3FK0A

E. coli epsp synthase (tips mutation) liganded with s3p
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
427
structure length
427
Chain Sequence
MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGIAMRSLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
publication title Structural Basis of Glyphosate Resistance Resulting from the Double Mutation Thr97 -> Ile and Pro101 -> Ser in 5-Enolpyruvylshikimate-3-phosphate Synthase from Escherichia coli.
pubmed doi rcsb
source organism Escherichia coli k-12
total genus 158
structure length 427
sequence length 427
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2008-12-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3fk0A02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3fk0A01
1DLGA 5BUFA 3ZH4A 2O0BA 2O15A 2PQCA 2RL2A 2PQBA 4E7GA 2YVWA 1G6SA 2QFSA 3SG1A 2GG6A 5BS5A 4ZNDA 2AA9A 3SU9A 2GGAA 1P88A 3SLHA 1Q3GA 3KR6A 4R7UA 3NVSA 4EGRA 1EJCA 3LTHA 4E7CA 3SWEA 3FK1A 1MI4A 3TR1A 3SWQA 2O0ZA 1EJDA 3FK0A 2PQ9A 1NAWA 3KQAA 5BQ2A 4FQDA 1UAEA 3SWAA 2O0EA 2O0XA 2BJBA 1X8RA 3FJZA 3SWDA 3KQJA 2GG4A 1P89A 3ISSA 3FJXA 4E7BA 3R38A 1EYNA 2AAYA 1RF6A 4E7FA 1A2NA 2PQDA 3RMTA 4EIIA 2O0DA 2QFUA 3SPBA 3SWIA 2QFQA 3UPKA 2QFTA 1YBGA 3ZH3A 1RF5A 4E7EA 4GFPA 3ROIA 1X8TA 2Z2CA 5U4HA 1RF4A 4N3PA 3V4TA 1Q36A 2GGDA 3VCYA 3V5VA 2RL1A 3TI2A 1RYWA 4E7DA 1G6TA 3SWGA
chains in the Genus database with same CATH superfamily
1DLGA 5BUFA 3ZH4A 2O0BA 2O15A 2PQCA 2RL2A 3KGDA 2PQBA 4E7GA 2YVWA 1G6SA 2QFSA 3SG1A 2GG6A 5BS5A 1QMIA 4ZNDA 2AA9A 3SU9A 2GGAA 1P88A 3SLHA 1Q3GA 3KR6A 3TV1A 4R7UA 3NVSA 4EGRA 1EJCA 3LTHA 4E7CA 3SWEA 3FK1A 1MI4A 3TR1A 1QMHA 3SWQA 2O0ZA 4O89A 1EJDA 3FK0A 2PQ9A 1NAWA 3KQAA 5BQ2A 4FQDA 1UAEA 3SWAA 2O0EA 2O0XA 2BJBA 1X8RA 3FJZA 3SWDA 3KQJA 2GG4A 1P89A 3ISSA 3FJXA 4E7BA 3R38A 1EYNA 3TUTA 3PQVA 2AAYA 1RF6A 4E7FA 1A2NA 2PQDA 3RMTA 4EIIA 2O0DA 2QFUA 4CLQA 3SPBA 3SWIA 4O8JA 2QFQA 3UPKA 2QFTA 1YBGA 3ZH3A 1RF5A 4E7EA 3TUXA 4GFPA 3ROIA 1X8TA 2Z2CA 5U4HA 1RF4A 4N3PA 3V4TA 1Q36A 2GGDA 3VCYA 3V5VA 2RL1A 3TI2A 1RYWA 4E7DA 1G6TA 3SWGA 3TW3A
chains in the Genus database with same CATH topology
1DLGA 5BUFA 3ZH4A 2O0BA 2O15A 2PQCA 2RL2A 2PQBA 4E7GA 2YVWA 1G6SA 2QFSA 3SG1A 2GG6A 5BS5A 4ZNDA 2AA9A 3SU9A 2GGAA 1P88A 3SLHA 1Q3GA 3KR6A 4R7UA 3NVSA 4EGRA 1EJCA 3LTHA 4E7CA 3SWEA 3FK1A 1MI4A 3TR1A 3SWQA 2O0ZA 1EJDA 3FK0A 2PQ9A 1NAWA 3KQAA 5BQ2A 4FQDA 1UAEA 3SWAA 2O0EA 2O0XA 2BJBA 1X8RA 3FJZA 3SWDA 3KQJA 2GG4A 1P89A 3ISSA 3FJXA 4E7BA 3R38A 1EYNA 2AAYA 1RF6A 4E7FA 1A2NA 2PQDA 3RMTA 4EIIA 2O0DA 2QFUA 3SPBA 3SWIA 2QFQA 3UPKA 2QFTA 1YBGA 3ZH3A 1RF5A 4E7EA 4GFPA 3ROIA 1X8TA 2Z2CA 5U4HA 1RF4A 4N3PA 3V4TA 1Q36A 2GGDA 3VCYA 3V5VA 2RL1A 3TI2A 1RYWA 4E7DA 1G6TA 3SWGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DLG A;  5BUF A;  3ZH4 A;  2O0B A;  2O15 A;  2PQC A;  2RL2 A;  2PQB A;  4E7G A;  2YVW