3FG6A

Structure of the c-terminus of adseverin
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
320
structure length
296
Chain Sequence
GKVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQIIYTWQGANATRDELTTSAFLTVQLDRSLGGQAVQIRVSQGKEPVHLLSLFKDKPLIIYPTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVLKCKTLRIQEGEEPEEFWNSLGGKKDYQTSPLLETQAEDHPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVEKKESLKSAKMYLTPIVIIKQGHEPPTFTGWFLGWDSSKW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Actin-binding protein
molecule keywords Adseverin
publication title The crystal structure of the C-terminus of adseverin reveals the actin-binding interface.
pubmed doi rcsb
source organism Homo sapiens
total genus 86
structure length 296
sequence length 320
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature
pdb deposition date 2008-12-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00626 Gelsolin Gelsolin repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 3fg6A03
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 3fg6A02
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 3fg6A01
1T3YA 1V6FA 3A5MS 4LIZA 1F7SA 4KEDA 1COFA 2D8BA 2LXXA 5A1MA 3EFOB 2NUTB 1YAGG 3EGXB 1AK7A 1H1VG 3Q2BA 3FG6A 5KYWA 1C0FS 1Q8XA 1PD1A 4Z94G 2FGHA 2MOTA 5KYXA 3EGXA 1HQZ1 2I2QA 3DAWB 1NM1G 1RGIG 2FF6G 3EG9A 4PKGG 1NMDG 4BEX1 2FH2A 1AK6A 2NUPA 5L6WC 3CI5G 1P8XA 1M4JA 1QPVA 2VILA 3CIPG 3EH1A 2FH3A 1SVYA 5FAEA 5KYUB 1KCQA 1D4XG 1TVJA 3A5NS 1YVNG 5KYYB 1MDUA 1CNUA 1T44G 3EFOA 4CBWG 4PKHB 1X67A 1C0GS 1M2OA 2VIKA 2MP4A 2NUTA 2MV2A 1P8ZG 1WFSA 2KVKA 2VACA 3EGDB 1T2LA 1PD0A 1NLVG 3FFNA 5KYNA 2LJ8A 2XFAA 1VKKA 4CBXG 1NPHA 1D0NA 2FH4A 3CJBG 1WNJA 5DD2A 4JD2H 2FF3A 5HVKB 1ESVS 4S10C 1DEJS 1SVRA 2FH1A 1J72A 1JHWA 1AHQA 5FAFA 1WM4A 5KYUA 4KEEA 3FFKA 5KYYA 3FG7A 2W0IA 1TMWA 1EQYS 1CFYA 4CBUG 3TU5B 5HVKD 3L50A 2XF1A 1SVQA 5IVUA 3EH2A 1VFQA 5KYWB 1T3XA 3A5LS 3A5OS 4PKIG 5KYXB 2L72A 1M2VB 3EGDA 4KEFA 2HD7A 3CJCG 1Q8GA 3EG9B 1M2VA 1UDMA 2LLFA 2QTVA 2NUPB 1PCXA
chains in the Genus database with same CATH superfamily
1T3YA 1V6FA 3A5MS 4LIZA 1F7SA 4KEDA 1COFA 2D8BA 3DA7A 2LXXA 5A1MA 3EFOB 2NUTB 1YAGG 3EGXB 1AK7A 1H1VG 3Q2BA 3FG6A 5KYWA 1C0FS 1Q8XA 1PD1A 4Z94G 2FGHA 2MOTA 5KYXA 3EGXA 1HQZ1 2I2QA 3DAWB 1NM1G 1RGIG 2FF6G 3EG9A 4PKGG 1NMDG 4BEX1 2FH2A 1AK6A 2NUPA 5L6WC 3CI5G 1P8XA 1M4JA 1QPVA 2VILA 3CIPG 3EH1A 2FH3A 1SVYA 5FAEA 5KYUB 1KCQA 1D4XG 1TVJA 3A5NS 1YVNG 5KYYB 1MDUA 1CNUA 1T44G 3EFOA 4CBWG 4PKHB 1X67A 1C0GS 1M2OA 2VIKA 2MP4A 2NUTA 2MV2A 1P8ZG 1WFSA 2KVKA 2VACA 3EGDB 1T2LA 1PD0A 1NLVG 3FFNA 5KYNA 2LJ8A 2XFAA 1VKKA 4CBXG 1NPHA 1D0NA 2FH4A 3CJBG 1WNJA 5DD2A 4JD2H 2FF3A 5HVKB 1ESVS 4S10C 1DEJS 1SVRA 2FH1A 1J72A 1JHWA 1AHQA 5FAFA 1WM4A 5KYUA 4KEEA 3FFKA 5KYYA 3FG7A 2W0IA 1TMWA 1EQYS 1CFYA 4CBUG 3TU5B 5HVKD 3L50A 2XF1A 1SVQA 5IVUA 3EH2A 1VFQA 5KYWB 1T3XA 3A5LS 3A5OS 4PKIG 5KYXB 2L72A 1M2VB 3EGDA 4KEFA 2HD7A 3CJCG 1Q8GA 3EG9B 1M2VA 1UDMA 2LLFA 2QTVA 2NUPB 1PCXA
