3GTJC

Backtracked rna polymerase ii complex with 13mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtjC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtjC01
4G7HA 4A3CC 1I6VA 4C3JC 4A3IC 2NVXC 4BBSC 3S1NK 1TWFK 4Y52K 5IP7C 4OINA 2E2IC 5C4JK 1SMYA 1TWAK 3GTJK 3GTLC 5FLMC 3HOZK 3HKZD 3EQLA 2O5JA 3I4MC 3FKIK 3S2HK 2O5IA 3GTQC 4KN7A 4A3BC 3HOVK 3H3VL 4XSZA 1ZYRA 4LJZA 2JA7C 5IP9K 3S14C 4C3IK 4A3DK 1I50C 4C2MK 2Y0SD 4X6AK 5IP9C 4A3DC 3S1RK 2JA5K 3S14K 4A3MC 3S17K 4BBRC 1TWGK 4BXXC 4MEXA 4Q4ZA 1K83K 4A3BK 5IYCK 4ZH4A 4OIOA 1K83C 4C2MC 2WB1D 5M5WK 5IP7K 3S1MK 5C4JC 2NVQC 2JA6C 4A3IK 4BBSK 5FLMK 5C44K 4C3HK 2E2HC 5TMCA 2NVTC 2A69A 1YNJA 1SFOC 3RZOC 3S15C 1TWAC 3GTJC 3HOVC 2PA8D 4OIQA 2PMZL 4LK0A 1Y1VC 4C3HC 4BY1C 3GTQK 3GTMK 3I4NK 3RZOK 3HOZC 4A3EC 1TWFC 2WAQD 5IYDC 3S16C 3I4NC 5C3EC 4GZYA 5IYBK 2WB1L 2R92K 1XPPA 3M3YK 2WAQL 5IYBC 3M3YC 4OIPA 1I3QK 2R93C 2YU9K 4BY7C 1R9TC 1HQMA 4YFXA 3S1NC 2PPBA 4C3JK 4NOIA 4OIRA 3I4MK 2VUMC 2JA8K 5M3FK 5M5YK 3M4OK 4YG2A 4Y7NC 3HOWC 2BE5A 2NVYK 3PO2K 4A93C 2JA7K 3M4OC 4G7OA 4G7ZA 4A3JK 1TWCC 3GTMC 4A3LK 3RZDK 4BXXK 1WCMK 3CQZC 3PO3C 5C44C 4Q5SA 3HKZL 3HOYC 3CQZK 1BDFA 3S1QC 5C4XC 1I50K 3S2DC 5FJ8K 2E2JK 1IW7A 3FKIC 2NVQK 2YU9C 3H0GK 4A3JC 4LK1A 2A6HA 4XLNA 2R7ZC 4Y52C 2NVXK 3S15K 4QJVB 2R7ZK 2NVYC 3HOWK 1TWHC 2B63C 1Y1WK 3HOUC 3GTKK 1R9TK 3S2DK 4QIWL 4LLGA 1TWGC 1TWHK 4A3LC 4C3IC 1TWCK 3GTKC 1SFOK 2B63K 3S1MC 1YNNA 1I3QC 3GTOC 2CW0A 4X6AC 1WCMC 3PO2C 3S16K 5C3EK 4A3FC 2JA8C 2VUMK 3GTGK 3K7AK 3HOXC 4A93K 5M3MK 2A6EA 3WODA 3GTOK 3DXJA 4QJVA 2R92C 2PA8L 4AYBL 2PMZD 3HOUK 3H0GC 5D4DA 3GTGC 4JK1A 2A68A 4KMUA 2JA5C 3S2HC 4XSXA 4AYBD 1I6HC 5C4XK 4MQ9A 2NVTK 3S1QK 3GTLK 1Y1VK 4BY1K 2JA6K 4KN4A 4A3KK 3PO3K 4MEYA 3K7AC 3HOYK 4BY7K 2R93K 3S17C 4A3MK 4BBRK 4A3GC 5TMFA 1I6HK 3RZDC 4A3GK 5IYDK 5IYCC 4YFNA 4A3EK 2E2IK 3GTPC 4XLPA 3HOXK 2Y0SL 4QIWD 2E2JC 1Y1WC 4YFKA 2E2HK 3GTPK 4Y7NK 4A3KC 4A3CK 4A3FK 3S1RC 3H3VD 5M5XK
chains in the Genus database with same CATH superfamily
