3FWBC

Sac3:sus1:cdc31 complex
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
90
structure length
90
Chain Sequence
AQLKSQIQQYLVESGNYELISNELKARLLQEGWVDKVKDLTKSEMNINESTNFTQILSTVEPKALEMVSDSTRETVLKQIREFLEEIVDT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell cycle, transcription
molecule keywords Cell division control protein 31
publication title Sus1, Cdc31, and the Sac3 CID region form a conserved interaction platform that promotes nuclear pore association and mRNA export.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
total genus 34
structure length 90
sequence length 90
ec nomenclature
pdb deposition date 2009-01-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF10163 EnY2 Transcription factor e(y)2
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.140 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3fwbC00
3MHHB 4W4UB 4WA6B 3FWCC 3KIKA 4FIPB 4ZUXV 4FJCB 4C31B 3KJLA 4MBEC 4FK5B 4DHXB 3FWBC 3M99C 3MHSB
chains in the Genus database with same CATH superfamily
5DQFA 3B9LA 5B5TA 4W4UB 2VUEA 4LUHA 3NVKA 5GHKA 1MUSA 2BXHA 4OTTA 3ICXA 3UIVA 4ZBRA 4EMXA 1H9ZA 3FWCC 1NT2B 5GIPA 2YDFA 3ECPA 4E99A 1FOUA 4LA0A 4K71A 5IJEA 1GNIA 1MIVA 3MHSB 1KDXA 4ZCGA 2GUTA 2QHBA 4DM0A 4J2VA 5IIXA 5IIHA 1KXPD 1E7AA 4LB9A 2BXGA 2DG5A 3B9MA 4OT2A 3A73A 1TF0A 3CX9A 1E7EA 4GDXA 4LUFA 4GG2A 4N0FD 1HK4A 2DBWA 2CKXA 4DHXB 4TQ0A 2Z8JA 2DBUA 2Z8IA 3GA9L 2BXDA 4HGKA 1VZSA 2KBZA 3NVIA 3W1SA 1BKEA 3TDLA 4F5SA 2BX8A 2XVWA 4ZBQA 2LXSA 3SIUB 2BXLA 4Z69A 4GDLB 1E7CA 4ZUXV 3H37A 1HK5A 3LU6A 4JK4A 1TXUA 2LXTA 2BXEA 3H3AA 2NQOA 1VFIA 1E7BA 1O9XA 2EFEA 1JNBA 2LQHA 2XVQA 2XVVA 1J78A 2Z8KA 2I30A 1BM0A 4FK5B 4N3ZA 4TQ1A 3A75A 4ZBKA 5IFOA 2BXCA 2DYMA 2BXQA 2BXBA 2XW0A 2BXPA 4IW2A 3SIVB 3JQZA 1MIYA 2QMCA 4OTUA 2BXKA 2AGHB 2OT3A 3KJLA 3G9KD 1N5UA 2XMOA 4K2CA 3M99C 2EFDA 3V08A 2BXAA 4PO0A 4L8UA 1HA2A 4D7XA 4F5TA 4OR0A 2BXFA 2E0YA 3V09A 5BPKA 5IJ5A 2JUHA 3PLAA 2EFCA 1E78A 3WHSA 1E7FA 1MA9A 4M70B 2XW1A 2XSIA 4I9OA 5GINA 4G01A 2V36A 1MM8A 2K0NA 3VQIA 1AO6A 4L9QA 1LOTA 2XVUA 4BKEA 3LU8A 4S1YA 4HGMB 1J7EA 2NNWA 2QM6A 3GQXA 3NVMA 4L9KA 1LNSA 4BY9C 2DYOA 4FIPB 1MUHA 3V03A 2BXIA 4F5VA 1KW2A 3FWBC 1UORA 3JRYA 5FUOA 5ID9A 2OZBB 