3GA1A

Crystal structure of the human nac1 poz domain
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
113
structure length
113
Chain Sequence
QTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNSRSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords Nucleus accumbens-associated protein 1
publication title Structure of the human Nac1 POZ domain
pubmed doi rcsb
source organism Homo sapiens
total genus 32
structure length 113
sequence length 113
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-02-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00651 BTB BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 3ga1A00
4U2NA 1P22B 5JH5B 3ZRFB 5A6RA 5H7GA 1FQVB 3M8VA 4BGCA 5LLIB 2E32B 5DAFA 2ASTA 2I2RA 1LDKD 3LUTB 2C9WC 4BKSB 2ASSA 4W9HH 4CRHA 3L2OA 3E4UA 1VCBB 4W9KB 1EOEA 1FS1B 4JTAB 4BKTB 3HVEB 3HTMA 3ZRCB 1R28A 4W9GB 3V7DA 2OVQA 3C6OA 3ZNGB 4CXIA 4I6JC 2NN2A 2OVPA 3OHVA 3MKSA 1LQBB 4N9F5 1HV2A 4W9DB 2JZ3C 4W9EB 3OGLA 3GA1A 4U2MA 1R29A 1NN7A 2PPIA 2P1NA 4JTCB 4WQOC 3ZUNB 4AP2A 4B9KB 3C6PA 2Z8HA 3B84A 2E31B 1R2BA 5H7HA 2FNJC 2NZ0B 1EXBE 4UIJA 2P1PA 5BXHA 4HXIA 3ZTCB 2P1QA 3DCGB 5BXBA 3OHUA 1T1DA 4JGHC 4UYIA 4CXTA 3HQIA 3WSOB 3C6NA 4W9JB 1BUOA 5BXDA 4EOZA 2IF5A 1LM8C 3KVTA 4U77A 5HYWB 5A15A 1FS2B 2MA9C 2VKPA 1A68A 1S1GA 5HZGC 4B95B 3FKCA 4JTDB 1CS3A 4W9HB 2P1OA 1QDWA 3ZKJB 5EUPA 4W9FB 4AWJB 4W9IB 2IZVC 3HVEA 1QDVA 3OGMA 1EODA 3OGKA 2P1MA 3HU6A 4AJYC 5IBKA 5DADA 4ZOUA 1DSXA 3M5BA 3LNMB 1EOFA 4B9KE 2Q81A 4J8ZA 2R9RB 4APFA 3M4TA 2IHCA 5BO4C 3DRZA 3LBZA 3BIMA 4W9CB 2VPKA 4CXJA 5FTAA 3ZTDB 3M52A 1NEXA 2YY9A 4W9LB 3I3NA 2OVRA 2A79B 4CP3A
chains in the Genus database with same CATH superfamily
4U2NA 1P22B 5JH5B 3ZRFB 5A6RA 5H7GA 1FQVB 3M8VA 4BGCA 5LLIB 2E32B 5DAFA 2ASTA 3DRYA 2I2RA 1LDKD 3LUTB 2C9WC 4BKSB 2ASSA 4W9HH 4CRHA 3L2OA 3E4UA 1VCBB 4W9KB 1EOEA 1FS1B 4JTAB 4BKTB 3HVEB 3HTMA 3ZRCB 1R28A 4W9GB 3V7DA 2OVQA 3C6OA 3ZNGB 4CXIA 4I6JC 2NN2A 2OVPA 3OHVA 3MKSA 1LQBB 4N9F5 1HV2A 4W9DB 2JZ3C 4W9EB 3OGLA 3GA1A 4U2MA 1R29A 1NN7A 2PPIA 2P1NA 4JTCB 4WQOC 3ZUNB 4AP2A 4B9KB 3C6PA 2Z8HA 3B84A 