3GTJC

Backtracked rna polymerase ii complex with 13mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtjC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtjC01
3CQZC 4LLGA 3WODA 3M3YC 4G7OA 2PMZL 5M5YK 5IYDC 5C4XC 2PPBA 4BBRK 2JA7K 3I4NK 3GTLC 3CQZK 3M3YK 2NVQC 4C3JC 5C4XK 5IYDK 4XLPA 3GTLK 1TWFC 2B63C 2R92C 3PO2C 5C4JC 1I3QC 5TMFA 4Y52C 4C2MC 4A3EC 1Y1WC 3S14C 2JA6K 3GTKK 1TWFK 1TWAC 2B63K 4YG2A 5C44C 2R92K 5C4JK 1WCMC 1TWHK 3PO3K 4Y52K 3S15C 3S2DC 1TWAK 4BXXC 4X6AK 1TWGC 1WCMK 1I6HC 3HOVK 3S15K 3H0GK 4BXXK 3HKZD 1TWGK 3K7AC 4BBSC 4QJVB 5M3FK 1I6HK 1YNNA 3EQLA 1K83C 4A3IC 2O5IA 2R7ZC 1XPPA 3K7AK 2NVTC 4BBSK 3S1MK 3I4MC 2NVXC 2VUMC 3RZDC 1K83K 3H3VL 2R7ZK 2Y0SD 2NVTK 5D4DA 1Y1VK 3FKIC 3S17C 2NVXK 2VUMK 4ZH4A 4QIWD 4A3GC 5IP7K 3RZDK 3I4MK 4MQ9A 3GTGC 4Q5SA 2WAQL 3HOUC 3S17K 3HOXC 5FLMC 4C3IC 4A3MC 3S2HC 2BE5A 3GTGK 3HOUK 5TMCA 4XSZA 1SMYA 4GZYA 2WB1L 5M3MK 5FLMK 4A3KC 2NVQK 3GTPC 5C3EC 2E2JC 4A93C 3S1RC 4C3JK 3S2HK 4OIRA 3HOWC 4A3KK 4A93K 2JA5C 3HOYC 3PO2K 1I3QK 3S14K 4C2MK 3GTMC 4A3DC 4A3EK 1Y1WK 4LJZA 5C44K 2PA8L 4Y7NC 4YFKA 3GTMK 3DXJA 3S2DK 4QJVA 5M5WK 2JA8C 1R9TC 4LK1A 3M4OC 2E2HC 4A3IK 3M4OK 2E2HK 1I6VA 4G7HA 2YU9C 3HOZC 4AYBL 3GTJC 2NVYC 4XLNA 2R93C 3RZOC 3FKIK 2YU9K 4A3GK 2A69A 4BY7C 5M5XK 3RZOK 3HOXK 4KN7A 4C3IK 4A3MK 4YFXA 4NOIA 3GTOC 4YFNA 4MEYA 4Q4ZA 1YNJA 1ZYRA 3GTOK 3GTPK 5C3EK 2E2JK 3H3VD 3S1RK 3HOWK 1HQMA 1I50C 2A6HA 3S1NC 2JA5K 2E2IC 3HOYK 2PMZD 4A3DK 2A68A 2WAQD 4A3JC 3S1NK 5IYCC 2E2IK 3S1QC 4Y7NK 4OIQA 4G7ZA 2CW0A 3I4NC 4BBRC 2WB1D 5IYCK 3S1QK 4A3BC 4LK0A 4KN4A 2JA8K 3HKZL 1R9TK 4OIOA 2O5JA 4A3BK 4JK1A 4OIPA 5IP9C 3GTKC 2JA6C 3S1MC 4C3HC 3S16C 2PA8D 4KMUA 1TWHC 5IP9K 2Y0SL 3GTJK 3HOZK 4C3HK 2NVYK 2R93K 4X6AC 4QIWL 3S16K 4OINA 3HOVC 1SFOC 3H0GC 4BY7K 4A3LC 3GTQC 4XSXA 1SFOK 5IYBC 4BY1C 5FJ8K 4A3LK 4A3FC 4A3CC 3GTQK 1BDFA 4AYBD 5IYBK 4BY1K 1IW7A 2A6EA 1Y1VC 4A3FK 1I50K 4A3CK 1TWCC 5IP7C 3PO3C 4MEXA 4A3JK 1TWCK 2JA7C
chains in the Genus database with same CATH superfamily
