3GTJC

Backtracked rna polymerase ii complex with 13mer rna
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
271
structure length
271
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQDKVNF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords DNA-directed RNA polymerase II subunit RPB1
publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
molecule tags Transcription, transferase/dna-rna hybrid
total genus 49
structure length 271
sequence length 271
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtjC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtjC01
2PPBA 3GTGC 3K7AC 2BE5A 3HOYC 3S1MC 4A3IC 4AYBL 3I4NK 1TWGK 4YFNA 4X6AC 1Y1VC 1ZYRA 1HQMA 5C44C 4A3KC 3H3VD 4A3MK 4Q4ZA 4A3EC 2R7ZK 5IYCC 3PO2K 2A6HA 4OIRA 2A68A 4OIOA 4MQ9A 3FKIC 5M5YK 4OIPA 1I6VA 3H3VL 4BY1K 4C3JK 3HOUK 3H0GK 2NVXC 4KN4A 4XLPA 3GTMC 3HOVC 4A3DK 3S1NK 1SFOK 3HKZL 4C3HC 3S16C 3RZOK 1I50K 5TMCA 4A3GK 2JA5C 3GTJK 2E2HK 3WODA 3GTPC 1SMYA 4A3LC 2E2IK 5IYDC 3S1QC 1I6HK 1BDFA 2NVQK 4BBRC 3HOWC 3S14K 4A3FK 4C3JC 4C2MC 2NVYC 2B63C 2O5IA 3S2DK 1WCMK 2Y0SL 3GTKK 2R93K 1R9TK 4QJVA 3GTQK 5C4XK 1K83K 3HOZK 2VUMC 4A3CK 4BY7K 5M5XK 4BBSK 2R92K 4Y7NK 4C3IK 5TMFA 1XPPA 1TWGC 4Y52K 4BXXK 3PO3K 4Q5SA 4YFKA 4LJZA 5C3EK 4KN7A 5IP9K 3GTLK 1TWAC 4KMUA 2E2JK 3S15K 2R7ZC 2NVTK 3PO2C 5M3MK 4A93C 3DXJA 1TWCC 4QIWD 3RZDC 1YNJA 1TWHK 2YU9K 3S1MK 3I4MC 2JA6K 5IP7K 4A3BC 5C4JC 3HOUC 3EQLA 3S1NC 4JK1A 4QIWL 2PMZD 3M4OC 3RZOC 1I50C 4YFXA 4MEXA 1TWFK 3S17K 5FJ8K 1I3QC 5M5WK 2JA8C 5FLMC 2E2IC 4A3JC 3S1RK 2JA7C 3M3YK 1I6HC 2WB1D 2NVQC 3GTOC 4OINA 2PMZL 2NVXK 3GTMK 3S14C 4LLGA 5IYBK 1WCMC 3I4NC 3GTKC 3S16K 4G7OA 5M3FK 3CQZK 1R9TC 3GTQC 3HOZC 5C4XC 3HOXK 2JA5K 2WB1L 3GTPK 4LK0A 4BY7C 1Y1WK 3S2HK 4A3MC 4Y7NC 3S1QK 2A6EA 4ZH4A 4C3IC 2PA8D 2B63K 4G7HA 4Y52C 3GTGK 2NVYK 5C3EC 3K7AK 3HOYK 4A3IK 2E2JC 3S15C 4BY1C 4X6AK 1Y1VK 2NVTC 2PA8L 