4A3CC 4GTLA 5IP7C 4OINA 2XCRB 4KM8A 1VLOA 5FLMC 2GSNA 2R92A 3HKZD 3EQLA 1I50A 2JA7C 1J98A 1O28A 4BXXC 4WILA 1VGXA 1FEUA 4O2DA 4ZH4A 3PIPS 1K83A 1WOSA 5C4JC 1J6WA 3H0GA 1WORA 3TFIA 4WJ4A 1SFOC 1YCLA 3GTMK 5IYDK 4BY1C 1TWFC 4GZYA 5IYDC 2WB1L 1XPPA 1VJEA 1EH1A 4OIPA 3G4CA 1HQMA 4C45A 2PPBA 3I4MK 2JA8K 1HI9A 3M4OK 4Y7NC 2NVYK 2BE5A 2CFAB 3M4OC 5CHPA 3CF5S 4G7ZA 3AD9C 1EQRA 3HXAA 3RZDK 3PO3C 4Q5SA 1JVIA 1C0AA 1Y1VA 3AQPA 3HOYC 1ZBSA 1BDFA 5FJ8K 3PO3K 3S2DC 1IW7A 2R7ZC 1I3QA 4KB2A 2NVYC 1TWAA 3GTJA 1TWHC 3GTKK 1ISEA 4QIWL 1TWGC 1TWHK 2V6SA 4C3IC 4BKWA 4WFBS 3GTKC 1YNNA 2D6FC 2ZUEA 3PO2C 4P5AA 1USMA 4A93K 1F7UA 4ILDA 2A6EA 3WODA 3GTOK 3DXJA 3V4GA 2R92C 1ZQ1C 3HOUK 1IS1A 5C4XK 3S1QK 3CAGA 4KASA 4KN4A 4KMAA 4KAWX 2GAHC 3GTGA 4DDQA 5HQHA 3AQOA 4WF9S 3HOXK 4QIWD 1Y1WC 5TJ3A 1TWCA 1I6VA 4C3JC 3Q3QA 2E2IC 5C4JK 2V6UA 3OEPA 3FOFA 3SZZA 2ZJPS 3HOZK 1BJTA 4KB4A 3OPFA 3GTQC 4A3BC 4KN7A 3HOVK 4WJ3M 3H3VL 1ZYRA 4LJZA 3CQZA 3S14C 2RH6A 4C2MK 4P9SA 2Y0SD 3A8JA 5IP9C 3S14K 3S17K 4BBRC 4MEXA 1DCHA 2E2IA 5IP7K 3A8KA 4G0UA 1DD5A 2E2HC 5TMCA 2PMZL 3GEIA 4C3IK 5M5WK 1TWAC 3GTJC 4A3KK 4OIQA 3I4NK 4C3HC 3RZOK 4A3EC 2WAQD 4M1XA 5IYBK 5C3EC 2R92K 1WIHA 1O27A 2V6TA 2WAQL 3GTMA 2ZUFA 2R93C 2YU9K 4BY7C 1AB4A 4YFXA 3S1NC 2VUMA 4OIRA 3HOWC 3PO2K 4A93C 2JA7K 4G7OA 1EK8A 1TWCC 4A3JK 4A3LK 1WCMK 3CQZC 1L0WA 3TTGA 1I50K 3GTLA 1BGWA 1O2BA 3FKIC 3TFJA 5JVOA 3H0GK 4LK1A 4XLNA 3AD8C 3IPJA 4Y52C 2NVXK 3GEEA 2XCQA 3PIOS 1V5VA 1R9TK 3S2DK 3N3YA 1F9NA 4A3LC 1TWCK 3BP8C 3L4KA 1SFOK 2B63K 1I3QC 3LPXA 1WCMC 1UV7A 3S16K 1TWHA 2JA8C 4GTCA 2L5NA 4GTEA 2GSOA 4QJVA 4U67S 1B4AA 4AH6A 2PMZD 1YX2A 5D4DA 4LOWA 2JA5C 4KMUA 3VA7A 1F7VA 1I6HC 3T02A 1XZQB 4GT9A 3BP3A 1WQGA 4BY1K 4MEYA 3K7AC 3S17C 1O2FB 4A3GC 2CFAA 4YFNA 4XLPA 5CJ9A 2KPUA 4YFKA 3GTPK 4A3CK 4A3FK 3H3VD 1XZPA 5EGHA 3S1NK 4IO9S 4A3IC 4BBSC 4LR2A 1ZVUA 2NVYA 1SMYA 1TWAK 2ZJRS 3GTJK 1Y1WA 2KWAA 3GTLC 2YU9A 1PJ6A 2O5JA 3S2HK 2O5IA 5EGEA 1JQWA 3L4JA 4KC6A 4XSZA 2PHCB 4A3DK 1I50C 2ZFZA 4LQYA 4X6AK 4A3DC 1PJ5A 4PABA 1RU0A 3S1RK 1VH2A 1TWGK 3BUEA 3G4AA 3GTOA 1WCMA 2GAGC 1K83K 3LAJA 4BLBA 1K83C 4C2MC 2EBBA 3QX3A 2WB1D 3S1MK 1DCOA 2GSUA 2P5MA 1XZQA 2R93A 3MMLB 3LYWA 1YNJA 5HL8A 3HOVC 1X31C 3OREA 3GTQK 1SFOA 4A3BK 1Y1VC 1TWFA 2ZJQS 3HOZC 2W7VA 3S16C 2RGRA 3M3YK 3M3YC 2E2HA 1I3QK 4WFAS 1R9TC 4C3JK 5M3FK 1XZPB 1VRQC 3A8IA 1WOOA 3JSTA 3T01A 2KQ1A 3GTMC 3AD7C 3LAPA 2JA7A 5C44C 3HKZL 5IOTA 2NVQK 2E2JK 4KMHA 1IBAA 2JA6A 4A3JC 3S15K 4QJVB 2R7ZK 5IOSA 3HOUC 4RMFA 1INNA 5C3EK 2B63A 4A3FC 2VUMK 3GTGK 4KM9A 1J6VA 3ADAC 1J6XA 1ZXOA 1USOA 4FM9A 3H0GC 2L3UA 3S2HC 4XSXA 4AYBD 2NVTK 3GTLK 1O29A 5JVGS 1JOEA 