2PMZL 4LLGA 3M3YC 5JVOA 5C4XC 2PPBA 3M3YK 1O29A 4PABA 5E68A 5C4XK 4LOWA 3S14C 3N0BA 3S1MK 1C0AA 3S15C 4BKWA 3GDZA 1TWGC 1O2AA 2Y3PA 3S15K 3OPFA 3HKZD 2L3UA 1TWGK 2NVYA 1O24A 2O5IA 2NVTC 5HQHA 1ISEA 1DD5A 1HI9A 2VUMC 2Y0SD 3GTOA 2NVTK 5D4DA 5JFEA 3FKIC 3S17C 2VUMK 4ZH4A 4A3GC 5DM6S 1XZPA 3GTGC 3S17K 3GTGK 1PJ6A 2GAHC 4A3KC 2NVQK 4A93C 3VA7A 3S1RC 3GEEA 4A3KK 4FM9A 4A93K 5JVGS 1I3QK 2GSOA 4G0UA 5C44K 2PA8L 4Y7NC 1IE0A 3S2DK 1DCOA 1UV7A 4GTAA 1USMA 1I6VA 1JVIA 1VJEA 3A8JA 4LQYA 2NVYC 3RZOC 4RMFA 5M5XK 3RZOK 4KN7A 4C3IK 2PHCB 4YFXA 1BJTA 3GTOC 3TFHA 4GT9A 4Q4ZA 1L0WA 3GTOK 3GTPK 2JA7A 2V6SA 1HQMA 3S1NC 1WOPA 1DCHA 1O2FB 4A3DK 4O2DA 3S1NK 2RH6A 4OIQA 1XZQB 5IORA 3I4NC 4BBRC 2XCOA 4LK0A 1XXCA 4KDDA 1R9TK 4OIOA 2ZJRS 5IP9C 4KB4A 1F7UA 5IP9K 1XXBA 1K83A 2R93K 4X6AC 4QIWL 1BS2A 3FOEA 5CHPA 3AH5A 2FQOA 3GEHA 1J6WA 1F7VA 4WFBS 4A3CC 1J6XA 4A3CK 5IP7C 3OEPA 2XCRB 1YCLA 4MEXA 4WF9S 4A3JK 2JA7C 3CQZC 3WODA 3GEIA 5M5YK 2JA5A 2JA7K 3N0CA 3CQZK 4C3JC 5EGHA 3SZYA 1YX2A 4Y52C 4C2MC 4A3EC 3GTKK 3G4AA 4YG2A 1PJ5A 5HL7S 4Y52K 2E2HA 1EI6A 3IPJA 1I6HC 3TFIA 3GTJA 3K7AC 1I6HK 1K83C 3JSTA 5IOSA 3K7AK 3I4MC 3RZDC 1K83K 1Y1VK 3I4MK 3RZDK 3GTQA 4MQ9A 4Q5SA 3HOUC 5FLMC 4A3MC 3L4JA 1I50A 3S2HC 1IS1A 1PJ7A 3HOUK 4U67S 1WIHA 1IL2A 4XSZA 1SMYA 5FLMK 3NUHA 3S2HK 2E2JC 4LR2A 4WFAS 5HL8A 4OIRA 3HOWC 5JVHS 3V4GA 5IOQA 2JA5C 3S14K 2CFAB 4LJZA 1B4BA 3DXJA 2JA6A 2L5NA 5M5WK 1WOOA 1ZQ1C 1TWHA 2JA8C 4LK1A 1TWAA 2E2HC 3G4CA 3BP3A 3H0GA 2E2HK 4AYBL 3GTJC 2GAGC 3FKIK 1G51A 1O25A 4A3GK 2R7ZA 4BY7C 4YFNA 1WORA 3CAGA 1YNJA 4KMHA 1ZYRA 3S1RK 3LAPA 1I50C 2A6HA 2ZJPS 5IYCC 4KAWX 4Y7NK 3N3YA 2R92A 4G7ZA 1O28A 1Y1WA 5IYCK 3AQPA 2KWAA 3GTMA 2D6FC 2O5JA 4JK1A 2JA6C 1ZXOA 1XXAA 3S16C 2PA8D 1TWHC 2JH3A 3MMLB 2NVYK 3S16K 1O27A 3HOVC 3H0GC 4A3LC 2KXYA 1WQFA 2CFAA 5FJ8K 4A3LK 1BDFA 3FHZA 4KB2A 2ZJQS 1JOEA 1J6VA 5IYDC 3LAJA 3I4NK 4BBRK 3DLLS 4FZBA 5IYDK 1WSRA 1VH2A 1WSVA 2R92C 3PO2C 5C4JC 1EFWA 5TMFA 4AH6A 1Y1WC 1BGWA 4G0VA 3T01A 2R92K 4M1XA 5C4JK 2P5MA 4GTBA 4X6AK 3ERED 1GE9A 5M3FK 4BBSC 4A3IC 1XPPA 4BBSK 4WFNS 3H3VL 1F93A 1IBAA 3BUEA 4QIWD 5IP7K 3TFJA 2WAQL 4KMAA 4P9SA 3HOXC 3GIRA 4PAAA 4XCHA 2KPUA 5TMCA 3L4KA 4GZYA 2WB1L 3T00A 4P5BA 5C3EC 4C3JK 1AB4A 1WQGA 3HOYC 4C2MK 4A3EK 1J98A 4KASA 4YFKA 4QJVA 4GTDA 3AD9C 4IOCS 4WJ4A 1DCPA 3TTGA 3HOZC 4GTLA 2W7VA 3AD7C 1INNA 1ZVUA 1WQHA 3T02A 1EH1A 4A3MK 4MEYA 4KMDA 5EGEA 3HXAA 2E2JK 2KQ1A 2GSNA 3HOWK 2JA5K 1VRQC 3GTLA 2PMZD 2A68A 1VLOA 1B4AA 1F9NA 4KATA 3S1QC 1TWFA 2B63A 2CW0A 1I3QA 1USOA 2ZUEA 2RGRA 3S1QK 2GSUA 4A3BC 4KN4A 1WCMA 3OREA 2JA8K 3HKZL 4A3BK 3S1MC 2ZFZA 4GTEA 4KMUA 2Y0SL 4GTFA 3GTJK 4GTCA 