5C44K 4XSXA 3H0GC 4A3KK 4A3EK 4A3DC 1TWHC 1SFOC 2YU9C 5IYCK 2JA6C 5IP7C 3FKIK 4A3GC 4QJVB 1TWAK 3GTJC 2E2HC 4G7ZA 1IW7A 3S17C 1TWFC 4A93K 3HKZD 4A3FC 1TWCK 3RZDK 3HOVK 4LK1A 3S2DC 4C3HK 2CW0A 2A69A 3S1RC 3I4MK 3M3YC 2WAQD 2R93C 4A3BK 5C4JK 1K83C 4A3CC 4MEYA 4A3LK 4BBSC 2R92C 4YG2A 5IYDK 5IYBC 4NOIA 3M4OK 4BBRK 1YNNA 3HOWK 3CQZC 4BXXC 3PO3C 4OIQA 4AYBD 2Y0SD 3HOXC 4XLNA 4GZYA 1I3QK 2WAQL 5IP9C 1Y1WC 4XSZA 3GTLC 3S2HC 5D4DA 2O5JA 4C2MK 5FLMK 4A3JK 2JA7K 3GTOK 2JA8K 2VUMK
chains in the Genus database with same CATH superfamily
3HOYC 4YFNA 1Y1VC 5C44C 1WQHA 3H3VD 4A3MK 4Q4ZA 4A3EC 3H0GA 3HXAA 5JVGS 2YU9A 5HQHA 4OIRA 3FKIC 4OIPA 1EFWA 3GTJA 4BY1K 4WJ3M 1XZQA 1AB4A 3GTMC 1JOEA 3HOVC 3S16C 2E2HK 3GTPC 3IPJA 1BDFA 3T00A 1EQRA 4BBRC 1VH2A 1XXCA 3FOFA 1WCMK 2FQOA 3GTKK 3GTLA 2ZJRS 4GFQA 2XCOA 4BY7K 5M5XK 4Y7NK 4C3IK 3GTGA 4IOCS 3SZYA 1XZQB 4WF9S 4YFKA 5IP9K 1X31C 2E2JK 4M1XA 4P5BA 1TWFA 4KDDA 4QIWD 3S1MK 1YNJA 2YU9K 3I4MC 3FHZA 4A3BC 5C4JC 1O2AA 3EQLA 2NVXA 4MEXA 4LQYA 4AH6A 1I3QC 1KQ4A 2Y3PA 2JA5A 1EH1A 5FLMC 1WOPA 1VJEA 3GTOC 2PMZL 5IYBK 1WCMC 2B63A 3GTKC 3S0XA 4G7OA 5M3FK 5HL8A 2KPUA 4BY7C 1Y1VA 1FEUA 3ADAC 4Y7NC 1WOSA 4C3IC 2ZFZA 3PIOS 2L3UA 4G7HA 3GTGK 1ZXOA 1F7UA 3FKIA 1USOA 2E2JC 2V6SA 1F7VA 4X6AK 2PA8L 3H0GC 2YU9C 2ZUEA 5IYCK 1WQFA 4A3GC 1J98A 4WFAS 1TWAK 3GTJC 1O26A 1EK8A 1UV7A 4G7ZA 4A93K 1I50A 3RZDK 4LK1A 1J6VA 3N3YA 2JA7A 1IBAA 2RGRA 1V5VA 4MEYA 5IYDK 5IYBC 3GEIA 3PO3C 4GZYA 4C3JK 1R9TA 4XLNA 2B63K 3GTLC 4XSZA 3GTGC 3I4NK 1DCHA 4X6AC 1ZYRA 1XXBA 3G4AA 5IYCC 3PIPS 1O28A 3DLLS 1XZPA 2JA6A 1BJTA 2GAHC 2E2HA 3GEHA 2P5MA 3HOUK 2NVXC 1WSRA 4GTAA 1SFOK 1B4BA 1I50K 1WCMA 5HL7S 2JA5C 3WODA 5IYDC 3S1QC 1I6HK 2NVQK 4O2DA 4C3JC 3CQZA 4GTEA 2B63C 3S2DK 3OREA 1Y1WA 2R93K 1R9TK 1WSVA 1K83K 4A3CK 1XZPB 5IOQA 2R92K 4BBSK 5TMFA 4Y52K 3BUEA 5C3EK 4KM8A 4IOAS 4KMUA 5DM7S 3S15K 3SZZA 1F93A 3LYWA 3L4JA 