3FG6A

Structure of the c-terminus of adseverin
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
320
structure length
296
Chain Sequence
GKVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVLKCKTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLTPIVIIKQGHEPPTFTGWFLGWDSSKW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Actin-binding protein
molecule keywords Adseverin
publication title The crystal structure of the C-terminus of adseverin reveals the actin-binding interface.
pubmed doi rcsb
source organism Homo sapiens
total genus 86
structure length 296
sequence length 320
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature
pdb deposition date 2008-12-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00626 Gelsolin Gelsolin repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 3fg6A03
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 3fg6A02
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 3fg6A01
2MV2A 2VACA 1M4JA 1J72A 2XFAA 4KEEA 5KYWB 1WNJA 4CBXG 3FFNA 1NMDG 1AHQA 3EGDA 5HVKD 1PD1A 5KYUA 3TU5B 5KYYA 1NLVG 3Q2BA 1D4XG 2D8BA 1T44G 1Q8XA 5KYXB 1COFA 2MP4A 4KEDA 1HQZ1 2FH3A 3CI5G 5FAEA 2FGHA 4PKGG 1NPHA 2FF3A 2NUTB 1KCQA 2MOTA 1MDUA 1WM4A 1EQYS 1X67A 4Z94G 1ESVS 5IVUA 4PKHB 3FG7A 4BEX1 2XF1A 5KYXA 2W0IA 1RGIG 2FH1A 3EFOA 3EG9A 1PD0A 2VIKA 1M2OA 3A5MS 3EFOB 1WFSA 2NUTA 3CJCG 1M2VB 3EG9B 2LJ8A 1AK6A 3EH1A 4PKIG 2KVKA 1TMWA 1T3YA 2FH4A 1Q8GA 4CBUG 3DAWB 1H1VG 4LIZA 2HD7A 3CIPG 1CFYA 3A5OS 2QTVA 5HVKB 3A5NS 4CBWG 5L6WC 1C0GS 1VKKA 1T2LA 4S10C 2FH2A 5DD2A 1NM1G 1CNUA 3EGXB 3FFKA 3L50A 1DEJS 1M2VA 1VFQA 1SVYA 1T3XA 4KEFA 1TVJA 3FG6A 2VILA 5A1MA 1F7SA 2NUPA 1V6FA 1P8XA 1AK7A 1SVQA 2LXXA 5FAFA 2LLFA 2NUPB 1PCXA 3EGXA 3A5LS 1C0FS 3EGDB 1YAGG 5KYUB 1UDMA 5KYYB 2I2QA 4JD2H 1JHWA 3CJBG 5KYNA 2FF6G 5KYWA 1D0NA 1SVRA 3EH2A 1QPVA 1YVNG 1P8ZG 2L72A
chains in the Genus database with same CATH superfamily
2MV2A 2VACA 1M4JA 1J72A 2XFAA 4KEEA 5KYWB 1WNJA 4CBXG 3FFNA 1NMDG 1AHQA 3EGDA 5HVKD 1PD1A 5KYUA 3TU5B 5KYYA 1NLVG 3Q2BA 1D4XG 2D8BA 1T44G 1Q8XA 5KYXB 1COFA 2MP4A 4KEDA 1HQZ1 2FH3A 3CI5G 5FAEA 2FGHA 4PKGG 1NPHA 2FF3A 2NUTB 1KCQA 2MOTA 1MDUA 1WM4A 1EQYS 1X67A 4Z94G 1ESVS 5IVUA 4PKHB 3FG7A 4BEX1 2XF1A 5KYXA 2W0IA 1RGIG 2FH1A 3EFOA 3EG9A 1PD0A 2VIKA 1M2OA 3A5MS 3EFOB 1WFSA 2NUTA 3CJCG 1M2VB 3EG9B 2LJ8A 1AK6A 3EH1A 4PKIG 2KVKA 1TMWA 1T3YA 2FH4A 1Q8GA 4CBUG 3DAWB 1H1VG 4LIZA 2HD7A 3CIPG 1CFYA 3A5OS 2QTVA 5HVKB 3A5NS 4CBWG 5L6WC 1C0GS 1VKKA 1T2LA 4S10C 2FH2A 5DD2A 1NM1G 1CNUA 3EGXB 3FFKA 3L50A 1DEJS 1M2VA 1VFQA 1SVYA 1T3XA 4KEFA 1TVJA 3FG6A 2VILA 5A1MA 1F7SA 2NUPA 1V6FA 1P8XA 1AK7A 1SVQA 2LXXA 5FAFA 2LLFA 2NUPB 1PCXA 3EGXA 3A5LS 1C0FS 3EGDB 3DA7A 1YAGG 5KYUB 1UDMA 5KYYB 2I2QA 4JD2H 1JHWA 3CJBG 5KYNA 2FF6G 5KYWA 1D0NA 1SVRA 3EH2A 1QPVA 1YVNG 1P8ZG 2L72A
