3FCJA

Nitroalkane oxidase: mutant402n crystallized with nitroethane
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
431
structure length
431
Chain Sequence
VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFNGGNIGLRRRQMQRVMALEDYEPWAATYGSS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Nitroalkane oxidase
publication title Differential quantum tunneling contributions in nitroalkane oxidase catalyzed and the uncatalyzed proton transfer reaction.
pubmed doi rcsb
source organism Fusarium oxysporum
molecule tags Oxidoreductase
total genus 159
structure length 431
sequence length 431
chains with identical sequence B, C, D
ec nomenclature ec 1.7.3.1: Nitroalkane oxidase.
pdb deposition date 2008-11-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 3fcjA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3fcjA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 3fcjA02
4X28C 3MMOA 3X0XA 2RF7A 3OWAA 3D6BA 2VIGA 3EONA 4NXLA 1JQIA 3D9EA 3F29A 4KCFA 3OIBA 2YYKA 2REHA 4IV6A 4L38A 2PG0A 3BNJA 3P4TA 4Q1OA 2JBTA 4L1FA 2YYMA 3BNHA 3D9GA 4G5EA 3GQTA 4HR3A 1UKWA 3MPJA 3SXQA 1UDYA 2R0NA 4W9UA 3LG1A 4Q17A 4KTOA 4L3ZA 1EGEA 2EBAA 2E80A 2WBIA 3S7WA 3FCJA 3II9A 4WJYA 2A1TA 2FONA 2ZO5A 3D1IA 2C12A 4Q5CA 2C0UA 5K3HA 4X28A 1WS9A 3B96A 4U83A 3R7KA 3SWOA 2YYGA 1IS2A 2UXWA 3GNCA 4OO2A 2YYIA 4L3XA 3MDEA 2YYLA 1T9GA 2YYJA 3MDDA 4RM7A 3BNFA 1U8VA 3D9FA 1SIQA 3HWCA 2Z1QA 1OAHA 4ZYJA 1SIRA 3SCEA 1BUCA 3PFDA 1FS9A 1FS8A 1EGDA 2JIFA 4DOYA 2J7AA 3SF6A 3MKHA 1EGCA 1RX0A 4O5MA 5K3JA 2DVLA 2CX9A 4P13A 2E81A 3UU9A 4Q4UA 2RDZA 2JBSA 3LGQA 1FS7A 4L3YA 4N5FA 4IRNA 3OWMA 2RFQA 2DDHA 3X0YA 3BNGA 3TTBA 1R2JA 5K3GA 3RKHA 2OT4A 3GM6A 3TORA 2ZAFA 4M9AA 4ZXVA 3MXLA 3MPIA 3D9DA 2JBRA 1W07A 3L1TA 3FO3A 3UBRA 2D29A 4Q5BA 5K3IA 3NF4A 1GU6A 4JEKA 2R0MA 1QDBA 2IX5A 3AFFA 4XVXA 2IX6A 2VR0A 1IVHA 3AFEA 3EOMA 2OR0A 4Q0TA 3M9VA
chains in the Genus database with same CATH superfamily