3LU7A 1GNJA 2AJEA 2LOQA 2VDBA 4MBEC 1E7HA 2BXOA 5D7GA 4F5UA 3NMUA 3WHRA 1HK1A 4N0UD 1BJ5A 3WHQA 2EFHA 5IJFA 1H5WA 1HK3A 1MIWA 2E0XA 4FJCB 4G04A 2BXNA 1E7GA 4LB2A 2I2ZA 2KWFA 2VUFA 4GDKB 2ROHA 5IIUA 3BPJA 1IJGA 4NAWB 1HK2A 5ID7A 2BXMA 4WA6B 4IW1A 3GQUA 3MHHB 2DBXA 2LQIA 4G03A 3KIKA 3SQJA 1E7IA 4ZC6A 5HOZA 5DBYA 5GIOA 4C31B 3FNMA 1SB0A 4Z9OA
chains in the Genus database with same CATH topology
5DQFA 3B9LA 5B5TA 4W4UB 2VUEA 4LUHA 3NVKA 5GHKA 2BXHA 4OTTA 3ICXA 3UIVA 4ZBRA 4EMXA 1H9ZA 3FWCC 1NT2B 5GIPA 2YDFA 4E99A 1FOUA 4LA0A 4K71A 5IJEA 1GNIA 1MIVA 3MHSB 4ZCGA 2QHBA 4J2VA 5IIXA 5IIHA 1KXPD 1E7AA 4LB9A 2BXGA 2DG5A 3B9MA 4OT2A 3A73A 1TF0A 3CX9A 1E7EA 4GDXA 4LUFA 4GG2A 4N0FD 1HK4A 2DBWA 2CKXA 4DHXB 4TQ0A 2Z8JA 2DBUA 2Z8IA 3GA9L 2BXDA 4HGKA 1VZSA 2KBZA 3NVIA 3W1SA 1BKEA 3TDLA 4F5SA 2BX8A 2XVWA 4ZBQA 3SIUB 2BXLA 4Z69A 4GDLB 1E7CA 4ZUXV 3H37A 1HK5A 3LU6A 4JK4A 1TXUA 2BXEA 3H3AA 2NQOA 1VFIA 1E7BA 1O9XA 2EFEA 1JNBA 2XVQA 2XVVA 2Z8KA 1J78A 4N3ZA 2I30A 1BM0A 4FK5B 4TQ1A 3A75A 4ZBKA 5IFOA 2BXCA 2DYMA 2BXQA 2BXBA 2XW0A 2BXPA 4IW2A 3SIVB 3JQZA 1MIYA 2QMCA 4OTUA 2BXKA 2OT3A 3KJLA 3G9KD 1N5UA 2XMOA 4K2CA 3M99C 2EFDA 3V08A 2BXAA 4PO0A 4L8UA 1HA2A 4F5TA 4OR0A 2BXFA 2E0YA 3V09A 5BPKA 5IJ5A 2JUHA 3PLAA 2EFCA 1E78A 3WHSA 1E7FA 1MA9A 4M70B 2XW1A 2XSIA 5GINA 4G01A 2V36A 3VQIA 1AO6A 4L9QA 1LOTA 2XVUA 4BKEA 3LU8A 4S1YA 4HGMB 1J7EA 2NNWA 2QM6A 3GQXA 3NVMA 4L9KA 1LNSA 4BY9C 2DYOA 4FIPB 3V03A 2BXIA 4F5VA 1KW2A 3FWBC 1UORA 3JRYA 5FUOA 5ID9A 2OZBB 3LU7A 1GNJA 2AJEA 2LOQA 2VDBA 4MBEC 1E7HA 2BXOA 5D7GA 4F5UA 3NMUA 3WHRA 1HK1A 4N0UD 1BJ5A 3WHQA 2EFHA 5IJFA 1H5WA 1HK3A 1MIWA 2E0XA 4FJCB 4G04A 2BXNA 1E7GA 4LB2A 2I2ZA 2VUFA 4GDKB 2ROHA 5IIUA 1IJGA 4NAWB 1HK2A 5ID7A 2BXMA 4WA6B 4IW1A 3GQUA 3MHHB 2DBXA 4G03A 3SQJA 3KIKA 1E7IA 4ZC6A 5HOZA 5DBYA 5GIOA 4C31B 3FNMA 4Z9OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3MHH B;  4W4U B;  4WA6 B;  3FWC C;  3KIK A;  4FIP B;  4ZUX V;  4FJC B;  4C31 B;  3KJL A;  4MBE C;  4FK5 B;  4DHX B;  3FWB C;  3M99 C;  3MHS B; 
#chains in the Genus database with same CATH topology
