3FCJA

Nitroalkane oxidase: mutant402n crystallized with nitroethane
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
431
structure length
431
Chain Sequence
b'VDFKLSPSQLEARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATALGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFNGGNIGLRRRQMQRVMALEDYEPWAATYGSS'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Differential quantum tunneling contributions in nitroalkane oxidase catalyzed and the uncatalyzed proton transfer reaction.
pubmed doi rcsb
molecule keywords Nitroalkane oxidase
source organism Fusarium oxysporum
molecule tags Oxidoreductase
total genus 159
structure length 431
sequence length 431
chains with identical sequence B, C, D
ec nomenclature ec 1.7.3.1: Nitroalkane oxidase.
pdb deposition date 2008-11-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 3fcjA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3fcjA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 3fcjA02
4L3XA 3D9FA 2RF7A 3AFEA 4OO2A 4JEKA 1IVHA 3MMOA 3TTBA 4RM7A 2C0UA 3MPIA 4Q17A 3LG1A 2DVLA 3TORA 1FS7A 4L1FA 3BNGA 3GQTA 2D29A 1U8VA 1UDYA 4X28A 4O5MA 2YYLA 2VIGA 3SCEA 3II9A 2JBSA 2R0MA 3BNFA 3OIBA 4ZYJA 2FONA 2R0NA 2OR0A 4X28C 4G5EA 1R2JA 3B96A 2Z1QA 2JBTA 4XVXA 2UXWA 2EBAA 4IRNA 1T9GA 3M9VA 2ZO5A 4DOYA 3AFFA 1SIRA 2YYJA 2JIFA 2VR0A 4Q5BA 4Q1OA 2RFQA 2RDZA 3MDEA 3OWMA 1FS8A 2IX5A 4HR3A 1IS2A 3X0YA 3SXQA 3BNHA 2A1TA 4WJYA 4N5FA 2E80A 3MXLA 1FS9A 2YYMA 3P4TA 1BUCA 1OAHA 2OT4A 3BNJA 2YYKA 3GM6A 1EGEA 4L38A 4Q5CA 4KTOA 2WBIA 2J7AA 3X0XA 3D1IA 1GU6A 5K3GA 5K3IA 3FCJA 3EOMA 1SIQA 3L1TA 3SF6A 2ZAFA 3LGQA 2YYIA 4NXLA 1EGCA 5K3JA 1W07A 4Q4UA 3R7KA 3MPJA 2CX9A 3EONA 3HWCA 3D9GA 4IV6A 2JBRA 3S7WA 1WS9A 4M9AA 3SWOA 3NF4A 4U83A 4P13A 3FO3A 2PG0A 4L3ZA 1UKWA 3UU9A 3OWAA 1QDBA 3UBRA 4W9UA 5K3HA 1RX0A 3D9DA 2REHA 2YYGA 2C12A 3GNCA 3RKHA 3MKHA 3D6BA 1EGDA 1JQIA 2DDHA 3PFDA 2IX6A 3MDDA 3F29A 4Q0TA 4ZXVA 2E81A 4KCFA 3D9EA 4L3YA
chains in the Genus database with same CATH superfamily