4X28C 5BRMA 2HJNA 3C2PA 3MMOA 3X0XA 2BU5A 2XS1A 2RF7A 1XFUA 3OWAA 4FF1A 2XQRB 3D6BA 2VIGA 3EONA 4NXLA 1K90A 2R03A 3VKHA 1JQIA 3D9EA 1RJ4A 3F29A 1JM6A 4KCFA 3OIBA 2YYKA 2REHA 4IV6A 1RJ1A 2YGWA 4L38A 2PG0A 4V26A 3BNJA 2Q8GA 3P4TA 2CJ6A 4Q1OA 5J6AA 2JBTA 4L1FA 4MPCA 1GKXA 5EZ3A 2YYMA 4MPEA 2PO4A 3BNHA 4JIZA 3D9GA 4G5EA 3GQTA 4HR3A 3CE2A 1XG2B 3N0RA 4E00A 1UKWA 3MPJA 2CJ8A 2CJ7A 1UDYA 1XFWA 4LQQB 2R0NA 3SXQA 3Q22A 1SK6A 4FF4A 4W9UA 1PI1A 3LG1A 4Q17A 4KTOA 4L3ZA 1EGEA 2EBAA 2E80A 2WBIA 3S7WA 1K8TA 1RP3A 3FCJA 3II9A 2OEXA 2A1TA 4H7QA 4JIOA 4WJYA 3Q0AA 2FONA 2ZKJA 2ZO5A 3D1IA 2C12A 1X91A 4Q5CA 2OEVA 1Y8NA 3U33A 2C0UA 5K3HA 4P79A 4X28A 1XFZA 1PK0A 3TZ0A 1WS9A 3B96A 4U83A 3R7KA 2R02A 3SWOA 5M4NA 3VKGA 4AKIA 2YYGA 3TZ5A 5M4KA 1IS2A 2UXWA 3GNCA 4OO2A 2YYIA 4MPNA 3TZ2A 3C46A 2CJ4A 1X8ZA 3KMLA 4L3XA 1GJVA 3MDEA 2YYLA 1Y0VA 1T9GA 4J1VA 2YYJA 3MDDA 4RM7A 3BNFA 1S26A 3D9FA 1U8VA 1SIQA 2BU8A 1XFYA 3HWCA 4KSFA 4G97A 5J71A 4HKRA 2Z1QA 2CJ5A 4AKGA 2AZEA 1OAHA 5GJVE 4ZYJA 3CRKA 1SIRA 1LVCA 2FP1A 3SCEA 3VADA 1BUCA 3PFDA 1XFXA 4FF3A 1FS9A 2F6LA 1FS8A 4H85A 4E01A 1EGDA 2JIFA 4DOYA 2J7AA 5GJWE 3SF6A 3MKHA 1EGCA 1RX0A 4O5MA 5K3JA 2FP2A 1Y8OA 1X90A 2R05A 2ZDYA 1R3BA 2DVLA 2CX9A 4P13A 1GKZA 2E81A 4MP7A 3UU9A 4Q4UA 2RDZA 2JBSA 2BU6A 3LGQA 1FS7A 2Q8HA 3DJLA 4V25A 3TZ4A 4L3YA 2OJQA 5BRKA 4KSAA 4LQSB 4N5FA 4IRNA 3OWMA 2RFQA 5B5WA 4F0XA 2E0AA 3D2RA 1XFVA 2DDHA 3X0YA 2EBHX 3X29A 4HKSA 3BNGA 4MP2A 4AKHA 1Y8PA 2BU2A 2LFWA 1SC5A 1R2JA 5K3GA 3TTBA 3RKHA 2OT4A 3Q23A 4H81A 2AO2A 3GM6A 3TORA 2ZAFA 4M9AA 4ZXVA 2XS8A 3MXLA 3MPIA 3D9DA 2JBRA 2GBBA 1W07A 3L1TA 3FO3A 3Q24A 3CRLA 5B5VA 2D29A 2VF1A 1K93A 4Q5BA 3UBRA 2Q8IA 5K3IA 5B6BA 5M4PA 3NF4A 1GU6A 2BU7A 4JEKA 4FF2A 4AI6A 2R0MA 1QDBA 2QR4A 2IX5A 3AFFA 2BTZA 2ZDXA 4XVXA 4QICA 2Q8FA 3C3LA 2IX6A 4KS9A 2VR0A 1IVHA 5M4MA 2EBFX 3AFEA 3EOMA 2OR0A 4DZYA 2PNRA 4Q0TA 4E02A 2EC5A 3M9VA 4FZ4A
chains in the Genus database with same CATH topology
4X28C 3MMOA 3X0XA 2RF7A 3OWAA 3D6BA 2VIGA 3EONA 4NXLA 1JQIA 3D9EA 3F29A 4KCFA 3OIBA 2YYKA 2REHA 4IV6A 4L38A 2PG0A 3BNJA 3P4TA 4Q1OA 2JBTA 4L1FA 2YYMA 3BNHA 3D9GA 4G5EA 3GQTA 4HR3A 1UKWA 3MPJA 3SXQA 1UDYA 2R0NA 4W9UA 3LG1A 4Q17A 4KTOA 4L3ZA 1EGEA 2EBAA 2E80A 2WBIA 3S7WA 3FCJA 3II9A 4WJYA 2A1TA 2FONA 2ZO5A 3D1IA 2C12A 4Q5CA 2C0UA 5K3HA 4X28A 1WS9A 3B96A 4U83A 3R7KA 3SWOA 2YYGA 1IS2A 2UXWA 3GNCA 4OO2A 2YYIA 4L3XA 3MDEA 2YYLA 