4BLAA 3N0BA 1KQ4A 2FQTA 1I6HK 2Y0SL 4KDDA 5M5XK 4G7HA 2NVXC 4Y52K 4GTAA 1TWFK 5JFEA 3N0CA 4G0WA 3SZYA 5HL7S 4G0VA 3FKIK 3I4MC 3AH5A 1WOPA 1WQFA 5IP9K 2JA5K 1O26A 4A3MC 1BS2A 4Q4ZA 4GFQA 3NUHA 4KATA 5IYCK 3FHZA 2FQOA 4OIOA 1TWGA 2XCOA 4GTDA 1PJ7A 2NVQC 2JA6C 4A3IK 5DM6S 4BBSK 1F93A 2R7ZA 5FLMK 5C44K 5L46A 1R9TA 5DM7S 2NVTC 3RZOC 2A69A 4J3NA 4C3HK 3S15C 2PA8D 4PAAA 4LK0A 3GDZA 3I4NC 4GTFA 5IYBC 1B4BA 2NVXA 1G51A 3TFHA 2P8TA 4NOIA 2VUMC 1IL2A 5M5YK 4YG2A 1WSVA 4FZBA 1IQ0A 4BXXK 4KARA 4IOAS 3CQZK 3S1QC 5C4XC 1O2AA 2YU9C 3ERED 1WSRA 3GTKA 2A6HA 3DLLS 3GEHA 3HOWK 3GTQA 2B63C 1XXBA 1Y1WK 4IOCS 4LLGA 3S1MC 3GTOC 2CW0A 4X6AC 2Y3PA 4P5BA 3FOEA 3K7AK 3HOXC 1GE9A 1WQHA 1XXAA 5M3MK 3GIRA 1DCPA 3FKIA 4GTBA 4XCHA 2PA8L 1O24A 4AYBL 3T00A 3GTGC 4JK1A 2A68A 2JH3A 3S0XA 4MQ9A 2JA5A 5IOQA 4WFNS 1EI6A 2KXYA 1Y1VK 2JA6K 2R93K 3HOYK 4BY7K 4A3MK 4BBRK 5IORA 5E68A 5TMFA 4KMDA 1EFWA 3RZDC 4WCES 3GSIA 4A3GK 3GTPA 5IYCC 4A3EK 2E2IK 3GTPC 1XXCA 1O25A 5JVHS 2E2JC 2E2HK 4Y7NK 4A3KC 1IE0A 3S1RC
chains in the Genus database with same CATH topology
4G7HA 4A3CC 1I6VA 4C3JC 4A3IC 2NVXC 4BBSC 3S1NK 1TWFK 4Y52K 5IP7C 4OINA 2E2IC 5C4JK 1SMYA 1TWAK 3GTJK 3GTLC 5FLMC 3HOZK 3HKZD 3EQLA 2O5JA 3I4MC 3FKIK 3S2HK 2O5IA 3GTQC 4KN7A 4A3BC 3HOVK 3H3VL 4XSZA 1ZYRA 4LJZA 2JA7C 5IP9K 3S14C 4C3IK 4A3DK 1I50C 4C2MK 2Y0SD 4X6AK 5IP9C 4A3DC 3S1RK 2JA5K 3S14K 4A3MC 3S17K 4BBRC 1TWGK 4BXXC 4MEXA 4Q4ZA 1K83K 4A3BK 5IYCK 4ZH4A 4OIOA 1K83C 4C2MC 2WB1D 5M5WK 5IP7K 3S1MK 5C4JC 2NVQC 2JA6C 4A3IK 4BBSK 5FLMK 5C44K 4C3HK 2E2HC 5TMCA 2NVTC 2A69A 1YNJA 1SFOC 3RZOC 3S15C 1TWAC 3GTJC 3HOVC 2PA8D 4OIQA 2PMZL 4LK0A 1Y1VC 4C3HC 4BY1C 3GTQK 3GTMK 3I4NK 3RZOK 3HOZC 4A3EC 1TWFC 2WAQD 5IYDC 3S16C 3I4NC 5C3EC 4GZYA 5IYBK 2WB1L 2R92K 1XPPA 3M3YK 2WAQL 5IYBC 3M3YC 4OIPA 1I3QK 2R93C 2YU9K 4BY7C 1R9TC 1HQMA 4YFXA 3S1NC 2PPBA 4C3JK 4NOIA 4OIRA 3I4MK 2VUMC 2JA8K 5M3FK 5M5YK 3M4OK 4YG2A 4Y7NC 3HOWC 2BE5A 2NVYK 3PO2K 4A93C 2JA7K 3M4OC 4G7OA 4G7ZA 4A3JK 1TWCC 3GTMC 4A3LK 3RZDK 4BXXK 1WCMK 3CQZC 3PO3C 5C44C 4Q5SA 3HKZL 3HOYC 3CQZK 1BDFA 3S1QC 5C4XC 1I50K 3S2DC 5FJ8K 2E2JK 1IW7A 3FKIC 2NVQK 2YU9C 3H0GK 4A3JC 4LK1A 2A6HA 4XLNA 2R7ZC 4Y52C 2NVXK 3S15K 4QJVB 2R7ZK 2NVYC 3HOWK 1TWHC 2B63C 1Y1WK 3HOUC 3GTKK 1R9TK 3S2DK 4QIWL 4LLGA 1TWGC 1TWHK 4A3LC 4C3IC 1TWCK 3GTKC 1SFOK 2B63K 3S1MC 