chains in the Genus database with same CATH topology
2MV2A 2VACA 1M4JA 1J72A 2XFAA 4KEEA 5KYWB 1WNJA 4CBXG 3FFNA 1NMDG 1AHQA 3EGDA 5HVKD 1PD1A 5KYUA 3TU5B 5KYYA 1NLVG 3Q2BA 1D4XG 2D8BA 1T44G 1Q8XA 5KYXB 1COFA 2MP4A 4KEDA 1HQZ1 2FH3A 3CI5G 5FAEA 2FGHA 4PKGG 1NPHA 2FF3A 2NUTB 1KCQA 2MOTA 1MDUA 1WM4A 1EQYS 1X67A 4Z94G 1ESVS 5IVUA 4PKHB 3FG7A 4BEX1 2XF1A 5KYXA 2W0IA 1RGIG 2FH1A 3EFOA 3EG9A 1PD0A 2VIKA 1M2OA 3A5MS 3EFOB 1WFSA 2NUTA 3CJCG 1M2VB 3EG9B 2LJ8A 1AK6A 3EH1A 4PKIG 2KVKA 1TMWA 1T3YA 2FH4A 1Q8GA 4CBUG 3DAWB 1H1VG 4LIZA 2HD7A 3CIPG 1CFYA 3A5OS 2QTVA 5HVKB 3A5NS 4CBWG 5L6WC 1C0GS 1VKKA 1T2LA 4S10C 2FH2A 5DD2A 1NM1G 1CNUA 3EGXB 3FFKA 3L50A 1DEJS 1M2VA 1VFQA 1SVYA 1T3XA 4KEFA 1TVJA 3FG6A 2VILA 5A1MA 1F7SA 2NUPA 1V6FA 1P8XA 1AK7A 1SVQA 2LXXA 5FAFA 2LLFA 2NUPB 1PCXA 3EGXA 3A5LS 1C0FS 3EGDB 3DA7A 1YAGG 5KYUB 1UDMA 5KYYB 2I2QA 4JD2H 1JHWA 3CJBG 5KYNA 2FF6G 5KYWA 1D0NA 1SVRA 3EH2A 1QPVA 1YVNG 1P8ZG 2L72A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MV2 A;  2VAC A;  1M4J A;  1J72 A;  2XFA A;  4KEE A;  5KYW B;  1WNJ A;  4CBX G;  3FFN A;  1NMD G;  1AHQ A;  3EGD A;  5HVK D;  1PD1 A;  5KYU A;  3TU5 B;  5KYY A;  1NLV G;  3Q2B A;  1D4X G;  2D8B A;  1T44 G;  1Q8X A;  5KYX B;  1COF A;  2MP4 A;  4KED A;  1HQZ 1;  2FH3 A;  3CI5 G;  5FAE A;  2FGH A;  4PKG G;  1NPH A;  2FF3 A;  2NUT B;  1KCQ A;  2MOT A;  1MDU A;  1WM4 A;  1EQY S;  1X67 A;  4Z94 G;  1ESV S;  5IVU A;  4PKH B;  3FG7 A;  4BEX 1;  2XF1 A;  5KYX A;  2W0I A;  1RGI G;  2FH1 A;  3EFO A;  3EG9 A;  1PD0 A;  2VIK A;  1M2O A;  3A5M S;  3EFO B;  1WFS A;  2NUT A;  3CJC G;  1M2V B;  3EG9 B;  2LJ8 A;  1AK6 A;  3EH1 A;  4PKI G;  2KVK A;  1TMW A;  1T3Y A;  2FH4 A;  1Q8G A;  4CBU G;  3DAW B;  1H1V G;  4LIZ A;  2HD7 A;  3CIP G;  1CFY A;  3A5O S;  2QTV A;  5HVK B;  3A5N S;  4CBW G;  5L6W C;  1C0G S;  1VKK A;  1T2L A;  4S10 C;  2FH2 A;  5DD2 A;  1NM1 G;  1CNU A;  3EGX B;  3FFK A;  3L50 A;  1DEJ S;  1M2V A;  1VFQ A;  1SVY A;  1T3X A;  4KEF A;  1TVJ A;  3FG6 A;  2VIL A;  5A1M A;  1F7S A;  2NUP A;  1V6F A;  1P8X A;  1AK7 A;  1SVQ A;  2LXX A;  5FAF A;  2LLF A;  2NUP B;  1PCX A;  3EGX A;  3A5L S;  1C0F S;  3EGD B;  1YAG G;  5KYU B;  1UDM A;  5KYY B;  2I2Q A;  4JD2 H;  1JHW A;  3CJB G;  5KYN A;  2FF6 G;  5KYW A;  1D0N A;  1SVR A;  3EH2 A;  1QPV A;  1YVN G;  1P8Z G;  2L72 A; 
#chains in the Genus database with same CATH topology