1T9GA 2YYJA 3MDDA 4RM7A 3BNFA 1U8VA 3D9FA 1SIQA 3HWCA 2Z1QA 1OAHA 4ZYJA 1SIRA 3SCEA 1BUCA 3PFDA 1FS9A 1FS8A 1EGDA 2JIFA 4DOYA 2J7AA 3SF6A 3MKHA 1EGCA 1RX0A 4O5MA 5K3JA 2DVLA 2CX9A 4P13A 2E81A 3UU9A 4Q4UA 2RDZA 2JBSA 3LGQA 1FS7A 4L3YA 4N5FA 4IRNA 3OWMA 2RFQA 2DDHA 3X0YA 3BNGA 3TTBA 1R2JA 5K3GA 3RKHA 2OT4A 3GM6A 3TORA 2ZAFA 4M9AA 4ZXVA 3MXLA 3MPIA 3D9DA 2JBRA 1W07A 3L1TA 3FO3A 3UBRA 2D29A 4Q5BA 5K3IA 3NF4A 1GU6A 4JEKA 2R0MA 1QDBA 2IX5A 3AFFA 4XVXA 2IX6A 2VR0A 1IVHA 3AFEA 3EOMA 2OR0A 4Q0TA 3M9VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4X28 C;  3MMO A;  3X0X A;  2RF7 A;  3OWA A;  3D6B A;  2VIG A;  3EON A;  4NXL A;  1JQI A;  3D9E A;  3F29 A;  4KCF A;  3OIB A;  2YYK A;  2REH A;  4IV6 A;  4L38 A;  2PG0 A;  3BNJ A;  3P4T A;  4Q1O A;  2JBT A;  4L1F A;  2YYM A;  3BNH A;  3D9G A;  4G5E A;  3GQT A;  4HR3 A;  1UKW A;  3MPJ A;  3SXQ A;  1UDY A;  2R0N A;  4W9U A;  3LG1 A;  4Q17 A;  4KTO A;  4L3Z A;  1EGE A;  2EBA A;  2E80 A;  2WBI A;  3S7W A;  3FCJ A;  3II9 A;  4WJY A;  2A1T A;  2FON A;  2ZO5 A;  3D1I A;  2C12 A;  4Q5C A;  2C0U A;  5K3H A;  4X28 A;  1WS9 A;  3B96 A;  4U83 A;  3R7K A;  3SWO A;  2YYG A;  1IS2 A;  2UXW A;  3GNC A;  4OO2 A;  2YYI A;  4L3X A;  3MDE A;  2YYL A;  1T9G A;  2YYJ A;  3MDD A;  4RM7 A;  3BNF A;  1U8V A;  3D9F A;  1SIQ A;  3HWC A;  2Z1Q A;  1OAH A;  4ZYJ A;  1SIR A;  3SCE A;  1BUC A;  3PFD A;  1FS9 A;  1FS8 A;  1EGD A;  2JIF A;  4DOY A;  2J7A A;  3SF6 A;  3MKH A;  1EGC A;  1RX0 A;  4O5M A;  5K3J A;  2DVL A;  2CX9 A;  4P13 A;  2E81 A;  3UU9 A;  4Q4U A;  2RDZ A;  2JBS A;  3LGQ A;  1FS7 A;  4L3Y A;  4N5F A;  4IRN A;  3OWM A;  2RFQ A;  2DDH A;  3X0Y A;  3BNG A;  3TTB A;  1R2J A;  5K3G A;  3RKH A;  2OT4 A;  3GM6 A;  3TOR A;  2ZAF A;  4M9A A;  4ZXV A;  3MXL A;  3MPI A;  3D9D A;  2JBR A;  1W07 A;  3L1T A;  3FO3 A;  3UBR A;  2D29 A;  4Q5B A;  5K3I A;  3NF4 A;  1GU6 A;  4JEK A;  2R0M A;  1QDB A;  2IX5 A;  3AFF A;  4XVX A;  2IX6 A;  2VR0 A;  1IVH A;  3AFE A;  3EOM A;  2OR0 A;  4Q0T A;  3M9V A; 
#chains in the Genus database with same CATH topology