1YNNA 1I3QC 3GTOC 2CW0A 4X6AC 1WCMC 3PO2C 3S16K 5C3EK 4A3FC 2JA8C 2VUMK 3GTGK 3K7AK 3HOXC 4A93K 5M3MK 2A6EA 3WODA 3GTOK 3DXJA 4QJVA 2R92C 2PA8L 4AYBL 2PMZD 3HOUK 3H0GC 5D4DA 3GTGC 4JK1A 2A68A 4KMUA 2JA5C 3S2HC 4XSXA 4AYBD 1I6HC 5C4XK 4MQ9A 2NVTK 3S1QK 3GTLK 1Y1VK 4BY1K 2JA6K 4KN4A 4A3KK 3PO3K 4MEYA 3K7AC 3HOYK 4BY7K 2R93K 3S17C 4A3MK 4BBRK 4A3GC 5TMFA 1I6HK 3RZDC 4A3GK 5IYDK 5IYCC 4YFNA 4A3EK 2E2IK 3GTPC 4XLPA 3HOXK 2Y0SL 4QIWD 2E2JC 1Y1WC 4YFKA 2E2HK 3GTPK 4Y7NK 4A3KC 4A3CK 4A3FK 3S1RC 3H3VD 5M5XK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4G7H A;  4A3C C;  1I6V A;  4C3J C;  4A3I C;  2NVX C;  4BBS C;  3S1N K;  1TWF K;  4Y52 K;  5IP7 C;  4OIN A;  2E2I C;  5C4J K;  1SMY A;  1TWA K;  3GTJ K;  3GTL C;  5FLM C;  3HOZ K;  3HKZ D;  3EQL A;  2O5J A;  3I4M C;  3FKI K;  3S2H K;  2O5I A;  3GTQ C;  4KN7 A;  4A3B C;  3HOV K;  3H3V L;  4XSZ A;  1ZYR A;  4LJZ A;  2JA7 C;  5IP9 K;  3S14 C;  4C3I K;  4A3D K;  1I50 C;  4C2M K;  2Y0S D;  4X6A K;  5IP9 C;  4A3D C;  3S1R K;  2JA5 K;  3S14 K;  4A3M C;  3S17 K;  4BBR C;  1TWG K;  4BXX C;  4MEX A;  4Q4Z A;  1K83 K;  4A3B K;  5IYC K;  4ZH4 A;  4OIO A;  1K83 C;  4C2M C;  2WB1 D;  5M5W K;  5IP7 K;  3S1M K;  5C4J C;  2NVQ C;  2JA6 C;  4A3I K;  4BBS K;  5FLM K;  5C44 K;  4C3H K;  2E2H C;  5TMC A;  2NVT C;  2A69 A;  1YNJ A;  1SFO C;  3RZO C;  3S15 C;  1TWA C;  3GTJ C;  3HOV C;  2PA8 D;  4OIQ A;  2PMZ L;  4LK0 A;  1Y1V C;  4C3H C;  4BY1 C;  3GTQ K;  3GTM K;  3I4N K;  3RZO K;  3HOZ C;  4A3E C;  1TWF C;  2WAQ D;  5IYD C;  3S16 C;  3I4N C;  5C3E C;  4GZY A;  5IYB K;  2WB1 L;  2R92 K;  1XPP A;  3M3Y K;  2WAQ L;  5IYB C;  3M3Y C;  4OIP A;  1I3Q K;  2R93 C;  2YU9 K;  4BY7 C;  1R9T C;  1HQM A;  4YFX A;  3S1N C;  2PPB A;  4C3J K;  4NOI A;  4OIR A;  3I4M K;  2VUM C;  2JA8 K;  5M3F K;  5M5Y K;  3M4O K;  4YG2 A;  4Y7N C;  3HOW C;  2BE5 A;  2NVY K;  3PO2 K;  4A93 C;  2JA7 K;  3M4O C;  4G7O A;  4G7Z A;  4A3J K;  1TWC C;  3GTM C;  4A3L K;  3RZD K;  4BXX K;  1WCM K;  3CQZ C;  3PO3 C;  5C44 C;  4Q5S A;  3HKZ L;  3HOY C;  3CQZ K;  1BDF A;  3S1Q C;  5C4X C;  1I50 K;  3S2D C;  5FJ8 K;  2E2J K;  1IW7 A;  3FKI C;  2NVQ K;  2YU9 C;  3H0G K;  4A3J C;  4LK1 A;  2A6H A;  4XLN A;  2R7Z C;  4Y52 C;  2NVX K;  3S15 K;  4QJV B;  2R7Z K;  2NVY C;  3HOW K;  1TWH C;  2B63 C;  1Y1W K;  3HOU