 5DQF A;  3B9L A;  5B5T A;  4W4U B;  2VUE A;  4LUH A;  3NVK A;  5GHK A;  1MUS A;  2BXH A;  4OTT A;  3ICX A;  3UIV A;  4ZBR A;  4EMX A;  1H9Z A;  3FWC C;  1NT2 B;  5GIP A;  2YDF A;  3ECP A;  4E99 A;  1FOU A;  4LA0 A;  4K71 A;  5IJE A;  1GNI A;  1MIV A;  3MHS B;  1KDX A;  4ZCG A;  2GUT A;  2QHB A;  4DM0 A;  4J2V A;  5IIX A;  5IIH A;  1KXP D;  1E7A A;  4LB9 A;  2BXG A;  2DG5 A;  3B9M A;  4OT2 A;  3A73 A;  1TF0 A;  3CX9 A;  1E7E A;  4GDX A;  4LUF A;  4GG2 A;  4N0F D;  1HK4 A;  2DBW A;  2CKX A;  4DHX B;  4TQ0 A;  2Z8J A;  2DBU A;  2Z8I A;  3GA9 L;  2BXD A;  4HGK A;  1VZS A;  2KBZ A;  3NVI A;  3W1S A;  1BKE A;  3TDL A;  4F5S A;  2BX8 A;  2XVW A;  4ZBQ A;  2LXS A;  3SIU B;  2BXL A;  4Z69 A;  4GDL B;  1E7C A;  4ZUX V;  3H37 A;  1HK5 A;  3LU6 A;  4JK4 A;  1TXU A;  2LXT A;  2BXE A;  3H3A A;  2NQO A;  1VFI A;  1E7B A;  1O9X A;  2EFE A;  1JNB A;  2LQH A;  2XVQ A;  2XVV A;  1J78 A;  2Z8K A;  2I30 A;  1BM0 A;  4FK5 B;  4N3Z A;  4TQ1 A;  3A75 A;  4ZBK A;  5IFO A;  2BXC A;  2DYM A;  2BXQ A;  2BXB A;  2XW0 A;  2BXP A;  4IW2 A;  3SIV B;  3JQZ A;  1MIY A;  2QMC A;  4OTU A;  2BXK A;  2AGH B;  2OT3 A;  3KJL A;  3G9K D;  1N5U A;  2XMO A;  4K2C A;  3M99 C;  2EFD A;  3V08 A;  2BXA A;  4PO0 A;  4L8U A;  1HA2 A;  4D7X A;  4F5T A;  4OR0 A;  2BXF A;  2E0Y A;  3V09 A;  5BPK A;  5IJ5 A;  2JUH A;  3PLA A;  2EFC A;  1E78 A;  3WHS A;  1E7F A;  1MA9 A;  4M70 B;  2XW1 A;  2XSI A;  4I9O A;  5GIN A;  4G01 A;  2V36 A;  1MM8 A;  2K0N A;  3VQI A;  1AO6 A;  4L9Q A;  1LOT A;  2XVU A;  4BKE A;  3LU8 A;  4S1Y A;  4HGM B;  1J7E A;  2NNW A;  2QM6 A;  3GQX A;  3NVM A;  4L9K A;  1LNS A;  4BY9 C;  2DYO A;  4FIP B;  1MUH A;  3V03 A;  2BXI A;  4F5V A;  1KW2 A;  3FWB C;  1UOR A;  3JRY A;  5FUO A;  5ID9 A;  2OZB B;  3LU7 A;  1GNJ A;  2AJE A;  2LOQ A;  2VDB A;  4MBE C;  1E7H A;  2BXO A;  5D7G A;  4F5U A;  3NMU A;  3WHR A;  1HK1 A;  4N0U D;  1BJ5 A;  3WHQ A;  2EFH A;  5IJF A;  1H5W A;  1HK3 A;  1MIW A;  2E0X A;  4FJC B;  4G04 A;  2BXN A;  1E7G A;  4LB2 A;  2I2Z A;  2KWF A;  2VUF A;  4GDK B;  2ROH A;  5IIU A;  3BPJ A;  1IJG A;  4NAW B;  1HK2 A;  5ID7 A;  2BXM A;  4WA6 B;  4IW1 A;  3GQU A;  3MHH B;  2DBX A;  2LQI A;  4G03 A;  3KIK A;  3SQJ A;  1E7I A;  4ZC6 A;  5HOZ A;  5DBY A;  5GIO A;  4C31 B;  3FNM A;  1SB0 A;  4Z9O A; 
#chains in the Genus database with same CATH homology