 4X28 C;  5BRM A;  2HJN A;  3C2P A;  3MMO A;  3X0X A;  2BU5 A;  2XS1 A;  2RF7 A;  1XFU A;  3OWA A;  4FF1 A;  2XQR B;  3D6B A;  2VIG A;  3EON A;  4NXL A;  1K90 A;  2R03 A;  3VKH A;  1JQI A;  3D9E A;  1RJ4 A;  3F29 A;  1JM6 A;  4KCF A;  3OIB A;  2YYK A;  2REH A;  4IV6 A;  1RJ1 A;  2YGW A;  4L38 A;  2PG0 A;  4V26 A;  3BNJ A;  2Q8G A;  3P4T A;  2CJ6 A;  4Q1O A;  5J6A A;  2JBT A;  4L1F A;  4MPC A;  1GKX A;  5EZ3 A;  2YYM A;  4MPE A;  2PO4 A;  3BNH A;  4JIZ A;  3D9G A;  4G5E A;  3GQT A;  4HR3 A;  3CE2 A;  1XG2 B;  3N0R A;  4E00 A;  1UKW A;  3MPJ A;  2CJ8 A;  2CJ7 A;  1UDY A;  1XFW A;  4LQQ B;  2R0N A;  3SXQ A;  3Q22 A;  1SK6 A;  4FF4 A;  4W9U A;  1PI1 A;  3LG1 A;  4Q17 A;  4KTO A;  4L3Z A;  1EGE A;  2EBA A;  2E80 A;  2WBI A;  3S7W A;  1K8T A;  1RP3 A;  3FCJ A;  3II9 A;  2OEX A;  2A1T A;  4H7Q A;  4JIO A;  4WJY A;  3Q0A A;  2FON A;  2ZKJ A;  2ZO5 A;  3D1I A;  2C12 A;  1X91 A;  4Q5C A;  2OEV A;  1Y8N A;  3U33 A;  2C0U A;  5K3H A;  4P79 A;  4X28 A;  1XFZ A;  1PK0 A;  3TZ0 A;  1WS9 A;  3B96 A;  4U83 A;  3R7K A;  2R02 A;  3SWO A;  5M4N A;  3VKG A;  4AKI A;  2YYG A;  3TZ5 A;  5M4K A;  1IS2 A;  2UXW A;  3GNC A;  4OO2 A;  2YYI A;  4MPN A;  3TZ2 A;  3C46 A;  2CJ4 A;  1X8Z A;  3KML A;  4L3X A;  1GJV A;  3MDE A;  2YYL A;  1Y0V A;  1T9G A;  4J1V A;  2YYJ A;  3MDD A;  4RM7 A;  3BNF A;  1S26 A;  3D9F A;  1U8V A;  1SIQ A;  2BU8 A;  1XFY A;  3HWC A;  4KSF A;  4G97 A;  5J71 A;  4HKR A;  2Z1Q A;  2CJ5 A;  4AKG A;  2AZE A;  1OAH A;  5GJV E;  4ZYJ A;  3CRK A;  1SIR A;  1LVC A;  2FP1 A;  3SCE A;  3VAD A;  1BUC A;  3PFD A;  1XFX A;  4FF3 A;  1FS9 A;  2F6L A;  1FS8 A;  4H85 A;  4E01 A;  1EGD A;  2JIF A;  4DOY A;  2J7A A;  5GJW E;  3SF6 A;  3MKH A;  1EGC A;  1RX0 A;  4O5M A;  5K3J A;  2FP2 A;  1Y8O A;  1X90 A;  2R05 A;  2ZDY A;  1R3B A;  2DVL A;  2CX9 A;  4P13 A;  1GKZ A;  2E81 A;  4MP7 A;  3UU9 A;  4Q4U A;  2RDZ A;  2JBS A;  2BU6 A;  3LGQ A;  1FS7 A;  2Q8H A;  3DJL A;  4V25 A;  3TZ4 A;  4L3Y A;  2OJQ A;  5BRK A;  4KSA A;  4LQS B;  4N5F A;  4IRN A;  3OWM A;  2RFQ A;  5B5W A;  4F0X A;  2E0A A;  3D2R A;  1XFV A;  2DDH A;  3X0Y A;  2EBH X;  3X29 A;  4HKS A;  3BNG A;  4MP2 A;  4AKH A;  1Y8P A;  2BU2 A;  2LFW A;  1SC5 A;  1R2J A;  5K3G A;  3TTB A;  3RKH A;  2OT4 A;  3Q23 A;  4H81 A;  2AO2 A;  3GM6 A;  3TOR A;  2ZAF A;  4M9A A;  4ZXV A;  2XS8 A;  3MXL A;  3MPI A;  3D9D A;  2JBR A;  2GBB A;  1W07 A;  3L1T A;  3FO3 A;  3Q24 A;  3CRL A;  5B5V A;  2D29 A;  2VF1 A;  1K93 A;  4Q5B A;  3UBR A;  2Q8I A;  5K3I A;  5B6B A;  5M4P A;  3NF4 A;  1GU6 A;  2BU7 A;  4JEK A;  4FF2 A;  4AI6 A;  2R0M A;  1QDB A;  2QR4 A;  2IX5 A;  3AFF A;  2BTZ A;  2ZDX A;  4XVX A;  4QIC A;  2Q8F A;  3C3L A;  2IX6 A;  4KS9 A;  2VR0 A;  1IVH A;  5M4M A;  2EBF X;  3AFE A;  3EOM A;  2OR0 A;  4DZY A;  2PNR A;  4Q0T A;  4E02 A;  2EC5 A;  3M9V A;  4FZ4 A; 
#chains in the Genus database with same CATH homology
 4X28 C;  3MMO A;  3X0X A;  2RF7 A;  3OWA A;  3D6B A;  2VIG A;  3EON A;  4NXL A;  1JQI A;  3D9E A;  3F29 A;  4KCF A;  3OIB A;  2YYK A;  2REH A;  4IV6 A;  4L38 A;  2PG0 A;  3BNJ A;  3P4T A;  4Q1O A;  2JBT A;  4L1F A;  2YYM A;  3BNH A;  3D9G A;  4G5E A;  3GQT A;  4HR3 A;  1UKW A;  3MPJ A;  3SXQ A;  1UDY A;  2R0N A;  4W9U A;  3LG1 A;  4Q17 A;  4KTO A;  4L3Z A;  1EGE A;  2EBA A;  2E80 A;  2WBI A;  3S7W A;  3FCJ A;  3II9 A;  4WJY A;  2A1T A;  2FON A;  2ZO5 A;  3D1I A;  2C12 A;  4Q5C A;  2C0U A;  5K3H A;  4X28 A;  1WS9 A;  3B96 A;  4U83 A;  3R7K A;  3SWO A;  2YYG A;  1IS2 A;  2UXW A;  3GNC A;  4OO2 A;  2YYI A;  4L3X A;  3MDE A;  2YYL A;  1T9G A;  2YYJ A;  3MDD A;  4RM7 A;  3BNF A;  1U8V A;  3D9F A;  1SIQ A;  3HWC A;  2Z1Q A;  1OAH A;  4ZYJ A;  1SIR A;  3SCE A;  1BUC A;  3PFD A;  1FS9 A;  1FS8 A;  1EGD A;  2JIF A;  4DOY A;  2J7A A;  3SF6 A;  3MKH A;  1EGC A;  1RX0 A;  4O5M A;  5K3J A;  2DVL A;  2CX9 A;  4P13 A;  2E81 A;  3UU9 A;  4Q4U A;  2RDZ A;  2JBS A;  3LGQ A;  1FS7 A;  4L3Y A;  4N5F A;  4IRN A;  3OWM A;  2RFQ A;  2DDH A;  3X0Y A;  3BNG A;  3TTB A;  1R2J A;  5K3G A;  3RKH A;  2OT4 A;  3GM6 A;  3TOR A;  2ZAF A;  4M9A A;  4ZXV A;  3MXL A;  3MPI A;  3D9D A;  2JBR A;  1W07 A;  3L1T A;  3FO3 A;  3UBR A;  2D29 A;  4Q5B A;  5K3I A;  3NF4 A;  1GU6 A;  4JEK A;  2R0M A;  1QDB A;  2IX5 A;  3AFF A;  4XVX A;  2IX6 A;  2VR0 A;  1IVH A;  3AFE A;  3EOM A;  2OR0 A;  4Q0T A;  3M9V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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