3FQ6A

The crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
114
structure length
114
Chain Sequence
NATAFVPALVASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYESPHRLLKTLTQFAEYFGTERQATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Methyltransferase
publication title The crystal structure of a methyltransferase domain from Bacteroides thetaiotaomicron VPI
rcsb
source organism Bacteroides thetaiotaomicron
total genus 26
structure length 114
sequence length 114
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-01-07
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 3fq6A00
2E0NA 2DV7A 2OWUA 2HUTA 2P5CA 2YBOA 2HUXA 2EL1A 2ZVCA 2PB6A 2EN5A 3ND1A 2DV3A 1S4DA 2CBFA 2DXVA 2P6IA 2PCHA 3I4TA 2OWFA 2DSHA 2PCIA 3NUTA 2DXXA 2PB5A 2HUQA 2EJKA 2PCGA 2EK3A 2P5FA 2HUVA 2P2XA 2E17A 2YBQA 2DV4A 1VE2A 2EL0A 2ELEA 1WNGA 2EEQA 1CBFA 2PCKA 2DV5A 2E8HA 2E16A 2DXWA 2E0KA 2E15A 2EMUA 2OWKA 2EMRA 2ED3A 2E7RA 4E16A 2E8QA 1VA0A 2OWVA 2EGSA 2E07A 2EL2A 2EJJA 2ZVBA 2Z6RA 2EHLA 5HW4A 2EH4A 2EGBA 1V9AA 2E8SA 2ED5A 2OWGA 3NDCA 2E4RA 2E8RA 1PJSA 1WDEA 2DEKA 2DSGA 2EH5A 2QBUA 1PJQA 2EH2A 3NEIA 2E08A 3KWPA 2NPNA 2PCAA 2ELDA 2P6DA 2EGLA 2PCMA 2EJZA 2P9DA 2EL3A 2DSIA 2BB3A 1VHVA 2P6KA 3FQ6A 2HR8A 2EKAA 2EK4A 2P6LA 2EHCA 3FFYA 1WYZA 1PJTA 2EK2A 2PB4A 2E4NA 2ENIA 1VCEA 2EK7A
chains in the Genus database with same CATH superfamily
2E0NA 2DV7A 2OWUA 2HUTA 2P5CA 2YBOA 2HUXA 2EL1A 2ZVCA 2PB6A 2EN5A 3ND1A 2DV3A 1S4DA 2CBFA 2DXVA 2P6IA 2PCHA 3I4TA 2OWFA 2DSHA 2PCIA 3NUTA 2DXXA 2PB5A 2HUQA 2EJKA 2PCGA 2EK3A 2P5FA 2HUVA 2P2XA 2E17A 2YBQA 2DV4A 1VE2A 2EL0A 2ELEA 1WNGA 2EEQA 1CBFA 2PCKA 2KYYA 2DV5A 2E8HA 2E16A 2DXWA 2E0KA 2E15A 2EMUA 2OWKA 2EMRA 2ED3A 2E7RA 4E16A 2E8QA 1VA0A 2OWVA 2EGSA 2E07A 2EL2A 2EJJA 2ZVBA 2Z6RA 2EHLA 5HW4A 2EH4A 2EGBA 1V9AA 2E8SA 2ED5A 2OWGA 3NDCA 2E4RA 2E8RA 1PJSA 1WDEA 2DEKA 2DSGA 2EH5A 2QBUA 1PJQA 2EH2A 3LMMA 3NEIA 2E08A 3KWPA 2NPNA 2PCAA 2ELDA 2P6DA 2EGLA 2PCMA 2EJZA 2P9DA 2EL3A 2DSIA 2BB3A 1VHVA 2P6KA 3FQ6A 2HR8A 2EKAA 2EK4A 2P6LA 2EHCA 3FFYA 1WYZA 1PJTA 2EK2A 2PB4A 2E4NA 2ENIA 1VCEA 2EK7A