C;  3GTK K;  1R9T K;  3S2D K;  4QIW L;  4LLG A;  1TWG C;  1TWH K;  4A3L C;  4C3I C;  1TWC K;  3GTK C;  1SFO K;  2B63 K;  3S1M C;  1YNN A;  1I3Q C;  3GTO C;  2CW0 A;  4X6A C;  1WCM C;  3PO2 C;  3S16 K;  5C3E K;  4A3F C;  2JA8 C;  2VUM K;  3GTG K;  3K7A K;  3HOX C;  4A93 K;  5M3M K;  2A6E A;  3WOD A;  3GTO K;  3DXJ A;  4QJV A;  2R92 C;  2PA8 L;  4AYB L;  2PMZ D;  3HOU K;  3H0G C;  5D4D A;  3GTG C;  4JK1 A;  2A68 A;  4KMU A;  2JA5 C;  3S2H C;  4XSX A;  4AYB D;  1I6H C;  5C4X K;  4MQ9 A;  2NVT K;  3S1Q K;  3GTL K;  1Y1V K;  4BY1 K;  2JA6 K;  4KN4 A;  4A3K K;  3PO3 K;  4MEY A;  3K7A C;  3HOY K;  4BY7 K;  2R93 K;  3S17 C;  4A3M K;  4BBR K;  4A3G C;  5TMF A;  1I6H K;  3RZD C;  4A3G K;  5IYD K;  5IYC C;  4YFN A;  4A3E K;  2E2I K;  3GTP C;  4XLP A;  3HOX K;  2Y0S L;  4QIW D;  2E2J C;  1Y1W C;  4YFK A;  2E2H K;  3GTP K;  4Y7N K;  4A3K C;  4A3C K;  4A3F K;  3S1R C;  3H3V D;  5M5X K; 
#chains in the Genus database with same CATH topology
 4A3C C;  4GTL A;  5IP7 C;  4OIN A;  2XCR B;  4KM8 A;  1VLO A;  5FLM C;  2GSN A;  2R92 A;  3HKZ D;  3EQL A;  1I50 A;  2JA7 C;  1J98 A;  1O28 A;  4BXX C;  4WIL A;  1VGX A;  1FEU A;  4O2D A;  4ZH4 A;  3PIP S;  1K83 A;  1WOS A;  5C4J C;  1J6W A;  3H0G A;  1WOR A;  3TFI A;  4WJ4 A;  1SFO C;  1YCL A;  3GTM K;  5IYD K;  4BY1 C;  1TWF C;  4GZY A;  5IYD C;  2WB1 L;  1XPP A;  1VJE A;  1EH1 A;  4OIP A;  3G4C A;  1HQM A;  4C45 A;  2PPB A;  3I4M K;  2JA8 K;  1HI9 A;  3M4O K;  4Y7N C;  2NVY K;  2BE5 A;  2CFA B;  3M4O C;  5CHP A;  3CF5 S;  4G7Z A;  3AD9 C;  1EQR A;  3HXA A;  3RZD K;  3PO3 C;  4Q5S A;  1JVI A;  1C0A A;  1Y1V A;  3AQP A;  3HOY C;  1ZBS A;  1BDF A;  5FJ8 K;  3PO3 K;  3S2D C;  1IW7 A;  2R7Z C;  1I3Q A;  4KB2 A;  2NVY C;  1TWA A;  3GTJ A;  1TWH C;  3GTK K;  1ISE A;  4QIW L;  1TWG C;  1TWH K;  2V6S A;  4C3I C;  4BKW A;  4WFB S;  3GTK C;  1YNN A;  2D6F C;  2ZUE A;  3PO2 C;  4P5A A;  1USM A;  4A93 K;  1F7U A;  4ILD A;  2A6E A;  3WOD A;  3GTO K;  3DXJ A;  3V4G A;  2R92 C;  1ZQ1 C;  3HOU K;  1IS1 A;  5C4X K;  3S1Q K;  3CAG A;  4KAS A;  4KN4 A;  4KMA A;  4KAW X;  2GAH C;  3GTG A;  4DDQ A;  5HQH A;  3AQO A;  4WF9 S;  3HOX K;  4QIW D;  1Y1W C;  5TJ3 A;  1TWC A;  1I6V A;  4C3J C;  3Q3Q A;  2E2I C;  5C4J K;  2V6U A;  3OEP A;  3FOF A;  3SZZ A;  2ZJP S;  3HOZ K;  1BJT A;  4KB4 A;  