3IID A;  1TXZ A;  3EWP A;  4IQY A;  3JRU A;  2BFQ A;  4K3N A;  3GQE A;  2VRI A;  2L8R A;  3GPG A;  2XD7 A;  4D86 A;  1LAP A;  4TU0 A;  3ETI A;  4ETK A;  1GYT A;  5FSY A;  2EEE A;  4JGK A;  3EWO A;  4J5R A;  4K0C A;  4GVV A;  3V45 A;  5HOL A;  4ZY0 A;  5AIL A;  3JZT A;  1HJZ A;  2FG1 A;  2DX6 A;  3T8W A;  3PEI A;  5D8N A;  4R7M A;  5CBM A;  4KYB A;  3Q6Z A;  3SIH A;  4UML A;  5FSZ A;  4ZX8 A;  1BLL E;  4ABL A;  2FAV A;  4ZX9 A;  3VFQ A;  1LAM A;  1BPM A;  4GVW A;  3SIG A;  4JVV A;  2J9A A;  2FXK A;  5CB3 A;  1NJR A;  3H8F A;  4J5Q A;  4ZY1 A;  4GUA A;  5FSV A;  4X2T A;  1BPN A;  3EJF A;  3KQZ A;  1LCP A;  4ETJ A;  3GPO A;  1ZR3 A;  3EW5 A;  4JLL A;  4ESS A;  4R6T A;  3H8G A;  2EWB A;  5HIH A;  1SPV A;  4R76 A;  3KQX A; 
#chains in the Genus database with same CATH topology
 2WCT A;  3EJG A;  3EKE A;  3EWQ A;  2W2G A;  2ACF A;  2KQV A;  3EWR A;  1YD9 A;  1ZR5 A;  3V2B A;  5FSX A;  3Q71 A;  2AFC A;  3GQO A;  4JCA A;  4KSI A;  3IIF A;  2LGR A;  4J5S A;  2X47 A;  2JZF A;  1TY8 A;  5E3B A;  3IJ3 A;  2BFR A;  3SII A;  5CMS A;  4ZYQ A;  3KZW A;  3GPQ A;  4ZY2 A;  5CB5 A;  4ZI6 A;  5FSU A;  4ABK A;  4J4Z A;  3SIJ A;  3KR4 A;  1LAN A;  3KR5 A;  2RNK A;  3H8E A;  5DUS A;  1VHU A;  3IID A;  1TXZ A;  3EWP A;  4IQY A;  3JRU A;  2BFQ A;  4K3N A;  3GQE A;  2VRI A;  2L8R A;  3GPG A;  2XD7 A;  4D86 A;  1LAP A;  4TU0 A;  2JZD A;  3ETI A;  4ETK A;  1GYT A;  5FSY A;  2EEE A;  2JZE A;  4JGK A;  3EWO A;  4J5R A;  4K0C A;  4GVV A;  3V45 A;  5HOL A;  4ZY0 A;  5AIL A;  3JZT A;  1HJZ A;  2FG1 A;  2DX6 A;  3T8W A;  3PEI A;  5D8N A;  4R7M A;  5CBM A;  4KYB A;  3Q6Z A;  3SIH A;  4UML A;  5FSZ A;  4ZX8 A;  1BLL E;  4ABL A;  2FAV A;  4ZX9 A;  3VFQ A;  1LAM A;  1BPM A;  4GVW A;  3SIG A;  4JVV A;  2J9A A;  2FXK A;  5CB3 A;  1NJR A;  3H8F A;  4J5Q A;  4ZY1 A;  4GUA A;  5FSV A;  4X2T A;  1BPN A;  3EJF A;  3KQZ A;  1LCP A;  4ETJ A;  3GPO A;  1ZR3 A;  3EW5 A;  4JLL A;  4ESS A;  4R6T A;  3H8G A;  2EWB A;  5HIH A;  1SPV A;  4R76 A;  3KQX A; 
#chains in the Genus database with same CATH homology
 3EJG A;  3EKE A;  3EWQ A;  2ACF A;  3EWR A;  1YD9 A;  1ZR5 A;  3V2B A;  5FSX A;  3Q71 A;  2AFC A;  3GQO A;  4JCA A;  4KSI A;  3IIF A;  2LGR A;  4J5S A;  2X47 A;  1TY8 A;  5E3B A;  3IJ3 A;  2BFR A;  3SII A;  5CMS A;  4ZYQ A;  3KZW A;  3GPQ A;  4ZY2 A;  5CB5 A;  4ZI6 A;  5FSU A;  4ABK A;  4J4Z A;  3SIJ A;  3KR4 A;  1LAN A;  3KR5 A;  3H8E A;  5DUS A;  1VHU A;  3IID A;  1TXZ A;  3EWP A;  4IQY A;  3JRU A;  2BFQ A;  4K3N A;  3GQE A;  2VRI A;  2L8R A;  3GPG A;  2XD7 A;  4D86 A;  1LAP A;  4TU0 A;  3ETI A;  4ETK A;  1GYT A;  5FSY A;  2EEE A;  4JGK A;  3EWO A;  4J5R A;  4K0C A;  4GVV A;  3V45 A;  5HOL A;  4ZY0 A;  5AIL A;  3JZT A;  1HJZ A;  2FG1 A;  2DX6 A;  3T8W A;  3PEI A;  5D8N A;  4R7M A;  5CBM A;  4KYB A;  3Q6Z A;  3SIH A;  4UML A;  5FSZ A;  4ZX8 A;  1BLL E;  4ABL A;  2FAV A;  4ZX9 A;  3VFQ A;  1LAM A;  1BPM A;  4GVW A;  3SIG A;  4JVV A;  2J9A A;  2FXK A;  5CB3 A;  1NJR A;  3H8F A;  4J5Q A;  4ZY1 A;  4GUA A;  5FSV A;  4X2T A;  1BPN A;  3EJF A;  3KQZ A;  1LCP A;  4ETJ A;  3GPO A;  1ZR3 A;  3EW5 A;  4JLL A;  4ESS A;  4R6T A;  3H8G A;  2EWB A;  5HIH A;  1SPV A;  4R76 A;  3KQX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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