1EK8A 2NVXA 4BY7K 3GSIA 5DM7S 3GTQC 1VGXA 4BY1C 1O2BA 4P5AA 3GTQK 4C45A 4AYBD 4BY1K 1IW7A 1ZBSA 2A6EA 1I50K 5IOTA 1JQWA 3GTPA 4G7OA 2P8TA 3GTLC 5TJ3A 2NVQC 3S0XA 4XLPA 3GTLK 1TWFC 2B63C 4KM9A 4WILA 1I3QC 2JA6K 1TWFK 1TWAC 1R9TA 5C44C 2B63K 4KARA 1WCMC 1TWHK 3S2DC 1TWAK 4BXXC 2FQTA 3BP8C 1WCMK 3HOVK 2YU9A 3H0GK 4BXXK 4QJVB 2R93A 1YNNA 3EQLA 1KQ4A 4ILDA 2R7ZC 1WOSA 2NVXC 2R7ZK 2NVXK 4WCES 4IOAS 4C3IC 3FOFA 2BE5A 3LPXA 3QX3A 2E2IA 4WJ3M 4IO9S 5M3MK 4BLBA 3GTPC 1V5VA 4J3NA 3SZZA 2V6UA 3PO2K 3CQZA 3GTMC 4A3DC 1Y1WK 3GTMK 3AQOA 1FEUA 3GTKA 2V6TA 1R9TC 3M4OC 1O26A 4A3IK 1X31C 3M4OK 1SFOA 4G7HA 2YU9C 4XLNA 2R93C 3PIPS 4DDQA 2YU9K 3A8IA 2A69A 5L46A 3HOXK 1Y1VA 4NOIA 1TWCA 3PIOS 5C3EK 3H3VD 3HOYK 2E2IC 2WAQD 4A3JC 4G0WA 2E2IK 2WB1D 4KC6A 4BLAA 1XZPB 5CJ9A 4KM8A 3A8KA 2XCQA 1TWGA 4OIPA 3GTKC 2EBBA 4C3HC 3LYWA 3CF5S 3HOZK 1IQ0A 4C3HK 4OINA 3Q3QA 4GFQA 2VUMA 1SFOC 3FKIA 1RU0A 2ZUFA 4XSXA 1SFOK 5IYBC 3AD8C 3GTGA 4A3FC 5IYBK 1EQRA 4A3FK 1Y1VC 1TWCC 3PO3C 3ADAC 1XZQA 1TWCK 3PO3K
chains in the Genus database with same CATH topology
3CQZC 4LLGA 3WODA 3M3YC 4G7OA 2PMZL 5M5YK 5IYDC 5C4XC 2PPBA 4BBRK 2JA7K 3I4NK 3GTLC 3CQZK 3M3YK 2NVQC 4C3JC 5C4XK 5IYDK 4XLPA 3GTLK 1TWFC 2B63C 2R92C 3PO2C 5C4JC 1I3QC 5TMFA 4Y52C 4C2MC 4A3EC 1Y1WC 3S14C 2JA6K 3GTKK 1TWFK 1TWAC 2B63K 4YG2A 5C44C 2R92K 5C4JK 1WCMC 1TWHK 3PO3K 4Y52K 3S15C 3S2DC 1TWAK 4BXXC 4X6AK 1TWGC 1WCMK 1I6HC 3HOVK 3S15K 3H0GK 4BXXK 3HKZD 1TWGK 3K7AC 4BBSC 4QJVB 5M3FK 1I6HK 1YNNA 3EQLA 1K83C 4A3IC 2O5IA 2R7ZC 1XPPA 3K7AK 2NVTC 4BBSK 3S1MK 3I4MC 2NVXC 2VUMC 3RZDC 1K83K 3H3VL 2R7ZK 2Y0SD 2NVTK 5D4DA 1Y1VK 3FKIC 3S17C 2NVXK 2VUMK 4ZH4A 4QIWD 4A3GC 5IP7K 3RZDK 3I4MK 4MQ9A 3GTGC 4Q5SA 2WAQL 3HOUC 3S17K 3HOXC 5FLMC 4C3IC 4A3MC 3S2HC 2BE5A 3GTGK 3HOUK 5TMCA 4XSZA 1SMYA 4GZYA 2WB1L 5M3MK 5FLMK 4A3KC 2NVQK 3GTPC 5C3EC 2E2JC 4A93C 3S1RC 4C3JK 3S2HK 4OIRA 3HOWC 4A3KK 4A93K 2JA5C 3HOYC 3PO2K 1I3QK 3S14K 4C2MK 3GTMC 4A3DC 4A3EK 1Y1WK 4LJZA 5C44K 2PA8L 4Y7NC 4YFKA 3GTMK 3DXJA 3S2DK 4QJVA 5M5WK 2JA8C 1R9TC 4LK1A 3M4OC 2E2HC 4A3IK 3M4OK 2E2HK 1I6VA 4G7HA 2YU9C 3HOZC 4AYBL 3GTJC 2NVYC 4XLNA 2R93C 3RZOC 3FKIK 2YU9K 4A3GK 2A69A 4BY7C 5M5XK 3RZOK 3HOXK 4KN7A 4C3IK 4A3MK 4YFXA 4NOIA 3GTOC 4YFNA 4MEYA 4Q4ZA 1YNJA 1ZYRA 3GTOK 3GTPK 5C3EK 2E2JK 3H3VD 3S1RK 3HOWK 1HQMA 1I50C 2A6HA 3S1NC 