3FWRA

Crystal structure of the cbs domains from the bacillus subtilis ccpn repressor complexed with adp
Total Genus 44
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
145
structure length
145
Chain Sequence
TQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSLSENEIL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transcription
molecule keywords YqzB protein
publication title Ligand recognition by the energy sensor domain of the CcpN repressor
rcsb
source organism Bacillus subtilis
total genus 44
structure length 145
sequence length 145
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00571 CBS CBS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.580.10 Alpha Beta Roll CBS-domain CBS-domain 3fwrA00
4IY2A 2NYCA 3OCMA 4IYSA 2OUXA 3KXRA 5K24C 5IIPA 4NOCA 5LXQA 4FXSA 3FNAA 3PC2A 2RC3A 2YZIA 3L31A 2QH1A 4ESYA 3ORGA 3FHMA 4DQWA 3LFZA 4FRYA 2PFIA 2NYEA 3LHHA 2EMQA 4L27A 4GQVA 2OOYE 4L3VA 3KPDA 4IY0A 4COOA 2O16A 2EF7A 3KPBA 1PBJA 4GQYA 1Y5HA 4IY3A 3SL7A 5MMZA 3K6EA 4P1GA 4GQWA 5KS7A 5K25C 3TDHC 2QRCE 2ZY9A 3OCOA 4HG0A 2UV5A 3TE5C 2RIHA 2YVZA 3T4NC 1YAVA 3HF7A 3PC3A 3K2VA 2RIFA 4P1OA 4UUUA 4IY4A 3KPCA 3OI8A 2OOXE 1PVMA 4O9KA 2P9MA 3GBYA 2QLVC 2QRDE 3LV9A 2UV7A 2YZQA 2YVXA 2YVYA 2D4ZA 3I8NA 4PCUA 4ESYB 3FV6A 2UV6A 4L0DA 2UV4A 3L2BA 5K23C 4L28A 3KH5A 1XKFA 1O50A 3LQNA 5K22B 3FWRA 3FWSA 2QREE 3DDJA 3PC4A 2QR1E
chains in the Genus database with same CATH superfamily
4IY2A 2NYCA 3OCMA 4IYSA 2OUXA 3KXRA 5K24C 5IIPA 4NOCA 5LXQA 4FXSA 3FNAA 3PC2A 2RC3A 2YZIA 3L31A 2QH1A 4ESYA 3ORGA 3FHMA 4DQWA 3LFZA 4FRYA 2PFIA 2NYEA 3LHHA 2EMQA 2JA3A 4L27A 4GQVA 2OOYE 4L3VA 3KPDA 4IY0A 4COOA 2O16A 2EF7A 3KPBA 1PBJA 4GQYA 1Y5HA 4IY3A 3SL7A 5MMZA 3K6EA 4P1GA 4GQWA 5KS7A 5K25C 3TDHC 2QRCE 2ZY9A 3OCOA 4HG0A 2UV5A 3TE5C 2RIHA 2YVZA 3T4NC 1YAVA 3HF7A 3PC3A 3K2VA 2RIFA 4P1OA 4UUUA 4IY4A 3KPCA 3OI8A 2OOXE 1PVMA 4O9KA 2P9MA 3GBYA 2QLVC 2QRDE 3LV9A 2UV7A 2YZQA 2YVXA 2YVYA 2D4ZA 3I8NA 4PCUA 4ESYB 3FV6A 2J9LA 2UV6A 4L0DA 2UV4A 3L2BA 5K23C 4L28A 3KH5A 1XKFA 1O50A 3LQNA 5K22B 3FWRA 3FWSA 2QREE 3DDJA 3PC4A 2QR1E
chains in the Genus database with same CATH topology
4IY2A 2NYCA 3OCMA 4IYSA 2OUXA 3KXRA 5K24C 5IIPA 4NOCA 5LXQA 4FXSA 3FNAA 3PC2A 2RC3A 2YZIA 3L31A 2QH1A 4ESYA 3ORGA 3FHMA 4DQWA 3LFZA 4FRYA 2PFIA 2NYEA 3LHHA 2EMQA 2JA3A 4L27A 4GQVA 2OOYE 4L3VA 3KPDA 4IY0A 4COOA 2O16A 2EF7A 3KPBA 1PBJA 4GQYA 1Y5HA 4IY3A 3SL7A 5MMZA 3K6EA 4P1GA 4GQWA 5KS7A 5K25C 3TDHC 2QRCE 2ZY9A 3OCOA 4HG0A 2UV5A 3TE5C 2RIHA 2YVZA 3T4NC 1YAVA 3HF7A 3PC3A 3K2VA 2RIFA 4P1OA 4UUUA 4IY4A 3KPCA 3OI8A 2OOXE 1PVMA 4O9KA 2P9MA 3GBYA 2QLVC 2QRDE 3LV9A 2UV7A 2YZQA 2YVXA 2YVYA 2D4ZA 3I8NA 4PCUA 4ESYB 3FV6A 2J9LA 2UV6A 4L0DA 2UV4A 3L2BA 5K23C 4L28A 3KH5A 1XKFA 1O50A 3LQNA 5K22B 3FWRA 3FWSA 2QREE 3DDJA 3PC4A 2QR1E