chains in the Genus database with same CATH topology
1T3YA 1V6FA 3A5MS 4LIZA 1F7SA 4KEDA 1COFA 2D8BA 3DA7A 2LXXA 5A1MA 3EFOB 2NUTB 1YAGG 3EGXB 1AK7A 1H1VG 3Q2BA 3FG6A 5KYWA 1C0FS 1Q8XA 1PD1A 4Z94G 2FGHA 2MOTA 5KYXA 3EGXA 1HQZ1 2I2QA 3DAWB 1NM1G 1RGIG 2FF6G 3EG9A 4PKGG 1NMDG 4BEX1 2FH2A 1AK6A 2NUPA 5L6WC 3CI5G 1P8XA 1M4JA 1QPVA 2VILA 3CIPG 3EH1A 2FH3A 1SVYA 5FAEA 5KYUB 1KCQA 1D4XG 1TVJA 3A5NS 1YVNG 5KYYB 1MDUA 1CNUA 1T44G 3EFOA 4CBWG 4PKHB 1X67A 1C0GS 1M2OA 2VIKA 2MP4A 2NUTA 2MV2A 1P8ZG 1WFSA 2KVKA 2VACA 3EGDB 1T2LA 1PD0A 1NLVG 3FFNA 5KYNA 2LJ8A 2XFAA 1VKKA 4CBXG 1NPHA 1D0NA 2FH4A 3CJBG 1WNJA 5DD2A 4JD2H 2FF3A 5HVKB 1ESVS 4S10C 1DEJS 1SVRA 2FH1A 1J72A 1JHWA 1AHQA 5FAFA 1WM4A 5KYUA 4KEEA 3FFKA 5KYYA 3FG7A 2W0IA 1TMWA 1EQYS 1CFYA 4CBUG 3TU5B 5HVKD 3L50A 2XF1A 1SVQA 5IVUA 3EH2A 1VFQA 5KYWB 1T3XA 3A5LS 3A5OS 4PKIG 5KYXB 2L72A 1M2VB 3EGDA 4KEFA 2HD7A 3CJCG 1Q8GA 3EG9B 1M2VA 1UDMA 2LLFA 2QTVA 2NUPB 1PCXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T3Y A;  1V6F A;  3A5M S;  4LIZ A;  1F7S A;  4KED A;  1COF A;  2D8B A;  2LXX A;  5A1M A;  3EFO B;  2NUT B;  1YAG G;  3EGX B;  1AK7 A;  1H1V G;  3Q2B A;  3FG6 A;  5KYW A;  1C0F S;  1Q8X A;  1PD1 A;  4Z94 G;  2FGH A;  2MOT A;  5KYX A;  3EGX A;  1HQZ 1;  2I2Q A;  3DAW B;  1NM1 G;  1RGI G;  2FF6 G;  3EG9 A;  4PKG G;  1NMD G;  4BEX 1;  2FH2 A;  1AK6 A;  2NUP A;  5L6W C;  3CI5 G;  1P8X A;  1M4J A;  1QPV A;  2VIL A;  3CIP G;  3EH1 A;  2FH3 A;  1SVY A;  5FAE A;  5KYU B;  1KCQ A;  1D4X G;  1TVJ A;  3A5N S;  1YVN G;  5KYY B;  1MDU A;  1CNU A;  1T44 G;  3EFO A;  4CBW G;  4PKH B;  1X67 A;  1C0G S;  1M2O A;  2VIK A;  2MP4 A;  2NUT A;  2MV2 A;  1P8Z G;  1WFS A;  2KVK A;  2VAC A;  3EGD B;  1T2L A;  1PD0 A;  1NLV G;  3FFN A;  5KYN A;  2LJ8 A;  2XFA A;  1VKK A;  4CBX G;  1NPH A;  1D0N A;  2FH4 A;  3CJB G;  1WNJ A;  5DD2 A;  4JD2 H;  2FF3 A;  5HVK B;  1ESV S;  4S10 C;  1DEJ S;  1SVR A;  2FH1 A;  1J72 A;  1JHW A;  1AHQ A;  5FAF A;  1WM4 A;  5KYU A;  4KEE A;  3FFK A;  5KYY A;  3FG7 A;  2W0I A;  1TMW A;  1EQY S;  1CFY A;  4CBU G;  3TU5 B;  5HVK D;  3L50 A;  2XF1 A;  1SVQ A;  5IVU A;  3EH2 A;  1VFQ A;  5KYW B;  1T3X A;  3A5L S;  3A5O S;  4PKI G;  5KYX B;  2L72 A;  1M2V B;  3EGD A;  4KEF A;  2HD7 A;  3CJC G;  1Q8G A;  3EG9 B;  1M2V A;  1UDM A;  2LLF A;  2QTV A;  2NUP B;  1PCX A; 
#chains in the Genus database with same CATH topology