2JA5K 2E2IC 3HOYK 2PMZD 4A3DK 2A68A 2WAQD 4A3JC 3S1NK 5IYCC 2E2IK 3S1QC 4Y7NK 4OIQA 4G7ZA 2CW0A 3I4NC 4BBRC 2WB1D 5IYCK 3S1QK 4A3BC 4LK0A 4KN4A 2JA8K 3HKZL 1R9TK 4OIOA 2O5JA 4A3BK 4JK1A 4OIPA 5IP9C 3GTKC 2JA6C 3S1MC 4C3HC 3S16C 2PA8D 4KMUA 1TWHC 5IP9K 2Y0SL 3GTJK 3HOZK 4C3HK 2NVYK 2R93K 4X6AC 4QIWL 3S16K 4OINA 3HOVC 1SFOC 3H0GC 4BY7K 4A3LC 3GTQC 4XSXA 1SFOK 5IYBC 4BY1C 5FJ8K 4A3LK 4A3FC 4A3CC 3GTQK 1BDFA 4AYBD 5IYBK 4BY1K 1IW7A 2A6EA 1Y1VC 4A3FK 1I50K 4A3CK 1TWCC 5IP7C 3PO3C 4MEXA 4A3JK 1TWCK 2JA7C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CQZ C;  4LLG A;  3WOD A;  3M3Y C;  4G7O A;  2PMZ L;  5M5Y K;  5IYD C;  5C4X C;  2PPB A;  4BBR K;  2JA7 K;  3I4N K;  3GTL C;  3CQZ K;  3M3Y K;  2NVQ C;  4C3J C;  5C4X K;  5IYD K;  4XLP A;  3GTL K;  1TWF C;  2B63 C;  2R92 C;  3PO2 C;  5C4J C;  1I3Q C;  5TMF A;  4Y52 C;  4C2M C;  4A3E C;  1Y1W C;  3S14 C;  2JA6 K;  3GTK K;  1TWF K;  1TWA C;  2B63 K;  4YG2 A;  5C44 C;  2R92 K;  5C4J K;  1WCM C;  1TWH K;  3PO3 K;  4Y52 K;  3S15 C;  3S2D C;  1TWA K;  4BXX C;  4X6A K;  1TWG C;  1WCM K;  1I6H C;  3HOV K;  3S15 K;  3H0G K;  4BXX K;  3HKZ D;  1TWG K;  3K7A C;  4BBS C;  4QJV B;  5M3F K;  1I6H K;  1YNN A;  3EQL A;  1K83 C;  4A3I C;  2O5I A;  2R7Z C;  1XPP A;  3K7A K;  2NVT C;  4BBS K;  3S1M K;  3I4M C;  2NVX C;  2VUM C;  3RZD C;  1K83 K;  3H3V L;  2R7Z K;  2Y0S D;  2NVT K;  5D4D A;  1Y1V K;  3FKI C;  3S17 C;  2NVX K;  2VUM K;  4ZH4 A;  4QIW D;  4A3G C;  5IP7 K;  3RZD K;  3I4M K;  4MQ9 A;  3GTG C;  4Q5S A;  2WAQ L;  3HOU C;  3S17 K;  3HOX C;  5FLM C;  4C3I C;  4A3M C;  3S2H C;  2BE5 A;  3GTG K;  3HOU K;  5TMC A;  4XSZ A;  1SMY A;  4GZY A;  2WB1 L;  5M3M K;  5FLM K;  4A3K C;  2NVQ K;  3GTP C;  5C3E C;  2E2J C;  4A93 C;  3S1R C;  4C3J K;  3S2H K;  4OIR A;  3HOW C;  4A3K K;  4A93 K;  2JA5 C;  3HOY C;  3PO2 K;  1I3Q K;  3S14 K;  4C2M K;  3GTM C;  4A3D C;  4A3E K;  1Y1W K;  4LJZ A;  5C44 K;  2PA8 L;  4Y7N C;  4YFK A;  3GTM K;  3DXJ A;  3S2D K;  4QJV A;  5M5W K;  2JA8 C;  1R9T C;  4LK1 A;  3M4O C;  2E2H C;  4A3I K;  3M4O K;  2E2H K;  1I6V A;  4G7H A;  2YU9 C;  3HOZ C;  4AYB L;  3GTJ C;  2NVY C;  4XLN A;  2R93 C;  3RZO C;  3FKI K;  2YU9 K;  4A3G K;  2A69 A;  4BY7 C;  5M5X K;  3RZO K;  3HOX K;  4KN7 A;  4C3I K;  4A3M K;  4YFX A;  4NOI A;  3GTO C;  4YFN A;  4MEY