3OPF A;  3GTQ C;  4A3B C;  4KN7 A;  3HOV K;  4WJ3 M;  3H3V L;  1ZYR A;  4LJZ A;  3CQZ A;  3S14 C;  2RH6 A;  4C2M K;  4P9S A;  2Y0S D;  3A8J A;  5IP9 C;  3S14 K;  3S17 K;  4BBR C;  4MEX A;  1DCH A;  2E2I A;  5IP7 K;  3A8K A;  4G0U A;  1DD5 A;  2E2H C;  5TMC A;  2PMZ L;  3GEI A;  4C3I K;  5M5W K;  1TWA C;  3GTJ C;  4A3K K;  4OIQ A;  3I4N K;  4C3H C;  3RZO K;  4A3E C;  2WAQ D;  4M1X A;  5IYB K;  5C3E C;  2R92 K;  1WIH A;  1O27 A;  2V6T A;  2WAQ L;  3GTM A;  2ZUF A;  2R93 C;  2YU9 K;  4BY7 C;  1AB4 A;  4YFX A;  3S1N C;  2VUM A;  4OIR A;  3HOW C;  3PO2 K;  4A93 C;  2JA7 K;  4G7O A;  1EK8 A;  1TWC C;  4A3J K;  4A3L K;  1WCM K;  3CQZ C;  1L0W A;  3TTG A;  1I50 K;  3GTL A;  1BGW A;  1O2B A;  3FKI C;  3TFJ A;  5JVO A;  3H0G K;  4LK1 A;  4XLN A;  3AD8 C;  3IPJ A;  4Y52 C;  2NVX K;  3GEE A;  2XCQ A;  3PIO S;  1V5V A;  1R9T K;  3S2D K;  3N3Y A;  1F9N A;  4A3L C;  1TWC K;  3BP8 C;  3L4K A;  1SFO K;  2B63 K;  1I3Q C;  3LPX A;  1WCM C;  1UV7 A;  3S16 K;  1TWH A;  2JA8 C;  4GTC A;  2L5N A;  4GTE A;  2GSO A;  4QJV A;  4U67 S;  1B4A A;  4AH6 A;  2PMZ D;  1YX2 A;  5D4D A;  4LOW A;  2JA5 C;  4KMU A;  3VA7 A;  1F7V A;  1I6H C;  3T02 A;  1XZQ B;  4GT9 A;  3BP3 A;  1WQG A;  4BY1 K;  4MEY A;  3K7A C;  3S17 C;  1O2F B;  4A3G C;  2CFA A;  4YFN A;  4XLP A;  5CJ9 A;  2KPU A;  4YFK A;  3GTP K;  4A3C K;  4A3F K;  3H3V D;  1XZP A;  5EGH A;  3S1N K;  4IO9 S;  4A3I C;  4BBS C;  4LR2 A;  1ZVU A;  2NVY A;  1SMY A;  1TWA K;  2ZJR S;  3GTJ K;  1Y1W A;  2KWA A;  3GTL C;  2YU9 A;  1PJ6 A;  2O5J A;  3S2H K;  2O5I A;  5EGE A;  1JQW A;  3L4J A;  4KC6 A;  4XSZ A;  2PHC B;  4A3D K;  1I50 C;  2ZFZ A;  4LQY A;  4X6A K;  4A3D C;  1PJ5 A;  4PAB A;  1RU0 A;  3S1R K;  1VH2 A;  1TWG K;  3BUE A;  3G4A A;  3GTO A;  1WCM A;  2GAG C;  1K83 K;  3LAJ A;  4BLB A;  1K83 C;  4C2M C;  2EBB A;  3QX3 A;  2WB1 D;  3S1M K;  1DCO A;  2GSU A;  2P5M A;  1XZQ A;  2R93 A;  3MML B;  3LYW A;  1YNJ A;  5HL8 A;  3HOV C;  1X31 C;  3ORE A;  3GTQ K;  1SFO A;  4A3B K;  1Y1V C;  1TWF A;  2ZJQ S;  3HOZ C;  2W7V A;  3S16 C;  2RGR A;  3M3Y K;  3M3Y C;  2E2H A;  1I3Q K;  4WFA S;  1R9T C;  4C3J K;  5M3F K;  1XZP B;  1VRQ C;  3A8I A;  1WOO A;  3JST A;  3T01 A;  2KQ1 A;  3GTM C;  3AD7 C;  3LAP A;  2JA7 A;  5C44 C;  3HKZ L;  5IOT A;  2NVQ K;  2E2J K;  4KMH A;  1IBA A;  2JA6 