1XFXA 4L3XA 3D9FA 5B6BA 2RF7A 1LVCA 5EZ3A 1RJ1A 2XS1A 3AFEA 1K90A 2FP1A 4OO2A 4JEKA 1IVHA 3TZ4A 5M4MA 3MMOA 2QR4A 4JIZA 4E01A 3TTBA 4RM7A 2C0UA 2PO4A 2XQRB 3DJLA 3MPIA 4Q17A 3LG1A 5GJVE 2DVLA 3TORA 1GKXA 1FS7A 4L1FA 3BNGA 3GQTA 2D29A 1U8VA 2ZDXA 1UDYA 4X28A 1S26A 4O5MA 2YYLA 3TZ2A 2VIGA 3SCEA 3II9A 5M4PA 2JBSA 4G97A 2R0MA 3BNFA 4LQSB 1Y8PA 3OIBA 4ZYJA 2FONA 5BRMA 2R0NA 5J71A 3CRKA 2OR0A 4X28C 4G5EA 1RJ4A 1R2JA 3B96A 2AO2A 2Z1QA 2YGWA 4MPCA 2Q8HA 5J6AA 2JBTA 2CJ8A 4XVXA 2UXWA 2EBAA 2GBBA 2PNRA 3N0RA 4FF4A 4IRNA 1GJVA 1RP3A 4P79A 1T9GA 3M9VA 2ZO5A 4DOYA 3AFFA 1SIRA 2YYJA 2JIFA 2VR0A 2CJ5A 4Q5BA 2EBHX 2RFQA 1K93A 2RDZA 3MDEA 3OWMA 4J1VA 4JIOA 4LQQB 4Q1OA 1JM6A 2IX5A 1FS8A 4MP2A 4AI6A 4HR3A 4KS9A 4AKIA 1IS2A 2R05A 3X0YA 4MP7A 3SXQA 3BNHA 2EC5A 2A1TA 2FP2A 4H7QA 4N5FA 4WJYA 4F0XA 2E80A 4AKHA 2CJ7A 3MXLA 1FS9A 2YYMA 4FZ4A 3P4TA 2BTZA 4QICA 1BUCA 3C46A 1OAHA 1PI1A 4DZYA 4FF1A 3CE2A 4V25A 4AKGA 2OT4A 3BNJA 3KMLA 2YYKA 3GM6A 1EGEA 4L38A 4Q5CA 3C3LA 4FF2A 4KTOA 2WBIA 2J7AA 3D2RA 3X0XA 3U33A 3D1IA 1GU6A 2R03A 5K3GA 5K3IA 3FCJA 1XFWA 2Q8FA 3EOMA 2CJ6A 2BU2A 1SIQA 1K8TA 3L1TA 2Q8GA 4E02A 3SF6A 1PK0A 2ZAFA 3LGQA 2YYIA 1Y8OA 3TZ5A 2XS8A 4NXLA 4V26A 1EGCA 5K3JA 1XFVA 1W07A 4E00A 4H81A 3R7KA 4Q4UA 3MPJA 2HJNA 4FF3A 2CX9A 2BU7A 3X29A 2EBFX 3EONA 2CJ4A 3D9GA 3HWCA 4IV6A 4KSFA 2JBRA 2R02A 5B5VA 3TZ0A 3VADA 3S7WA 1WS9A 4M9AA 2ZDYA 4HKRA 3SWOA 3NF4A 4U83A 1XFUA 1XFYA 2BU8A 4P13A 5B5WA 2E0AA 1X90A 3FO3A 2AZEA 4KSAA 2VF1A 2PG0A 1SK6A 4L3ZA 1UKWA 1GKZA 1SC5A 2BU6A 4H85A 4MPNA 3UU9A 2F6LA 4MPEA 1X91A 2Q8IA 3OWAA 1QDBA 3UBRA 4W9UA 1Y0VA 5GJWE 5BRKA 3Q24A 5K3HA 1RX0A 3D9DA 2REHA 2YYGA 2C12A 3VKGA 3Q0AA 1X8ZA 5M4KA 3GNCA 3RKHA 3C2PA 2OEXA 3MKHA 1XG2B 3D6BA 1EGDA 1JQIA 1Y8NA 2OJQA 2DDHA 3VKHA 3PFDA 2IX6A 3MDDA 1XFZA 2OEVA 3CRLA 3F29A 4Q0TA 4ZXVA 1R3BA 3Q22A 4HKSA 2E81A 5M4NA 4KCFA 2BU5A 3D9EA 2LFWA 2ZKJA 3Q23A 4L3YA
chains in the Genus database with same CATH topology
4L3XA 3D9FA 2RF7A 3AFEA 4OO2A 4JEKA 1IVHA 3MMOA 3TTBA 4RM7A 2C0UA 3MPIA 4Q17A 3LG1A 2DVLA 3TORA 1FS7A 4L1FA 3BNGA 3GQTA 2D29A 1U8VA 1UDYA 4X28A 4O5MA 2YYLA 2VIGA 3SCEA 3II9A 2JBSA 2R0MA 3BNFA 3OIBA 4ZYJA 2FONA 2R0NA 2OR0A 4X28C 4G5EA 1R2JA 3B96A 2Z1QA 2JBTA 4XVXA 2UXWA 2EBAA 4IRNA 1T9GA 3M9VA 2ZO5A 4DOYA 3AFFA 1SIRA 2YYJA 2JIFA 2VR0A 4Q5BA 4Q1OA 2RFQA 2RDZA 3MDEA 3OWMA 1FS8A 2IX5A 