A;  4Q4Z A;  1YNJ A;  1ZYR A;  3GTO K;  3GTP K;  5C3E K;  2E2J K;  3H3V D;  3S1R K;  3HOW K;  1HQM A;  1I50 C;  2A6H A;  3S1N C;  2JA5 K;  2E2I C;  3HOY K;  2PMZ D;  4A3D K;  2A68 A;  2WAQ D;  4A3J C;  3S1N K;  5IYC C;  2E2I K;  3S1Q C;  4Y7N K;  4OIQ A;  4G7Z A;  2CW0 A;  3I4N C;  4BBR C;  2WB1 D;  5IYC K;  3S1Q K;  4A3B C;  4LK0 A;  4KN4 A;  2JA8 K;  3HKZ L;  1R9T K;  4OIO A;  2O5J A;  4A3B K;  4JK1 A;  4OIP A;  5IP9 C;  3GTK C;  2JA6 C;  3S1M C;  4C3H C;  3S16 C;  2PA8 D;  4KMU A;  1TWH C;  5IP9 K;  2Y0S L;  3GTJ K;  3HOZ K;  4C3H K;  2NVY K;  2R93 K;  4X6A C;  4QIW L;  3S16 K;  4OIN A;  3HOV C;  1SFO C;  3H0G C;  4BY7 K;  4A3L C;  3GTQ C;  4XSX A;  1SFO K;  5IYB C;  4BY1 C;  5FJ8 K;  4A3L K;  4A3F C;  4A3C C;  3GTQ K;  1BDF A;  4AYB D;  5IYB K;  4BY1 K;  1IW7 A;  2A6E A;  1Y1V C;  4A3F K;  1I50 K;  4A3C K;  1TWC C;  5IP7 C;  3PO3 C;  4MEX A;  4A3J K;  1TWC K;  2JA7 C; 
#chains in the Genus database with same CATH topology
 2PMZ L;  4LLG A;  3M3Y C;  5JVO A;  5C4X C;  2PPB A;  3M3Y K;  1O29 A;  4PAB A;  5E68 A;  5C4X K;  4LOW A;  3S14 C;  3N0B A;  3S1M K;  1C0A A;  3S15 C;  4BKW A;  3GDZ A;  1TWG C;  1O2A A;  2Y3P A;  3S15 K;  3OPF A;  3HKZ D;  2L3U A;  1TWG K;  2NVY A;  1O24 A;  2O5I A;  2NVT C;  5HQH A;  1ISE A;  1DD5 A;  1HI9 A;  2VUM C;  2Y0S D;  3GTO A;  2NVT K;  5D4D A;  5JFE A;  3FKI C;  3S17 C;  2VUM K;  4ZH4 A;  4A3G C;  5DM6 S;  1XZP A;  3GTG C;  3S17 K;  3GTG K;  1PJ6 A;  2GAH C;  4A3K C;  2NVQ K;  4A93 C;  3VA7 A;  3S1R C;  3GEE A;  4A3K K;  4FM9 A;  4A93 K;  5JVG S;  1I3Q K;  2GSO A;  4G0U A;  5C44 K;  2PA8 L;  4Y7N C;  1IE0 A;  3S2D K;  1DCO A;  1UV7 A;  4GTA A;  1USM A;  1I6V A;  1JVI A;  1VJE A;  3A8J A;  4LQY A;  2NVY C;  3RZO C;  4RMF A;  5M5X K;  3RZO K;  4KN7 A;  4C3I K;  2PHC B;  4YFX A;  1BJT A;  3GTO C;  3TFH A;  4GT9 A;  4Q4Z A;  1L0W A;  3GTO K;  3GTP K;  2JA7 A;  2V6S A;  1HQM A;  3S1N C;  1WOP A;  1DCH A;  1O2F B;  4A3D K;  4O2D A;  3S1N K;  2RH6 A;  4OIQ A;  1XZQ B;  5IOR A;  3I4N C;  4BBR C;  2XCO A;  4LK0 A;  1XXC A;  4KDD A;  1R9T K;  4OIO A;  2ZJR S;  5IP9 C;  4KB4 A;  1F7U A;  5IP9 K;  1XXB A;  1K83 A;  2R93 K;  4X6A C;  4QIW L;  1BS2 A;  3FOE A;  5CHP A;  3AH5 A;  2FQO A;  3GEH A;  1J6W A;  1F7V A;  4WFB S;  4A3C C;  1J6X A;  4A3C K;  5IP7 C;  3OEP A;  