chains in the Genus database with same CATH topology
2E0NA 2DV7A 2OWUA 2HUTA 2P5CA 2YBOA 2HUXA 2EL1A 2ZVCA 2PB6A 2EN5A 3ND1A 2DV3A 1S4DA 2CBFA 2DXVA 2P6IA 2PCHA 3I4TA 2OWFA 2DSHA 2PCIA 3NUTA 2DXXA 2PB5A 2HUQA 2EJKA 2PCGA 2EK3A 2P5FA 2HUVA 2P2XA 2E17A 2YBQA 2DV4A 1VE2A 2EL0A 2ELEA 1WNGA 2EEQA 1CBFA 2PCKA 2KYYA 2DV5A 2E8HA 2E16A 2DXWA 2E0KA 2E15A 2EMUA 2OWKA 2EMRA 2ED3A 2E7RA 4E16A 2E8QA 1VA0A 2OWVA 2EGSA 2E07A 2EL2A 2EJJA 2ZVBA 2Z6RA 2EHLA 5HW4A 2EH4A 2EGBA 1V9AA 2E8SA 2ED5A 2OWGA 3NDCA 2E4RA 2E8RA 1PJSA 1WDEA 2DEKA 2DSGA 2EH5A 2QBUA 1PJQA 2EH2A 3LMMA 3NEIA 2E08A 3KWPA 2NPNA 2PCAA 2ELDA 2P6DA 2EGLA 2PCMA 2EJZA 2P9DA 2EL3A 2DSIA 2BB3A 1VHVA 2P6KA 3FQ6A 2HR8A 2EKAA 2EK4A 2P6LA 2EHCA 3FFYA 1WYZA 1PJTA 2EK2A 2PB4A 2E4NA 2ENIA 1VCEA 2EK7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2E0N A;  2DV7 A;  2OWU A;  2HUT A;  2P5C A;  2YBO A;  2HUX A;  2EL1 A;  2ZVC A;  2PB6 A;  2EN5 A;  3ND1 A;  2DV3 A;  1S4D A;  2CBF A;  2DXV A;  2P6I A;  2PCH A;  3I4T A;  2OWF A;  2DSH A;  2PCI A;  3NUT A;  2DXX A;  2PB5 A;  2HUQ A;  2EJK A;  2PCG A;  2EK3 A;  2P5F A;  2HUV A;  2P2X A;  2E17 A;  2YBQ A;  2DV4 A;  1VE2 A;  2EL0 A;  2ELE A;  1WNG A;  2EEQ A;  1CBF A;  2PCK A;  2DV5 A;  2E8H A;  2E16 A;  2DXW A;  2E0K A;  2E15 A;  2EMU A;  2OWK A;  2EMR A;  2ED3 A;  2E7R A;  4E16 A;  2E8Q A;  1VA0 A;  2OWV A;  2EGS A;  2E07 A;  2EL2 A;  2EJJ A;  2ZVB A;  2Z6R A;  2EHL A;  5HW4 A;  2EH4 A;  2EGB A;  1V9A A;  2E8S A;  2ED5 A;  2OWG A;  3NDC A;  2E4R A;  2E8R A;  1PJS A;  1WDE A;  2DEK A;  2DSG A;  2EH5 A;  2QBU A;  1PJQ A;  2EH2 A;  3NEI A;  2E08 A;  3KWP A;  2NPN A;  2PCA A;  2ELD A;  2P6D A;  2EGL A;  2PCM A;  2EJZ A;  2P9D A;  2EL3 A;  2DSI A;  2BB3 A;  1VHV A;  2P6K A;  3FQ6 A;  2HR8 A;  2EKA A;  2EK4 A;  2P6L A;  2EHC A;  3FFY A;  1WYZ A;  1PJT A;  2EK2 A;  2PB4 A;  2E4N A;  2ENI A;  1VCE A;  2EK7 A; 
#chains in the Genus database with same CATH topology