2E31B 1R2BA 5H7HA 2FNJC 2NZ0B 1EXBE 4UIJA 2P1PA 4YY8A 5BXHA 4HXIA 3ZTCB 2P1QA 3DCGB 5BXBA 3OHUA 1T1DA 4JGHC 4UYIA 4CXTA 3HQIA 3WSOB 3C6NA 4W9JB 1BUOA 3DRXA 5BXDA 4EOZA 2IF5A 1LM8C 3KVTA 4U77A 5HYWB 5A15A 1FS2B 2MA9C 2VKPA 1A68A 1S1GA 5HZGC 4B95B 3FKCA 4JTDB 1CS3A 4W9HB 2P1OA 1QDWA 3ZKJB 5EUPA 4W9FB 4AWJB 4W9IB 2IZVC 3HVEA 1QDVA 3OGMA 1EODA 3OGKA 2P1MA 3HU6A 4AJYC 5IBKA 5DADA 4ZOUA 1DSXA 3M5BA 3LNMB 1EOFA 4B9KE 2Q81A 4J8ZA 2R9RB 4APFA 3M4TA 2IHCA 5BO4C 3DRZA 3LBZA 3BIMA 4W9CB 2VPKA 4CXJA 5FTAA 3ZTDB 3M52A 1NEXA 2YY9A 4W9LB 3I3NA 2OVRA 4ZGCA 2A79B 4CP3A
chains in the Genus database with same CATH topology
4U2NA 1P22B 5JH5B 3ZRFB 5A6RA 5H7GA 1FQVB 3M8VA 4BGCA 5LLIB 2E32B 5DAFA 2ASTA 3DRYA 2I2RA 1LDKD 3LUTB 2C9WC 4BKSB 2ASSA 4W9HH 4CRHA 3L2OA 3E4UA 1VCBB 4W9KB 1EOEA 1FS1B 4JTAB 4BKTB 3HVEB 3HTMA 3ZRCB 1R28A 4W9GB 3V7DA 2OVQA 3C6OA 3ZNGB 4CXIA 4I6JC 2NN2A 2OVPA 3OHVA 3MKSA 1LQBB 4N9F5 1HV2A 4W9DB 2JZ3C 4W9EB 3OGLA 3GA1A 4U2MA 1R29A 1NN7A 2PPIA 2P1NA 4JTCB 4WQOC 3ZUNB 4AP2A 4B9KB 3C6PA 2Z8HA 3B84A 2E31B 1R2BA 5H7HA 2FNJC 2NZ0B 1EXBE 4UIJA 2P1PA 4YY8A 5BXHA 4HXIA 3ZTCB 2P1QA 3DCGB 5BXBA 3OHUA 1T1DA 4JGHC 4UYIA 4CXTA 3HQIA 3WSOB 3C6NA 4W9JB 1BUOA 3DRXA 5BXDA 4EOZA 2IF5A 1LM8C 3KVTA 4U77A 5HYWB 5A15A 1FS2B 2MA9C 2VKPA 1A68A 1S1GA 5HZGC 4B95B 3FKCA 4JTDB 1CS3A 4W9HB 2P1OA 1QDWA 3ZKJB 5EUPA 4W9FB 4AWJB 4W9IB 2IZVC 3HVEA 1QDVA 3OGMA 1EODA 3OGKA 2P1MA 3HU6A 4AJYC 5IBKA 5DADA 4ZOUA 1DSXA 3M5BA 3LNMB 1EOFA 4B9KE 2Q81A 4J8ZA 2R9RB 4APFA 3M4TA 2IHCA 5BO4C 3DRZA 3LBZA 3BIMA 4W9CB 2VPKA 4CXJA 5FTAA 3ZTDB 3M52A 1NEXA 2YY9A 4W9LB 3I3NA 2OVRA 4ZGCA 2A79B 4CP3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4U2N A;  1P22 B;  5JH5 B;  3ZRF B;  5A6R A;  5H7G A;  1FQV B;  3M8V A;  4BGC A;  5LLI B;  2E32 B;  5DAF A;  2AST A;  2I2R A;  1LDK D;  3LUT B;  2C9W C;  4BKS B;  2ASS A;  4W9H H;  4CRH A;  3L2O A;  3E4U A;  1VCB B;  4W9K B;  1EOE A;  1FS1 B;  4JTA B;  4BKT B;  3HVE B;  3HTM A;  3ZRC B;  1R28 A;  4W9G B;  3V7D A;  2OVQ A;  3C6O A;  3ZNG B;  4CXI A;  4I6J C;  2NN2 A;  2OVP A;  3OHV A;  3MKS A;  1LQB B;  4N9F 5;  