2XCR B;  1YCL A;  4MEX A;  4WF9 S;  4A3J K;  2JA7 C;  3CQZ C;  3WOD A;  3GEI A;  5M5Y K;  2JA5 A;  2JA7 K;  3N0C A;  3CQZ K;  4C3J C;  5EGH A;  3SZY A;  1YX2 A;  4Y52 C;  4C2M C;  4A3E C;  3GTK K;  3G4A A;  4YG2 A;  1PJ5 A;  5HL7 S;  4Y52 K;  2E2H A;  1EI6 A;  3IPJ A;  1I6H C;  3TFI A;  3GTJ A;  3K7A C;  1I6H K;  1K83 C;  3JST A;  5IOS A;  3K7A K;  3I4M C;  3RZD C;  1K83 K;  1Y1V K;  3I4M K;  3RZD K;  3GTQ A;  4MQ9 A;  4Q5S A;  3HOU C;  5FLM C;  4A3M C;  3L4J A;  1I50 A;  3S2H C;  1IS1 A;  1PJ7 A;  3HOU K;  4U67 S;  1WIH A;  1IL2 A;  4XSZ A;  1SMY A;  5FLM K;  3NUH A;  3S2H K;  2E2J C;  4LR2 A;  4WFA S;  5HL8 A;  4OIR A;  3HOW C;  5JVH S;  3V4G A;  5IOQ A;  2JA5 C;  3S14 K;  2CFA B;  4LJZ A;  1B4B A;  3DXJ A;  2JA6 A;  2L5N A;  5M5W K;  1WOO A;  1ZQ1 C;  1TWH A;  2JA8 C;  4LK1 A;  1TWA A;  2E2H C;  3G4C A;  3BP3 A;  3H0G A;  2E2H K;  4AYB L;  3GTJ C;  2GAG C;  3FKI K;  1G51 A;  1O25 A;  4A3G K;  2R7Z A;  4BY7 C;  4YFN A;  1WOR A;  3CAG A;  1YNJ A;  4KMH A;  1ZYR A;  3S1R K;  3LAP A;  1I50 C;  2A6H A;  2ZJP S;  5IYC C;  4KAW X;  4Y7N K;  3N3Y A;  2R92 A;  4G7Z A;  1O28 A;  1Y1W A;  5IYC K;  3AQP A;  2KWA A;  3GTM A;  2D6F C;  2O5J A;  4JK1 A;  2JA6 C;  1ZXO A;  1XXA A;  3S16 C;  2PA8 D;  1TWH C;  2JH3 A;  3MML B;  2NVY K;  3S16 K;  1O27 A;  3HOV C;  3H0G C;  4A3L C;  2KXY A;  1WQF A;  2CFA A;  5FJ8 K;  4A3L K;  1BDF A;  3FHZ A;  4KB2 A;  2ZJQ S;  1JOE A;  1J6V A;  5IYD C;  3LAJ A;  3I4N K;  4BBR K;  3DLL S;  4FZB A;  5IYD K;  1WSR A;  1VH2 A;  1WSV A;  2R92 C;  3PO2 C;  5C4J C;  1EFW A;  5TMF A;  4AH6 A;  1Y1W C;  1BGW A;  4G0V A;  3T01 A;  2R92 K;  4M1X A;  5C4J K;  2P5M A;  4GTB A;  4X6A K;  3ERE D;  1GE9 A;  5M3F K;  4BBS C;  4A3I C;  1XPP A;  4BBS K;  4WFN S;  3H3V L;  1F93 A;  1IBA A;  3BUE A;  4QIW D;  5IP7 K;  3TFJ A;  2WAQ L;  4KMA A;  4P9S A;  3HOX C;  3GIR A;  4PAA A;  4XCH A;  2KPU A;  5TMC A;  3L4K A;  4GZY A;  2WB1 L;  3T00 A;  4P5B A;  5C3E C;  4C3J K;  1AB4 A;  1WQG A;  3HOY C;  4C2M K;  4A3E K;  1J98 A;  4KAS A;  4YFK A;  4QJV A;  4GTD A;  3AD9 C;  4IOC S;  4WJ4 A;  1DCP A;  3TTG A;  3HOZ C;  4GTL A;  2W7V A;  3AD7 C;  1INN A;  1ZVU A;  1WQH A;  3T02 A;  1EH1 A;  4A3M K;  4MEY A;  4KMD A;  5EGE A;  3HXA A;  2E2J K;  2KQ1 A;  2GSN A;  3HOW K;  2JA5 K;  1VRQ C;  3GTL A;  2PMZ D;  2A68 A;  1VLO A;  1B4A A;  1F9N A;  4KAT A;  3S1Q C;  1TWF A;  2B63 A;  2CW0 A;  1I3Q A;  1USO A;  2ZUE A;  2RGR A;  3S1Q K;  2GSU A;  4A3B C;  4KN4 A;  1WCM A;  3ORE A;  2JA8 K;  3HKZ L;  4A3B K;  3S1M C;  2ZFZ A;  4GTE A;  4KMU A;  2Y0S L;  4GTF A;  3GTJ K;  4GTC A;  1EK8 A;  2NVX A;  4BY7 K;  3GSI A;  5DM7 S;  3GTQ C;  1VGX A;  4BY1 C;  1O2B A;  4P5A A;  3GTQ K;  4C45 A;  4AYB D;  4BY1 K;  1IW7 A;  1ZBS A;  2A6E A;  1I50 K;  5IOT A;  1JQW A;  3GTP A;  4G7O A;  2P8T A;  3GTL C;  5TJ3 A;  2NVQ C;  3S0X A;  4XLP A;  3GTL K;  1TWF C;  2B63 C;  4KM9 A;  4WIL A;  1I3Q C;  2JA6 K;  1TWF K;  1TWA C;  1R9T A;  5C44 C;  2B63 K;  4KAR A;  1WCM C;  1TWH K;  3S2D C;  1TWA K;  4BXX C;  2FQT A;  3BP8 C;  1WCM K;  3HOV K;  2YU9 A;  3H0G K;  4BXX K;  4QJV B;  2R93 A;  1YNN A;  3EQL A;  1KQ4 A;  4ILD A;  2R7Z C;  1WOS A;  2NVX C;  2R7Z K;  2NVX K;  4WCE S;  4IOA S;  4C3I C;  3FOF A;  2BE5 A;  3LPX A;  3QX3 A;  2E2I A;  4WJ3 M;  4IO9 S;  5M3M K;  4BLB A;  3GTP C;  1V5V A;  4J3N A;  3SZZ A;  2V6U A;  3PO2 K;  3CQZ A;  3GTM C;  4A3D C;  1Y1W K;  3GTM K;  3AQO A;  1FEU A;  3GTK A;  2V6T A;  1R9T C;  3M4O C;  1O26 A;  4A3I K;  1X31 C;  3M4O K;  1SFO A;  4G7H A;  2YU9 C;  4XLN A;  2R93 C;  3PIP S;  4DDQ A;  2YU9 K;  3A8I A;  2A69 A;  5L46 A;  3HOX K;  1Y1V A;  4NOI A;  1TWC A;  3PIO S;  5C3E K;  3H3V D;  3HOY K;  2E2I C;  2WAQ D;  4A3J C;  4G0W A;  2E2I K;  2WB1 D;  4KC6 A;  4BLA A;  1XZP B;  5CJ9 A;  4KM8 A;  3A8K A;  2XCQ A;  1TWG A;  4OIP A;  3GTK C;  2EBB A;  4C3H C;  3LYW A;  3CF5 S;  3HOZ K;  1IQ0 A;  4C3H K;  4OIN A;  3Q3Q A;  4GFQ A;  2VUM A;  1SFO C;  3FKI A;  1RU0 A;  2ZUF A;  4XSX A;  1SFO K;  5IYB C;  3AD8 C;  3GTG A;  4A3F C;  5IYB K;  1EQR A;  4A3F K;  1Y1V C;  1TWC C;  3PO3 C;  3ADA C;  1XZQ A;  1TWC K;  3PO3 K; 
#chains in the Genus database with same CATH homology
 3CQZ C;  4LLG A;  3WOD A;  3M3Y C;  4G7O A;  2PMZ L;  5M5Y K;  5IYD C;  5C4X C;  2PPB A;  4BBR K;  2JA7 K;  3I4N K;  3GTL C;  3CQZ K;  3M3Y K;  2NVQ C;  4C3J C;  5C4X K;  5IYD K;  4XLP A;  3GTL K;  1TWF C;  2B63 C;  2R92 C;  3PO2 C;  5C4J C;  1I3Q C;  5TMF A;  4Y52 C;  4C2M C;  4A3E C;  1Y1W C;  3S14 C;  2JA6 K;  3GTK K;  1TWF K;  1TWA C;  2B63 K;  4YG2 A;  5C44 C;  2R92 K;  5C4J K;  1WCM C;  1TWH K;  3PO3 K;  4Y52 K;  3S15 C;  