A;  4A3J C;  3S15 K;  4QJV B;  2R7Z K;  5IOS A;  3HOU C;  4RMF A;  1INN A;  5C3E K;  2B63 A;  4A3F C;  2VUM K;  3GTG K;  4KM9 A;  1J6V A;  3ADA C;  1J6X A;  1ZXO A;  1USO A;  4FM9 A;  3H0G C;  2L3U A;  3S2H C;  4XSX A;  4AYB D;  2NVT K;  3GTL K;  1O29 A;  5JVG S;  1JOE A;  4BLA A;  3N0B A;  1KQ4 A;  2FQT A;  1I6H K;  2Y0S L;  4KDD A;  5M5X K;  4G7H A;  2NVX C;  4Y52 K;  4GTA A;  1TWF K;  5JFE A;  3N0C A;  4G0W A;  3SZY A;  5HL7 S;  4G0V A;  3FKI K;  3I4M C;  3AH5 A;  1WOP A;  1WQF A;  5IP9 K;  2JA5 K;  1O26 A;  4A3M C;  1BS2 A;  4Q4Z A;  4GFQ A;  3NUH A;  4KAT A;  5IYC K;  3FHZ A;  2FQO A;  4OIO A;  1TWG A;  2XCO A;  4GTD A;  1PJ7 A;  2NVQ C;  2JA6 C;  4A3I K;  5DM6 S;  4BBS K;  1F93 A;  2R7Z A;  5FLM K;  5C44 K;  5L46 A;  1R9T A;  5DM7 S;  2NVT C;  3RZO C;  2A69 A;  4J3N A;  4C3H K;  3S15 C;  2PA8 D;  4PAA A;  4LK0 A;  3GDZ A;  3I4N C;  4GTF A;  5IYB C;  1B4B A;  2NVX A;  1G51 A;  3TFH A;  2P8T A;  4NOI A;  2VUM C;  1IL2 A;  5M5Y K;  4YG2 A;  1WSV A;  4FZB A;  1IQ0 A;  4BXX K;  4KAR A;  4IOA S;  3CQZ K;  3S1Q C;  5C4X C;  1O2A A;  2YU9 C;  3ERE D;  1WSR A;  3GTK A;  2A6H A;  3DLL S;  3GEH A;  3HOW K;  3GTQ A;  2B63 C;  1XXB A;  1Y1W K;  4IOC S;  4LLG A;  3S1M C;  3GTO C;  2CW0 A;  4X6A C;  2Y3P A;  4P5B A;  3FOE A;  3K7A K;  3HOX C;  1GE9 A;  1WQH A;  1XXA A;  5M3M K;  3GIR A;  1DCP A;  3FKI A;  4GTB A;  4XCH A;  2PA8 L;  1O24 A;  4AYB L;  3T00 A;  3GTG C;  4JK1 A;  2A68 A;  2JH3 A;  3S0X A;  4MQ9 A;  2JA5 A;  5IOQ A;  4WFN S;  1EI6 A;  2KXY A;  1Y1V K;  2JA6 K;  2R93 K;  3HOY K;  4BY7 K;  4A3M K;  4BBR K;  5IOR A;  5E68 A;  5TMF A;  4KMD A;  1EFW A;  3RZD C;  4WCE S;  3GSI A;  4A3G K;  3GTP A;  5IYC C;  4A3E K;  2E2I K;  3GTP C;  1XXC A;  1O25 A;  5JVH S;  2E2J C;  2E2H K;  4Y7N K;  4A3K C;  1IE0 A;  3S1R C; 
#chains in the Genus database with same CATH homology
 4G7H A;  4A3C C;  1I6V A;  4C3J C;  4A3I C;  2NVX C;  4BBS C;  3S1N K;  1TWF K;  4Y52 K;  5IP7 C;  4OIN A;  2E2I C;  5C4J K;  1SMY A;  1TWA K;  3GTJ K;  3GTL C;  5FLM C;  3HOZ K;  3HKZ D;  3EQL A;  2O5J A;  3I4M C;  3FKI K;  3S2H K;  2O5I A;  3GTQ C;  4KN7 A;  4A3B C;  3HOV K;  3H3V L;  4XSZ A;  1ZYR A;  4LJZ A;  2JA7 C;  5IP9 K;  3S14 C;  4C3I K;  4A3D K;  1I50 C;  4C2M K;  2Y0S D;  4X6A K;  5IP9 C;  4A3D C;  3S1R K;  2JA5 K;  