 5DQF A;  3B9L A;  5B5T A;  4W4U B;  2VUE A;  4LUH A;  3NVK A;  5GHK A;  2BXH A;  4OTT A;  3ICX A;  3UIV A;  4ZBR A;  4EMX A;  1H9Z A;  3FWC C;  1NT2 B;  5GIP A;  2YDF A;  4E99 A;  1FOU A;  4LA0 A;  4K71 A;  5IJE A;  1GNI A;  1MIV A;  3MHS B;  4ZCG A;  2QHB A;  4J2V A;  5IIX A;  5IIH A;  1KXP D;  1E7A A;  4LB9 A;  2BXG A;  2DG5 A;  3B9M A;  4OT2 A;  3A73 A;  1TF0 A;  3CX9 A;  1E7E A;  4GDX A;  4LUF A;  4GG2 A;  4N0F D;  1HK4 A;  2DBW A;  2CKX A;  4DHX B;  4TQ0 A;  2Z8J A;  2DBU A;  2Z8I A;  3GA9 L;  2BXD A;  4HGK A;  1VZS A;  2KBZ A;  3NVI A;  3W1S A;  1BKE A;  3TDL A;  4F5S A;  2BX8 A;  2XVW A;  4ZBQ A;  3SIU B;  2BXL A;  4Z69 A;  4GDL B;  1E7C A;  4ZUX V;  3H37 A;  1HK5 A;  3LU6 A;  4JK4 A;  1TXU A;  2BXE A;  3H3A A;  2NQO A;  1VFI A;  1E7B A;  1O9X A;  2EFE A;  1JNB A;  2XVQ A;  2XVV A;  2Z8K A;  1J78 A;  4N3Z A;  2I30 A;  1BM0 A;  4FK5 B;  4TQ1 A;  3A75 A;  4ZBK A;  5IFO A;  2BXC A;  2DYM A;  2BXQ A;  2BXB A;  2XW0 A;  2BXP A;  4IW2 A;  3SIV B;  3JQZ A;  1MIY A;  2QMC A;  4OTU A;  2BXK A;  2OT3 A;  3KJL A;  3G9K D;  1N5U A;  2XMO A;  4K2C A;  3M99 C;  2EFD A;  3V08 A;  2BXA A;  4PO0 A;  4L8U A;  1HA2 A;  4F5T A;  4OR0 A;  2BXF A;  2E0Y A;  3V09 A;  5BPK A;  5IJ5 A;  2JUH A;  3PLA A;  2EFC A;  1E78 A;  3WHS A;  1E7F A;  1MA9 A;  4M70 B;  2XW1 A;  2XSI A;  5GIN A;  4G01 A;  2V36 A;  3VQI A;  1AO6 A;  4L9Q A;  1LOT A;  2XVU A;  4BKE A;  3LU8 A;  4S1Y A;  4HGM B;  1J7E A;  2NNW A;  2QM6 A;  3GQX A;  3NVM A;  4L9K A;  1LNS A;  4BY9 C;  2DYO A;  4FIP B;  3V03 A;  2BXI A;  4F5V A;  1KW2 A;  3FWB C;  1UOR A;  3JRY A;  5FUO A;  5ID9 A;  2OZB B;  3LU7 A;  1GNJ A;  2AJE A;  2LOQ A;  2VDB A;  4MBE C;  1E7H A;  2BXO A;  5D7G A;  4F5U A;  3NMU A;  3WHR A;  1HK1 A;  4N0U D;  1BJ5 A;  3WHQ A;  2EFH A;  5IJF A;  1H5W A;  1HK3 A;  1MIW A;  2E0X A;  4FJC B;  4G04 A;  2BXN A;  1E7G A;  4LB2 A;  2I2Z A;  2VUF A;  4GDK B;  2ROH A;  5IIU A;  1IJG A;  4NAW B;  1HK2 A;  5ID7 A;  2BXM A;  4WA6 B;  4IW1 A;  3GQU A;  3MHH B;  2DBX A;  4G03 A;  3SQJ A;  3KIK A;  1E7I A;  4ZC6 A;  5HOZ A;  5DBY A;  5GIO A;  4C31 B;  3FNM A;  4Z9O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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