3S2D C;  1TWA K;  4BXX C;  4X6A K;  1TWG C;  1WCM K;  1I6H C;  3HOV K;  3S15 K;  3H0G K;  4BXX K;  3HKZ D;  1TWG K;  3K7A C;  4BBS C;  4QJV B;  5M3F K;  1I6H K;  1YNN A;  3EQL A;  1K83 C;  4A3I C;  2O5I A;  2R7Z C;  1XPP A;  3K7A K;  2NVT C;  4BBS K;  3S1M K;  3I4M C;  2NVX C;  2VUM C;  3RZD C;  1K83 K;  3H3V L;  2R7Z K;  2Y0S D;  2NVT K;  5D4D A;  1Y1V K;  3FKI C;  3S17 C;  2NVX K;  2VUM K;  4ZH4 A;  4QIW D;  4A3G C;  5IP7 K;  3RZD K;  3I4M K;  4MQ9 A;  3GTG C;  4Q5S A;  2WAQ L;  3HOU C;  3S17 K;  3HOX C;  5FLM C;  4C3I C;  4A3M C;  3S2H C;  2BE5 A;  3GTG K;  3HOU K;  5TMC A;  4XSZ A;  1SMY A;  4GZY A;  2WB1 L;  5M3M K;  5FLM K;  4A3K C;  2NVQ K;  3GTP C;  5C3E C;  2E2J C;  4A93 C;  3S1R C;  4C3J K;  3S2H K;  4OIR A;  3HOW C;  4A3K K;  4A93 K;  2JA5 C;  3HOY C;  3PO2 K;  1I3Q K;  3S14 K;  4C2M K;  3GTM C;  4A3D C;  4A3E K;  1Y1W K;  4LJZ A;  5C44 K;  2PA8 L;  4Y7N C;  4YFK A;  3GTM K;  3DXJ A;  3S2D K;  4QJV A;  5M5W K;  2JA8 C;  1R9T C;  4LK1 A;  3M4O C;  2E2H C;  4A3I K;  3M4O K;  2E2H K;  1I6V A;  4G7H A;  2YU9 C;  3HOZ C;  4AYB L;  3GTJ C;  2NVY C;  4XLN A;  2R93 C;  3RZO C;  3FKI K;  2YU9 K;  4A3G K;  2A69 A;  4BY7 C;  5M5X K;  3RZO K;  3HOX K;  4KN7 A;  4C3I K;  4A3M K;  4YFX A;  4NOI A;  3GTO C;  4YFN A;  4MEY A;  4Q4Z A;  1YNJ A;  1ZYR A;  3GTO K;  3GTP K;  5C3E K;  2E2J K;  3H3V D;  3S1R K;  3HOW K;  1HQM A;  1I50 C;  2A6H A;  3S1N C;  2JA5 K;  2E2I C;  3HOY K;  2PMZ D;  4A3D K;  2A68 A;  2WAQ D;  4A3J C;  3S1N K;  5IYC C;  2E2I K;  3S1Q C;  4Y7N K;  4OIQ A;  4G7Z A;  2CW0 A;  3I4N C;  4BBR C;  2WB1 D;  5IYC K;  3S1Q K;  4A3B C;  4LK0 A;  4KN4 A;  2JA8 K;  3HKZ L;  1R9T K;  4OIO A;  2O5J A;  4A3B K;  4JK1 A;  4OIP A;  5IP9 C;  3GTK C;  2JA6 C;  3S1M C;  4C3H C;  3S16 C;  2PA8 D;  4KMU A;  1TWH C;  5IP9 K;  2Y0S L;  3GTJ K;  3HOZ K;  4C3H K;  2NVY K;  2R93 K;  4X6A C;  4QIW L;  3S16 K;  4OIN A;  3HOV C;  1SFO C;  3H0G C;  4BY7 K;  4A3L C;  3GTQ C;  4XSX A;  1SFO K;  5IYB C;  4BY1 C;  5FJ8 K;  4A3L K;  4A3F C;  4A3C C;  3GTQ K;  1BDF A;  4AYB D;  5IYB K;  4BY1 K;  1IW7 A;  2A6E A;  1Y1V C;  4A3F K;  1I50 K;  4A3C K;  1TWC C;  5IP7 C;  3PO3 C;  4MEX A;  4A3J K;  1TWC K;  2JA7 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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