3S14 K;  4A3M C;  3S17 K;  4BBR C;  1TWG K;  4BXX C;  4MEX A;  4Q4Z A;  1K83 K;  4A3B K;  5IYC K;  4ZH4 A;  4OIO A;  1K83 C;  4C2M C;  2WB1 D;  5M5W K;  5IP7 K;  3S1M K;  5C4J C;  2NVQ C;  2JA6 C;  4A3I K;  4BBS K;  5FLM K;  5C44 K;  4C3H K;  2E2H C;  5TMC A;  2NVT C;  2A69 A;  1YNJ A;  1SFO C;  3RZO C;  3S15 C;  1TWA C;  3GTJ C;  3HOV C;  2PA8 D;  4OIQ A;  2PMZ L;  4LK0 A;  1Y1V C;  4C3H C;  4BY1 C;  3GTQ K;  3GTM K;  3I4N K;  3RZO K;  3HOZ C;  4A3E C;  1TWF C;  2WAQ D;  5IYD C;  3S16 C;  3I4N C;  5C3E C;  4GZY A;  5IYB K;  2WB1 L;  2R92 K;  1XPP A;  3M3Y K;  2WAQ L;  5IYB C;  3M3Y C;  4OIP A;  1I3Q K;  2R93 C;  2YU9 K;  4BY7 C;  1R9T C;  1HQM A;  4YFX A;  3S1N C;  2PPB A;  4C3J K;  4NOI A;  4OIR A;  3I4M K;  2VUM C;  2JA8 K;  5M3F K;  5M5Y K;  3M4O K;  4YG2 A;  4Y7N C;  3HOW C;  2BE5 A;  2NVY K;  3PO2 K;  4A93 C;  2JA7 K;  3M4O C;  4G7O A;  4G7Z A;  4A3J K;  1TWC C;  3GTM C;  4A3L K;  3RZD K;  4BXX K;  1WCM K;  3CQZ C;  3PO3 C;  5C44 C;  4Q5S A;  3HKZ L;  3HOY C;  3CQZ K;  1BDF A;  3S1Q C;  5C4X C;  1I50 K;  3S2D C;  5FJ8 K;  2E2J K;  1IW7 A;  3FKI C;  2NVQ K;  2YU9 C;  3H0G K;  4A3J C;  4LK1 A;  2A6H A;  4XLN A;  2R7Z C;  4Y52 C;  2NVX K;  3S15 K;  4QJV B;  2R7Z K;  2NVY C;  3HOW K;  1TWH C;  2B63 C;  1Y1W K;  3HOU C;  3GTK K;  1R9T K;  3S2D K;  4QIW L;  4LLG A;  1TWG C;  1TWH K;  4A3L C;  4C3I C;  1TWC K;  3GTK C;  1SFO K;  2B63 K;  3S1M C;  1YNN A;  1I3Q C;  3GTO C;  2CW0 A;  4X6A C;  1WCM C;  3PO2 C;  3S16 K;  5C3E K;  4A3F C;  2JA8 C;  2VUM K;  3GTG K;  3K7A K;  3HOX C;  4A93 K;  5M3M K;  2A6E A;  3WOD A;  3GTO K;  3DXJ A;  4QJV A;  2R92 C;  2PA8 L;  4AYB L;  2PMZ D;  3HOU K;  3H0G C;  5D4D A;  3GTG C;  4JK1 A;  2A68 A;  4KMU A;  2JA5 C;  3S2H C;  4XSX A;  4AYB D;  1I6H C;  5C4X K;  4MQ9 A;  2NVT K;  3S1Q K;  3GTL K;  1Y1V K;  4BY1 K;  2JA6 K;  4KN4 A;  4A3K K;  3PO3 K;  4MEY A;  3K7A C;  3HOY K;  4BY7 K;  2R93 K;  3S17 C;  4A3M K;  4BBR K;  4A3G C;  5TMF A;  1I6H K;  3RZD C;  4A3G K;  5IYD K;  5IYC C;  4YFN A;  4A3E K;  2E2I K;  3GTP C;  4XLP A;  3HOX K;  2Y0S L;  4QIW D;  2E2J C;  1Y1W C;  4YFK A;  2E2H K;  3GTP K;  4Y7N K;  4A3K C;  4A3C K;  4A3F K;  3S1R C;  3H3V D;  5M5X K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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