 2E0N A;  2DV7 A;  2OWU A;  2HUT A;  2P5C A;  2YBO A;  2HUX A;  2EL1 A;  2ZVC A;  2PB6 A;  2EN5 A;  3ND1 A;  2DV3 A;  1S4D A;  2CBF A;  2DXV A;  2P6I A;  2PCH A;  3I4T A;  2OWF A;  2DSH A;  2PCI A;  3NUT A;  2DXX A;  2PB5 A;  2HUQ A;  2EJK A;  2PCG A;  2EK3 A;  2P5F A;  2HUV A;  2P2X A;  2E17 A;  2YBQ A;  2DV4 A;  1VE2 A;  2EL0 A;  2ELE A;  1WNG A;  2EEQ A;  1CBF A;  2PCK A;  2KYY A;  2DV5 A;  2E8H A;  2E16 A;  2DXW A;  2E0K A;  2E15 A;  2EMU A;  2OWK A;  2EMR A;  2ED3 A;  2E7R A;  4E16 A;  2E8Q A;  1VA0 A;  2OWV A;  2EGS A;  2E07 A;  2EL2 A;  2EJJ A;  2ZVB A;  2Z6R A;  2EHL A;  5HW4 A;  2EH4 A;  2EGB A;  1V9A A;  2E8S A;  2ED5 A;  2OWG A;  3NDC A;  2E4R A;  2E8R A;  1PJS A;  1WDE A;  2DEK A;  2DSG A;  2EH5 A;  2QBU A;  1PJQ A;  2EH2 A;  3LMM A;  3NEI A;  2E08 A;  3KWP A;  2NPN A;  2PCA A;  2ELD A;  2P6D A;  2EGL A;  2PCM A;  2EJZ A;  2P9D A;  2EL3 A;  2DSI A;  2BB3 A;  1VHV A;  2P6K A;  3FQ6 A;  2HR8 A;  2EKA A;  2EK4 A;  2P6L A;  2EHC A;  3FFY A;  1WYZ A;  1PJT A;  2EK2 A;  2PB4 A;  2E4N A;  2ENI A;  1VCE A;  2EK7 A; 
#chains in the Genus database with same CATH homology
 2E0N A;  2DV7 A;  2OWU A;  2HUT A;  2P5C A;  2YBO A;  2HUX A;  2EL1 A;  2ZVC A;  2PB6 A;  2EN5 A;  3ND1 A;  2DV3 A;  1S4D A;  2CBF A;  2DXV A;  2P6I A;  2PCH A;  3I4T A;  2OWF A;  2DSH A;  2PCI A;  3NUT A;  2DXX A;  2PB5 A;  2HUQ A;  2EJK A;  2PCG A;  2EK3 A;  2P5F A;  2HUV A;  2P2X A;  2E17 A;  2YBQ A;  2DV4 A;  1VE2 A;  2EL0 A;  2ELE A;  1WNG A;  2EEQ A;  1CBF A;  2PCK A;  2KYY A;  2DV5 A;  2E8H A;  2E16 A;  2DXW A;  2E0K A;  2E15 A;  2EMU A;  2OWK A;  2EMR A;  2ED3 A;  2E7R A;  4E16 A;  2E8Q A;  1VA0 A;  2OWV A;  2EGS A;  2E07 A;  2EL2 A;  2EJJ A;  2ZVB A;  2Z6R A;  2EHL A;  5HW4 A;  2EH4 A;  2EGB A;  1V9A A;  2E8S A;  2ED5 A;  2OWG A;  3NDC A;  2E4R A;  2E8R A;  1PJS A;  1WDE A;  2DEK A;  2DSG A;  2EH5 A;  2QBU A;  1PJQ A;  2EH2 A;  3LMM A;  3NEI A;  2E08 A;  3KWP A;  2NPN A;  2PCA A;  2ELD A;  2P6D A;  2EGL A;  2PCM A;  2EJZ A;  2P9D A;  2EL3 A;  2DSI A;  2BB3 A;  1VHV A;  2P6K A;  3FQ6 A;  2HR8 A;  2EKA A;  2EK4 A;  2P6L A;  2EHC A;  3FFY A;  1WYZ A;  1PJT A;  2EK2 A;  2PB4 A;  2E4N A;  2ENI A;  1VCE A;  2EK7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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