4HR3A 1IS2A 3X0YA 3SXQA 3BNHA 2A1TA 4WJYA 4N5FA 2E80A 3MXLA 1FS9A 2YYMA 3P4TA 1BUCA 1OAHA 2OT4A 3BNJA 2YYKA 3GM6A 1EGEA 4L38A 4Q5CA 4KTOA 2WBIA 2J7AA 3X0XA 3D1IA 1GU6A 5K3GA 5K3IA 3FCJA 3EOMA 1SIQA 3L1TA 3SF6A 2ZAFA 3LGQA 2YYIA 4NXLA 1EGCA 5K3JA 1W07A 4Q4UA 3R7KA 3MPJA 2CX9A 3EONA 3HWCA 3D9GA 4IV6A 2JBRA 3S7WA 1WS9A 4M9AA 3SWOA 3NF4A 4U83A 4P13A 3FO3A 2PG0A 4L3ZA 1UKWA 3UU9A 3OWAA 1QDBA 3UBRA 4W9UA 5K3HA 1RX0A 3D9DA 2REHA 2YYGA 2C12A 3GNCA 3RKHA 3MKHA 3D6BA 1EGDA 1JQIA 2DDHA 3PFDA 2IX6A 3MDDA 3F29A 4Q0TA 4ZXVA 2E81A 4KCFA 3D9EA 4L3YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4L3X A;  3D9F A;  2RF7 A;  3AFE A;  4OO2 A;  4JEK A;  1IVH A;  3MMO A;  3TTB A;  4RM7 A;  2C0U A;  3MPI A;  4Q17 A;  3LG1 A;  2DVL A;  3TOR A;  1FS7 A;  4L1F A;  3BNG A;  3GQT A;  2D29 A;  1U8V A;  1UDY A;  4X28 A;  4O5M A;  2YYL A;  2VIG A;  3SCE A;  3II9 A;  2JBS A;  2R0M A;  3BNF A;  3OIB A;  4ZYJ A;  2FON A;  2R0N A;  2OR0 A;  4X28 C;  4G5E A;  1R2J A;  3B96 A;  2Z1Q A;  2JBT A;  4XVX A;  2UXW A;  2EBA A;  4IRN A;  1T9G A;  3M9V A;  2ZO5 A;  4DOY A;  3AFF A;  1SIR A;  2YYJ A;  2JIF A;  2VR0 A;  4Q5B A;  4Q1O A;  2RFQ A;  2RDZ A;  3MDE A;  3OWM A;  1FS8 A;  2IX5 A;  4HR3 A;  1IS2 A;  3X0Y A;  3SXQ A;  3BNH A;  2A1T A;  4WJY A;  4N5F A;  2E80 A;  3MXL A;  1FS9 A;  2YYM A;  3P4T A;  1BUC A;  1OAH A;  2OT4 A;  3BNJ A;  2YYK A;  3GM6 A;  1EGE A;  4L38 A;  4Q5C A;  4KTO A;  2WBI A;  2J7A A;  3X0X A;  3D1I A;  1GU6 A;  5K3G A;  5K3I A;  3FCJ A;  3EOM A;  1SIQ A;  3L1T A;  3SF6 A;  2ZAF A;  3LGQ A;  2YYI A;  4NXL A;  1EGC A;  5K3J A;  1W07 A;  4Q4U A;  3R7K A;  3MPJ A;  2CX9 A;  3EON A;  3HWC A;  3D9G A;  4IV6 A;  2JBR A;  3S7W A;  1WS9 A;  4M9A A;  3SWO A;  3NF4 A;  4U83 A;  4P13 A;  3FO3 A;  2PG0 A;  4L3Z A;  1UKW A;  3UU9 A;  3OWA A;  1QDB A;  3UBR A;  4W9U A;  5K3H A;  1RX0 A;  3D9D A;  2REH A;  2YYG A;  2C12 A;  3GNC A;  3RKH A;  3MKH A;  3D6B A;  1EGD A;  1JQI A;  2DDH A;  3PFD A;  2IX6 A;  3MDD A;  3F29 A;  4Q0T A;  4ZXV A;  2E81 A;  4KCF A;  3D9E A;  4L3Y A; 
#chains in the Genus database with same CATH topology