 1T3Y A;  1V6F A;  3A5M S;  4LIZ A;  1F7S A;  4KED A;  1COF A;  2D8B A;  3DA7 A;  2LXX A;  5A1M A;  3EFO B;  2NUT B;  1YAG G;  3EGX B;  1AK7 A;  1H1V G;  3Q2B A;  3FG6 A;  5KYW A;  1C0F S;  1Q8X A;  1PD1 A;  4Z94 G;  2FGH A;  2MOT A;  5KYX A;  3EGX A;  1HQZ 1;  2I2Q A;  3DAW B;  1NM1 G;  1RGI G;  2FF6 G;  3EG9 A;  4PKG G;  1NMD G;  4BEX 1;  2FH2 A;  1AK6 A;  2NUP A;  5L6W C;  3CI5 G;  1P8X A;  1M4J A;  1QPV A;  2VIL A;  3CIP G;  3EH1 A;  2FH3 A;  1SVY A;  5FAE A;  5KYU B;  1KCQ A;  1D4X G;  1TVJ A;  3A5N S;  1YVN G;  5KYY B;  1MDU A;  1CNU A;  1T44 G;  3EFO A;  4CBW G;  4PKH B;  1X67 A;  1C0G S;  1M2O A;  2VIK A;  2MP4 A;  2NUT A;  2MV2 A;  1P8Z G;  1WFS A;  2KVK A;  2VAC A;  3EGD B;  1T2L A;  1PD0 A;  1NLV G;  3FFN A;  5KYN A;  2LJ8 A;  2XFA A;  1VKK A;  4CBX G;  1NPH A;  1D0N A;  2FH4 A;  3CJB G;  1WNJ A;  5DD2 A;  4JD2 H;  2FF3 A;  5HVK B;  1ESV S;  4S10 C;  1DEJ S;  1SVR A;  2FH1 A;  1J72 A;  1JHW A;  1AHQ A;  5FAF A;  1WM4 A;  5KYU A;  4KEE A;  3FFK A;  5KYY A;  3FG7 A;  2W0I A;  1TMW A;  1EQY S;  1CFY A;  4CBU G;  3TU5 B;  5HVK D;  3L50 A;  2XF1 A;  1SVQ A;  5IVU A;  3EH2 A;  1VFQ A;  5KYW B;  1T3X A;  3A5L S;  3A5O S;  4PKI G;  5KYX B;  2L72 A;  1M2V B;  3EGD A;  4KEF A;  2HD7 A;  3CJC G;  1Q8G A;  3EG9 B;  1M2V A;  1UDM A;  2LLF A;  2QTV A;  2NUP B;  1PCX A; 
#chains in the Genus database with same CATH homology
 1T3Y A;  1V6F A;  3A5M S;  4LIZ A;  1F7S A;  4KED A;  1COF A;  2D8B A;  3DA7 A;  2LXX A;  5A1M A;  3EFO B;  2NUT B;  1YAG G;  3EGX B;  1AK7 A;  1H1V G;  3Q2B A;  3FG6 A;  5KYW A;  1C0F S;  1Q8X A;  1PD1 A;  4Z94 G;  2FGH A;  2MOT A;  5KYX A;  3EGX A;  1HQZ 1;  2I2Q A;  3DAW B;  1NM1 G;  1RGI G;  2FF6 G;  3EG9 A;  4PKG G;  1NMD G;  4BEX 1;  2FH2 A;  1AK6 A;  2NUP A;  5L6W C;  3CI5 G;  1P8X A;  1M4J A;  1QPV A;  2VIL A;  3CIP G;  3EH1 A;  2FH3 A;  1SVY A;  5FAE A;  5KYU B;  1KCQ A;  1D4X G;  1TVJ A;  3A5N S;  1YVN G;  5KYY B;  1MDU A;  1CNU A;  1T44 G;  3EFO A;  4CBW G;  4PKH B;  1X67 A;  1C0G S;  1M2O A;  2VIK A;  2MP4 A;  2NUT A;  2MV2 A;  1P8Z G;  1WFS A;  2KVK A;  2VAC A;  3EGD B;  1T2L A;  1PD0 A;  1NLV G;  3FFN A;  5KYN A;  2LJ8 A;  2XFA A;  1VKK A;  4CBX G;  1NPH A;  1D0N A;  2FH4 A;  3CJB G;  1WNJ A;  5DD2 A;  4JD2 H;  2FF3 A;  5HVK B;  1ESV S;  4S10 C;  1DEJ S;  1SVR A;  2FH1 A;  1J72 A;  1JHW A;  1AHQ A;  5FAF A;  1WM4 A;  5KYU A;  4KEE A;  3FFK A;  5KYY A;  3FG7 A;  2W0I A;  1TMW A;  1EQY S;  1CFY A;  4CBU G;  3TU5 B;  5HVK D;  3L50 A;  2XF1 A;  1SVQ A;  5IVU A;  3EH2 A;  1VFQ A;  5KYW B;  1T3X A;  3A5L S;  3A5O S;  4PKI G;  5KYX B;  2L72 A;  1M2V B;  3EGD A;  4KEF A;  2HD7 A;  3CJC G;  1Q8G A;  3EG9 B;  1M2V A;  1UDM A;  2LLF A;  2QTV A;  2NUP B;  1PCX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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