1HV2 A;  4W9D B;  2JZ3 C;  4W9E B;  3OGL A;  3GA1 A;  4U2M A;  1R29 A;  1NN7 A;  2PPI A;  2P1N A;  4JTC B;  4WQO C;  3ZUN B;  4AP2 A;  4B9K B;  3C6P A;  2Z8H A;  3B84 A;  2E31 B;  1R2B A;  5H7H A;  2FNJ C;  2NZ0 B;  1EXB E;  4UIJ A;  2P1P A;  5BXH A;  4HXI A;  3ZTC B;  2P1Q A;  3DCG B;  5BXB A;  3OHU A;  1T1D A;  4JGH C;  4UYI A;  4CXT A;  3HQI A;  3WSO B;  3C6N A;  4W9J B;  1BUO A;  5BXD A;  4EOZ A;  2IF5 A;  1LM8 C;  3KVT A;  4U77 A;  5HYW B;  5A15 A;  1FS2 B;  2MA9 C;  2VKP A;  1A68 A;  1S1G A;  5HZG C;  4B95 B;  3FKC A;  4JTD B;  1CS3 A;  4W9H B;  2P1O A;  1QDW A;  3ZKJ B;  5EUP A;  4W9F B;  4AWJ B;  4W9I B;  2IZV C;  3HVE A;  1QDV A;  3OGM A;  1EOD A;  3OGK A;  2P1M A;  3HU6 A;  4AJY C;  5IBK A;  5DAD A;  4ZOU A;  1DSX A;  3M5B A;  3LNM B;  1EOF A;  4B9K E;  2Q81 A;  4J8Z A;  2R9R B;  4APF A;  3M4T A;  2IHC A;  5BO4 C;  3DRZ A;  3LBZ A;  3BIM A;  4W9C B;  2VPK A;  4CXJ A;  5FTA A;  3ZTD B;  3M52 A;  1NEX A;  2YY9 A;  4W9L B;  3I3N A;  2OVR A;  2A79 B;  4CP3 A; 
#chains in the Genus database with same CATH topology
 4U2N A;  1P22 B;  5JH5 B;  3ZRF B;  5A6R A;  5H7G A;  1FQV B;  3M8V A;  4BGC A;  5LLI B;  2E32 B;  5DAF A;  2AST A;  3DRY A;  2I2R A;  1LDK D;  3LUT B;  2C9W C;  4BKS B;  2ASS A;  4W9H H;  4CRH A;  3L2O A;  3E4U A;  1VCB B;  4W9K B;  1EOE A;  1FS1 B;  4JTA B;  4BKT B;  3HVE B;  3HTM A;  3ZRC B;  1R28 A;  4W9G B;  3V7D A;  2OVQ A;  3C6O A;  3ZNG B;  4CXI A;  4I6J C;  2NN2 A;  2OVP A;  3OHV A;  3MKS A;  1LQB B;  4N9F 5;  1HV2 A;  4W9D B;  2JZ3 C;  4W9E B;  3OGL A;  3GA1 A;  4U2M A;  1R29 A;  1NN7 A;  2PPI A;  2P1N A;  4JTC B;  4WQO C;  3ZUN B;  4AP2 A;  4B9K B;  3C6P A;  2Z8H A;  3B84 A;  2E31 B;  1R2B A;  5H7H A;  2FNJ C;  2NZ0 B;  1EXB E;  4UIJ A;  2P1P A;  4YY8 A;  5BXH A;  4HXI A;  3ZTC B;  2P1Q A;  3DCG B;  5BXB A;  3OHU A;  1T1D A;  4JGH C;  4UYI A;  4CXT A;  3HQI A;  3WSO B;  3C6N A;  4W9J B;  1BUO A;  3DRX A;  5BXD A;  4EOZ A;  2IF5 A;  1LM8 C;  3KVT A;  4U77 A;  5HYW B;  5A15 A;  1FS2 B;  2MA9 C;  2VKP A;  1A68 A;  1S1G A;  5HZG C;  4B95 B;  3FKC A;  4JTD B;  1CS3 A;  