 1XFX A;  4L3X A;  3D9F A;  5B6B A;  2RF7 A;  1LVC A;  5EZ3 A;  1RJ1 A;  2XS1 A;  3AFE A;  1K90 A;  2FP1 A;  4OO2 A;  4JEK A;  1IVH A;  3TZ4 A;  5M4M A;  3MMO A;  2QR4 A;  4JIZ A;  4E01 A;  3TTB A;  4RM7 A;  2C0U A;  2PO4 A;  2XQR B;  3DJL A;  3MPI A;  4Q17 A;  3LG1 A;  5GJV E;  2DVL A;  3TOR A;  1GKX A;  1FS7 A;  4L1F A;  3BNG A;  3GQT A;  2D29 A;  1U8V A;  2ZDX A;  1UDY A;  4X28 A;  1S26 A;  4O5M A;  2YYL A;  3TZ2 A;  2VIG A;  3SCE A;  3II9 A;  5M4P A;  2JBS A;  4G97 A;  2R0M A;  3BNF A;  4LQS B;  1Y8P A;  3OIB A;  4ZYJ A;  2FON A;  5BRM A;  2R0N A;  5J71 A;  3CRK A;  2OR0 A;  4X28 C;  4G5E A;  1RJ4 A;  1R2J A;  3B96 A;  2AO2 A;  2Z1Q A;  2YGW A;  4MPC A;  2Q8H A;  5J6A A;  2JBT A;  2CJ8 A;  4XVX A;  2UXW A;  2EBA A;  2GBB A;  2PNR A;  3N0R A;  4FF4 A;  4IRN A;  1GJV A;  1RP3 A;  4P79 A;  1T9G A;  3M9V A;  2ZO5 A;  4DOY A;  3AFF A;  1SIR A;  2YYJ A;  2JIF A;  2VR0 A;  2CJ5 A;  4Q5B A;  2EBH X;  2RFQ A;  1K93 A;  2RDZ A;  3MDE A;  3OWM A;  4J1V A;  4JIO A;  4LQQ B;  4Q1O A;  1JM6 A;  2IX5 A;  1FS8 A;  4MP2 A;  4AI6 A;  4HR3 A;  4KS9 A;  4AKI A;  1IS2 A;  2R05 A;  3X0Y A;  4MP7 A;  3SXQ A;  3BNH A;  2EC5 A;  2A1T A;  2FP2 A;  4H7Q A;  4N5F A;  4WJY A;  4F0X A;  2E80 A;  4AKH A;  2CJ7 A;  3MXL A;  1FS9 A;  2YYM A;  4FZ4 A;  3P4T A;  2BTZ A;  4QIC A;  1BUC A;  3C46 A;  1OAH A;  1PI1 A;  4DZY A;  4FF1 A;  3CE2 A;  4V25 A;  4AKG A;  2OT4 A;  3BNJ A;  3KML A;  2YYK A;  3GM6 A;  1EGE A;  4L38 A;  4Q5C A;  3C3L A;  4FF2 A;  4KTO A;  2WBI A;  2J7A A;  3D2R A;  3X0X A;  3U33 A;  3D1I A;  1GU6 A;  2R03 A;  5K3G A;  5K3I A;  3FCJ A;  1XFW A;  2Q8F A;  3EOM A;  2CJ6 A;  2BU2 A;  1SIQ A;  1K8T A;  3L1T A;  2Q8G A;  4E02 A;  3SF6 A;  1PK0 A;  2ZAF A;  3LGQ A;  2YYI A;  1Y8O A;  3TZ5 A;  2XS8 A;  4NXL A;  4V26 A;  1EGC A;  5K3J A;  1XFV A;  1W07 A;  4E00 A;  4H81 A;  3R7K A;  4Q4U A;  3MPJ A;  2HJN A;  4FF3 A;  2CX9 A;  2BU7 A;  3X29 A;  2EBF X;  3EON A;  2CJ4 A;  3D9G A;  3HWC A;  4IV6 A;  4KSF A;  2JBR A;  2R02 A;  5B5V A;  3TZ0 A;  3VAD A;  3S7W A;  1WS9 A;  4M9A A;  2ZDY A;  4HKR A;  3SWO A;  3NF4 A;  4U83 A;  1XFU A;  1XFY A;  2BU8 A;  4P13 A;  5B5W A;  2E0A A;  1X90 A;  3FO3 A;  2AZE A;  4KSA A;  2VF1 A;  2PG0 A;  1SK6 A;  4L3Z A;  1UKW A;  