A;  1G6S A;  2QFS A;  3SG1 A;  2GG6 A;  5BS5 A;  4ZND A;  2AA9 A;  3SU9 A;  2GGA A;  1P88 A;  3SLH A;  1Q3G A;  3KR6 A;  4R7U A;  3NVS A;  4EGR A;  1EJC A;  3LTH A;  4E7C A;  3SWE A;  3FK1 A;  1MI4 A;  3TR1 A;  3SWQ A;  2O0Z A;  1EJD A;  3FK0 A;  2PQ9 A;  1NAW A;  3KQA A;  5BQ2 A;  4FQD A;  1UAE A;  3SWA A;  2O0E A;  2O0X A;  2BJB A;  1X8R A;  3FJZ A;  3SWD A;  3KQJ A;  2GG4 A;  1P89 A;  3ISS A;  3FJX A;  4E7B A;  3R38 A;  1EYN A;  2AAY A;  1RF6 A;  4E7F A;  1A2N A;  2PQD A;  3RMT A;  4EII A;  2O0D A;  2QFU A;  3SPB A;  3SWI A;  2QFQ A;  3UPK A;  2QFT A;  1YBG A;  3ZH3 A;  1RF5 A;  4E7E A;  4GFP A;  3ROI A;  1X8T A;  2Z2C A;  5U4H A;  1RF4 A;  4N3P A;  3V4T A;  1Q36 A;  2GGD A;  3VCY A;  3V5V A;  2RL1 A;  3TI2 A;  1RYW A;  4E7D A;  1G6T A;  3SWG A; 
#chains in the Genus database with same CATH topology
 1DLG A;  5BUF A;  3ZH4 A;  2O0B A;  2O15 A;  2PQC A;  2RL2 A;  3KGD A;  2PQB A;  4E7G A;  2YVW A;  1G6S A;  2QFS A;  3SG1 A;  2GG6 A;  5BS5 A;  1QMI A;  4ZND A;  2AA9 A;  3SU9 A;  2GGA A;  1P88 A;  3SLH A;  1Q3G A;  3KR6 A;  3TV1 A;  4R7U A;  3NVS A;  4EGR A;  1EJC A;  3LTH A;  4E7C A;  3SWE A;  3FK1 A;  1MI4 A;  3TR1 A;  1QMH A;  3SWQ A;  2O0Z A;  4O89 A;  1EJD A;  3FK0 A;  2PQ9 A;  1NAW A;  3KQA A;  5BQ2 A;  4FQD A;  1UAE A;  3SWA A;  2O0E A;  2O0X A;  2BJB A;  1X8R A;  3FJZ A;  3SWD A;  3KQJ A;  2GG4 A;  1P89 A;  3ISS A;  3FJX A;  4E7B A;  3R38 A;  1EYN A;  3TUT A;  3PQV A;  2AAY A;  1RF6 A;  4E7F A;  1A2N A;  2PQD A;  3RMT A;  4EII A;  2O0D A;  2QFU A;  4CLQ A;  3SPB A;  3SWI A;  4O8J A;  2QFQ A;  3UPK A;  2QFT A;  1YBG A;  3ZH3 A;  1RF5 A;  4E7E A;  3TUX A;  4GFP A;  3ROI A;  1X8T A;  2Z2C A;  5U4H A;  1RF4 A;  4N3P A;  3V4T A;  1Q36 A;  2GGD A;  3VCY A;  3V5V A;  2RL1 A;  3TI2 A;  1RYW A;  4E7D A;  1G6T A;  3SWG A;  3TW3 A; 
#chains in the Genus database with same CATH homology
 1DLG A;  5BUF A;  3ZH4 A;  2O0B A;  2O15 A;  2PQC A;  2RL2 A;  2PQB A;  4E7G A;  2YVW A;  1G6S A;  2QFS A;  3SG1 A;  2GG6 A;  5BS5 A;  4ZND A;  2AA9 A;  3SU9 A;  2GGA A;  1P88 A;  3SLH A;  1Q3G A;  3KR6 A;  4R7U A;  3NVS A;  4EGR A;  1EJC A;  3LTH A;  4E7C A;  3SWE A;  3FK1 A;  1MI4 A;  3TR1 A;  3SWQ A;  2O0Z A;  1EJD A;  3FK0 A;  2PQ9 A;  1NAW A;  3KQA A;  5BQ2 A;  4FQD A;  1UAE A;  3SWA A;  2O0E A;  2O0X A;  2BJB A;  1X8R A;  3FJZ A;  3SWD A;  3KQJ A;  2GG4 A;  1P89 A;  3ISS A;  3FJX A;  4E7B A;  3R38 A;  1EYN A;  2AAY A;  1RF6 A;  4E7F A;  1A2N A;  2PQD A;  3RMT A;  4EII A;  2O0D A;  2QFU A;  3SPB A;  3SWI A;  2QFQ A;  3UPK A;  2QFT A;  1YBG A;  3ZH3 A;  1RF5 A;  4E7E A;  4GFP A;  3ROI A;  1X8T A;  2Z2C A;  5U4H A;  1RF4 A;  4N3P A;  3V4T A;  1Q36 A;  2GGD A;  3VCY A;  3V5V A;  2RL1 A;  3TI2 A;  1RYW A;  4E7D A;  1G6T A;  3SWG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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