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IY2 A;  2NYC A;  3OCM A;  4IYS A;  2OUX A;  3KXR A;  5K24 C;  5IIP A;  4NOC A;  5LXQ A;  4FXS A;  3FNA A;  3PC2 A;  2RC3 A;  2YZI A;  3L31 A;  2QH1 A;  4ESY A;  3ORG A;  3FHM A;  4DQW A;  3LFZ A;  4FRY A;  2PFI A;  2NYE A;  3LHH A;  2EMQ A;  4L27 A;  4GQV A;  2OOY E;  4L3V A;  3KPD A;  4IY0 A;  4COO A;  2O16 A;  2EF7 A;  3KPB A;  1PBJ A;  4GQY A;  1Y5H A;  4IY3 A;  3SL7 A;  5MMZ A;  3K6E A;  4P1G A;  4GQW A;  5KS7 A;  5K25 C;  3TDH C;  2QRC E;  2ZY9 A;  3OCO A;  4HG0 A;  2UV5 A;  3TE5 C;  2RIH A;  2YVZ A;  3T4N C;  1YAV A;  3HF7 A;  3PC3 A;  3K2V A;  2RIF A;  4P1O A;  4UUU A;  4IY4 A;  3KPC A;  3OI8 A;  2OOX E;  1PVM A;  4O9K A;  2P9M A;  3GBY A;  2QLV C;  2QRD E;  3LV9 A;  2UV7 A;  2YZQ A;  2YVX A;  2YVY A;  2D4Z A;  3I8N A;  4PCU A;  4ESY B;  3FV6 A;  2UV6 A;  4L0D A;  2UV4 A;  3L2B A;  5K23 C;  4L28 A;  3KH5 A;  1XKF A;  1O50 A;  3LQN A;  5K22 B;  3FWR A;  3FWS A;  2QRE E;  3DDJ A;  3PC4 A;  2QR1 E; 
#chains in the Genus database with same CATH topology
 4IY2 A;  2NYC A;  3OCM A;  4IYS A;  2OUX A;  3KXR A;  5K24 C;  5IIP A;  4NOC A;  5LXQ A;  4FXS A;  3FNA A;  3PC2 A;  2RC3 A;  2YZI A;  3L31 A;  2QH1 A;  4ESY A;  3ORG A;  3FHM A;  4DQW A;  3LFZ A;  4FRY A;  2PFI A;  2NYE A;  3LHH A;  2EMQ A;  2JA3 A;  4L27 A;  4GQV A;  2OOY E;  4L3V A;  3KPD A;  4IY0 A;  4COO A;  2O16 A;  2EF7 A;  3KPB A;  1PBJ A;  4GQY A;  1Y5H A;  4IY3 A;  3SL7 A;  5MMZ A;  3K6E A;  4P1G A;  4GQW A;  5KS7 A;  5K25 C;  3TDH C;  2QRC E;  2ZY9 A;  3OCO A;  4HG0 A;  2UV5 A;  3TE5 C;  2RIH A;  2YVZ A;  3T4N C;  1YAV A;  3HF7 A;  3PC3 A;  3K2V A;  2RIF A;  4P1O A;  4UUU A;  4IY4 A;  3KPC A;  3OI8 A;  2OOX E;  1PVM A;  4O9K A;  2P9M A;  3GBY A;  2QLV C;  2QRD E;  3LV9 A;  2UV7 A;  2YZQ A;  2YVX A;  2YVY A;  2D4Z A;  3I8N A;  4PCU A;  4ESY B;  3FV6 A;  2J9L A;  2UV6 A;  4L0D A;  2UV4 A;  3L2B A;  5K23 C;  4L28 A;  3KH5 A;  1XKF A;  1O50 A;  3LQN A;  5K22 B;  3FWR A;  3FWS A;  2QRE E;  3DDJ A;  3PC4 A;  2QR1 E; 
#chains in the Genus database with same CATH homology
 4IY2 A;  2NYC A;  3OCM A;  4IYS A;  2OUX A;  3KXR A;  5K24 C;  5IIP A;  4NOC A;  5LXQ A;  4FXS A;  3FNA A;  3PC2 A;  2RC3 A;  2YZI A;  3L31 A;  2QH1 A;  4ESY A;  3ORG A;  3FHM A;  4DQW A;  3LFZ A;  4FRY A;  2PFI A;  2NYE A;  3LHH A;  2EMQ A;  2JA3 A;  4L27 A;  4GQV A;  2OOY E;  4L3V A;  3KPD A;  4IY0 A;  4COO A;  2O16 A;  2EF7 A;  3KPB A;  1PBJ A;  4GQY A;  1Y5H A;  4IY3 A;  3SL7 A;  5MMZ A;  3K6E A;  4P1G A;  4GQW A;  5KS7 A;  5K25 C;  3TDH C;  2QRC E;  2ZY9 A;  3OCO A;  4HG0 A;  2UV5 A;  3TE5 C;  2RIH A;  2YVZ A;  3T4N C;  1YAV A;  3HF7 A;  3PC3 A;  3K2V A;  2RIF A;  4P1O A;  4UUU A;  4IY4 A;  3KPC A;  3OI8 A;  2OOX E;  1PVM A;  4O9K A;  2P9M A;  3GBY A;  2QLV C;  2QRD E;  3LV9 A;  2UV7 A;  2YZQ A;  2YVX A;  2YVY A;  2D4Z A;  3I8N A;  4PCU A;  4ESY B;  3FV6 A;  2J9L A;  2UV6 A;  4L0D A;  2UV4 A;  3L2B A;  5K23 C;  4L28 A;  3KH5 A;  1XKF A;  1O50 A;  3LQN A;  5K22 B;  3FWR A;  3FWS A;  2QRE E;  3DDJ A;  3PC4 A;  2QR1 E; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...