1GKZ A;  1SC5 A;  2BU6 A;  4H85 A;  4MPN A;  3UU9 A;  2F6L A;  4MPE A;  1X91 A;  2Q8I A;  3OWA A;  1QDB A;  3UBR A;  4W9U A;  1Y0V A;  5GJW E;  5BRK A;  3Q24 A;  5K3H A;  1RX0 A;  3D9D A;  2REH A;  2YYG A;  2C12 A;  3VKG A;  3Q0A A;  1X8Z A;  5M4K A;  3GNC A;  3RKH A;  3C2P A;  2OEX A;  3MKH A;  1XG2 B;  3D6B A;  1EGD A;  1JQI A;  1Y8N A;  2OJQ A;  2DDH A;  3VKH A;  3PFD A;  2IX6 A;  3MDD A;  1XFZ A;  2OEV A;  3CRL A;  3F29 A;  4Q0T A;  4ZXV A;  1R3B A;  3Q22 A;  4HKS A;  2E81 A;  5M4N A;  4KCF A;  2BU5 A;  3D9E A;  2LFW A;  2ZKJ A;  3Q23 A;  4L3Y A; 
#chains in the Genus database with same CATH homology
 4L3X A;  3D9F A;  2RF7 A;  3AFE A;  4OO2 A;  4JEK A;  1IVH A;  3MMO A;  3TTB A;  4RM7 A;  2C0U A;  3MPI A;  4Q17 A;  3LG1 A;  2DVL A;  3TOR A;  1FS7 A;  4L1F A;  3BNG A;  3GQT A;  2D29 A;  1U8V A;  1UDY A;  4X28 A;  4O5M A;  2YYL A;  2VIG A;  3SCE A;  3II9 A;  2JBS A;  2R0M A;  3BNF A;  3OIB A;  4ZYJ A;  2FON A;  2R0N A;  2OR0 A;  4X28 C;  4G5E A;  1R2J A;  3B96 A;  2Z1Q A;  2JBT A;  4XVX A;  2UXW A;  2EBA A;  4IRN A;  1T9G A;  3M9V A;  2ZO5 A;  4DOY A;  3AFF A;  1SIR A;  2YYJ A;  2JIF A;  2VR0 A;  4Q5B A;  4Q1O A;  2RFQ A;  2RDZ A;  3MDE A;  3OWM A;  1FS8 A;  2IX5 A;  4HR3 A;  1IS2 A;  3X0Y A;  3SXQ A;  3BNH A;  2A1T A;  4WJY A;  4N5F A;  2E80 A;  3MXL A;  1FS9 A;  2YYM A;  3P4T A;  1BUC A;  1OAH A;  2OT4 A;  3BNJ A;  2YYK A;  3GM6 A;  1EGE A;  4L38 A;  4Q5C A;  4KTO A;  2WBI A;  2J7A A;  3X0X A;  3D1I A;  1GU6 A;  5K3G A;  5K3I A;  3FCJ A;  3EOM A;  1SIQ A;  3L1T A;  3SF6 A;  2ZAF A;  3LGQ A;  2YYI A;  4NXL A;  1EGC A;  5K3J A;  1W07 A;  4Q4U A;  3R7K A;  3MPJ A;  2CX9 A;  3EON A;  3HWC A;  3D9G A;  4IV6 A;  2JBR A;  3S7W A;  1WS9 A;  4M9A A;  3SWO A;  3NF4 A;  4U83 A;  4P13 A;  3FO3 A;  2PG0 A;  4L3Z A;  1UKW A;  3UU9 A;  3OWA A;  1QDB A;  3UBR A;  4W9U A;  5K3H A;  1RX0 A;  3D9D A;  2REH A;  2YYG A;  2C12 A;  3GNC A;  3RKH A;  3MKH A;  3D6B A;  1EGD A;  1JQI A;  2DDH A;  3PFD A;  2IX6 A;  3MDD A;  3F29 A;  4Q0T A;  4ZXV A;  2E81 A;  4KCF A;  3D9E A;  4L3Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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