4W9H B;  2P1O A;  1QDW A;  3ZKJ B;  5EUP A;  4W9F B;  4AWJ B;  4W9I B;  2IZV C;  3HVE A;  1QDV A;  3OGM A;  1EOD A;  3OGK A;  2P1M A;  3HU6 A;  4AJY C;  5IBK A;  5DAD A;  4ZOU A;  1DSX A;  3M5B A;  3LNM B;  1EOF A;  4B9K E;  2Q81 A;  4J8Z A;  2R9R B;  4APF A;  3M4T A;  2IHC A;  5BO4 C;  3DRZ A;  3LBZ A;  3BIM A;  4W9C B;  2VPK A;  4CXJ A;  5FTA A;  3ZTD B;  3M52 A;  1NEX A;  2YY9 A;  4W9L B;  3I3N A;  2OVR A;  4ZGC A;  2A79 B;  4CP3 A; 
#chains in the Genus database with same CATH homology
 4U2N A;  1P22 B;  5JH5 B;  3ZRF B;  5A6R A;  5H7G A;  1FQV B;  3M8V A;  4BGC A;  5LLI B;  2E32 B;  5DAF A;  2AST A;  3DRY A;  2I2R A;  1LDK D;  3LUT B;  2C9W C;  4BKS B;  2ASS A;  4W9H H;  4CRH A;  3L2O A;  3E4U A;  1VCB B;  4W9K B;  1EOE A;  1FS1 B;  4JTA B;  4BKT B;  3HVE B;  3HTM A;  3ZRC B;  1R28 A;  4W9G B;  3V7D A;  2OVQ A;  3C6O A;  3ZNG B;  4CXI A;  4I6J C;  2NN2 A;  2OVP A;  3OHV A;  3MKS A;  1LQB B;  4N9F 5;  1HV2 A;  4W9D B;  2JZ3 C;  4W9E B;  3OGL A;  3GA1 A;  4U2M A;  1R29 A;  1NN7 A;  2PPI A;  2P1N A;  4JTC B;  4WQO C;  3ZUN B;  4AP2 A;  4B9K B;  3C6P A;  2Z8H A;  3B84 A;  2E31 B;  1R2B A;  5H7H A;  2FNJ C;  2NZ0 B;  1EXB E;  4UIJ A;  2P1P A;  4YY8 A;  5BXH A;  4HXI A;  3ZTC B;  2P1Q A;  3DCG B;  5BXB A;  3OHU A;  1T1D A;  4JGH C;  4UYI A;  4CXT A;  3HQI A;  3WSO B;  3C6N A;  4W9J B;  1BUO A;  3DRX A;  5BXD A;  4EOZ A;  2IF5 A;  1LM8 C;  3KVT A;  4U77 A;  5HYW B;  5A15 A;  1FS2 B;  2MA9 C;  2VKP A;  1A68 A;  1S1G A;  5HZG C;  4B95 B;  3FKC A;  4JTD B;  1CS3 A;  4W9H B;  2P1O A;  1QDW A;  3ZKJ B;  5EUP A;  4W9F B;  4AWJ B;  4W9I B;  2IZV C;  3HVE A;  1QDV A;  3OGM A;  1EOD A;  3OGK A;  2P1M A;  3HU6 A;  4AJY C;  5IBK A;  5DAD A;  4ZOU A;  1DSX A;  3M5B A;  3LNM B;  1EOF A;  4B9K E;  2Q81 A;  4J8Z A;  2R9R B;  4APF A;  3M4T A;  2IHC A;  5BO4 C;  3DRZ A;  3LBZ A;  3BIM A;  4W9C B;  2VPK A;  4CXJ A;  5FTA A;  3ZTD B;  3M52 A;  1NEX A;  2YY9 A;  4W9L B;  3I3N A;  2OVR A;  4ZGC A;  2A79 B;  4CP3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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