 2MV2 A;  2VAC A;  1M4J A;  1J72 A;  2XFA A;  4KEE A;  5KYW B;  1WNJ A;  4CBX G;  3FFN A;  1NMD G;  1AHQ A;  3EGD A;  5HVK D;  1PD1 A;  5KYU A;  3TU5 B;  5KYY A;  1NLV G;  3Q2B A;  1D4X G;  2D8B A;  1T44 G;  1Q8X A;  5KYX B;  1COF A;  2MP4 A;  4KED A;  1HQZ 1;  2FH3 A;  3CI5 G;  5FAE A;  2FGH A;  4PKG G;  1NPH A;  2FF3 A;  2NUT B;  1KCQ A;  2MOT A;  1MDU A;  1WM4 A;  1EQY S;  1X67 A;  4Z94 G;  1ESV S;  5IVU A;  4PKH B;  3FG7 A;  4BEX 1;  2XF1 A;  5KYX A;  2W0I A;  1RGI G;  2FH1 A;  3EFO A;  3EG9 A;  1PD0 A;  2VIK A;  1M2O A;  3A5M S;  3EFO B;  1WFS A;  2NUT A;  3CJC G;  1M2V B;  3EG9 B;  2LJ8 A;  1AK6 A;  3EH1 A;  4PKI G;  2KVK A;  1TMW A;  1T3Y A;  2FH4 A;  1Q8G A;  4CBU G;  3DAW B;  1H1V G;  4LIZ A;  2HD7 A;  3CIP G;  1CFY A;  3A5O S;  2QTV A;  5HVK B;  3A5N S;  4CBW G;  5L6W C;  1C0G S;  1VKK A;  1T2L A;  4S10 C;  2FH2 A;  5DD2 A;  1NM1 G;  1CNU A;  3EGX B;  3FFK A;  3L50 A;  1DEJ S;  1M2V A;  1VFQ A;  1SVY A;  1T3X A;  4KEF A;  1TVJ A;  3FG6 A;  2VIL A;  5A1M A;  1F7S A;  2NUP A;  1V6F A;  1P8X A;  1AK7 A;  1SVQ A;  2LXX A;  5FAF A;  2LLF A;  2NUP B;  1PCX A;  3EGX A;  3A5L S;  1C0F S;  3EGD B;  3DA7 A;  1YAG G;  5KYU B;  1UDM A;  5KYY B;  2I2Q A;  4JD2 H;  1JHW A;  3CJB G;  5KYN A;  2FF6 G;  5KYW A;  1D0N A;  1SVR A;  3EH2 A;  1QPV A;  1YVN G;  1P8Z G;  2L72 A; 
#chains in the Genus database with same CATH homology
 2MV2 A;  2VAC A;  1M4J A;  1J72 A;  2XFA A;  4KEE A;  5KYW B;  1WNJ A;  4CBX G;  3FFN A;  1NMD G;  1AHQ A;  3EGD A;  5HVK D;  1PD1 A;  5KYU A;  3TU5 B;  5KYY A;  1NLV G;  3Q2B A;  1D4X G;  2D8B A;  1T44 G;  1Q8X A;  5KYX B;  1COF A;  2MP4 A;  4KED A;  1HQZ 1;  2FH3 A;  3CI5 G;  5FAE A;  2FGH A;  4PKG G;  1NPH A;  2FF3 A;  2NUT B;  1KCQ A;  2MOT A;  1MDU A;  1WM4 A;  1EQY S;  1X67 A;  4Z94 G;  1ESV S;  5IVU A;  4PKH B;  3FG7 A;  4BEX 1;  2XF1 A;  5KYX A;  2W0I A;  1RGI G;  2FH1 A;  3EFO A;  3EG9 A;  1PD0 A;  2VIK A;  1M2O A;  3A5M S;  3EFO B;  1WFS A;  2NUT A;  3CJC G;  1M2V B;  3EG9 B;  2LJ8 A;  1AK6 A;  3EH1 A;  4PKI G;  2KVK A;  1TMW A;  1T3Y A;  2FH4 A;  1Q8G A;  4CBU G;  3DAW B;  1H1V G;  4LIZ A;  2HD7 A;  3CIP G;  1CFY A;  3A5O S;  2QTV A;  5HVK B;  3A5N S;  4CBW G;  5L6W C;  1C0G S;  1VKK A;  1T2L A;  4S10 C;  2FH2 A;  5DD2 A;  1NM1 G;  1CNU A;  3EGX B;  3FFK A;  3L50 A;  1DEJ S;  1M2V A;  1VFQ A;  1SVY A;  1T3X A;  4KEF A;  1TVJ A;  3FG6 A;  2VIL A;  5A1M A;  1F7S A;  2NUP A;  1V6F A;  1P8X A;  1AK7 A;  1SVQ A;  2LXX A;  5FAF A;  2LLF A;  2NUP B;  1PCX A;  3EGX A;  3A5L S;  1C0F S;  3EGD B;  3DA7 A;  1YAG G;  5KYU B;  1UDM A;  5KYY B;  2I2Q A;  4JD2 H;  1JHW A;  3CJB G;  5KYN A;  2FF6 G;  5KYW A;  1D0N A;  1SVR A;  3EH2 A;  1QPV A;  1YVN G;  1P8Z G;  2L72 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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