2KQ1A 2JA6K 3HOUC 2PMZD 3M4OC 3S17K 1I50C 2JA8C 2W7VA 2JA7C 4KARA 1I6HC 2NVQC 1EI6A 3N0BA 3TFIA 3A8IA 2ZUFA 3CQZK 1R9TC 3LPXA 3HOXK 2KXYA 2WB1L 1O2BA 3FOEA 4BLBA 1Y1WK 3AQPA 3S2HK 4A3MC 4ZH4A 2PA8D 4Y52C 3CF5S 4GT9A 2NVYK 5C3EC 3S15C 1TWAA 4BY1C 2GSUA 2R7ZA 4XSXA 1J6WA 4KMDA 2ZJPS 2JA6C 3VA7A 1DCOA 1WORA 2E2HC 3NUHA 3GIRA 3S17C 2FQTA 3HKZD 1TWCK 5JVOA 4KMAA 1G51A 4PAAA 2E2IA 4A3LK 4WFNS 1J6XA 2EBBA 1YNNA 4BKWA 3HOWK 3CQZC 4OIQA 3HOXC 1WOOA 3GTQA 5IP9C 1Y1WC 3S2HC 4A3JK 2XCQA 5D4DA 3GEEA 4KB4A 2PPBA 2KWAA 5JFEA 1DCPA 3S1MC 1TWGK 1ZBSA 4KB2A 1F9NA 2R7ZK 1SFOA 5M5YK 4MQ9A 1HI9A 1I6VA 2L5NA 4KN4A 4XLPA 4A3DK 3S1NK 3N0CA 3HKZL 2GSOA 5IOSA 3LAJA 5TMCA 2R93A 4KASA 4G0WA 3TTGA 1K83A 1SMYA 4A3LC 2E2IK 1O24A 2R92A 4U67S 3HOWC 1VGXA 3QX3A 3S14K 4A3FK 1XXAA 4KM9A 4QJVA 3GTQK 1IQ0A 4DDQA 1TWGC 4BXXK 4Q5SA 4KN7A 1TWAC 4WFBS 3TFJA 2R7ZC 5E68A 4A93C 3RZDC 3TFHA 3S1NC 4JK1A 1VLOA 3JSTA 1C0AA 2ZJQS 4YFXA 3AQOA 5M5WK 5CJ9A 4KMHA 2E2IC 2WB1D 1IL2A 3GTMK 3S14C 1JVIA 4LLGA 3S16K 3I4NC 2GSNA 2NVYA 1O27A 3T01A 1JQWA 4GTFA 3GTQC 3A8KA 3GTPK 4LOWA 2VUMA 1ZQ1C 2GAGC 4XCHA 1YCLA 1WIHA 2V6TA 5JVHS 4GTCA 3K7AK 2CFAA 4A3IK 1PJ6A 4C45A 4P5AA 2P8TA 1USMA 1PJ5A 3AD9C 3G4CA 4A3KK 1O2FB 1SFOC 1O29A 1YX2A 1TWCA 1ISEA 2PHCB 3AD8C 1IE0A 3BP3A 1IW7A 5IOTA 3S2DC 1PJ7A 4C3HK 3I4MK 2R93C 4A3BK 5C4JK 1K83C 4A3CC 1BS2A 1WQGA 4WJ4A 3AH5A 4BBSC 2R92C 2CFAB 4NOIA 2RH6A 5EGEA 3V4GA 2XCRB 1TWGA 1BGWA 1I3QK 2Y0SD 2WAQL 4C2MK 5FLMK 1IS1A 1GE9A 3GTOK 2VUMK 4ILDA 3MMLB 3K7AC 2BE5A 4AYBL 4WCES 4A3IC 1HQMA 4BLAA 4A3KC 1TWHA 5L46A 3PO2K 2A6HA 2A68A 4OIOA 3H3VL 3H0GK 2JH3A 4C3HC 3RZOK 4A3GK 3GTJK 2O5IA 4C2MC 2NVYC 2Y0SL 3HOZK 4FM9A 5C4XK 2VUMC 1XPPA 3PO3K 4LJZA 3GTLK 4GTLA 2D6FC 4J3NA 4P9SA 2NVTK 3PO2C 5M3MK 3DXJA 3L4KA 1TWCC 1TWHK 3Q3QA 4G0UA 3A8JA 5IP7K 3LAPA 3GTMA 4GTDA 4QIWL 3RZOC 1TWFK 4RMFA 3AD7C 5FJ8K 1ZVUA 4IO9S 4A3JC 3S1RK 3GTPA 3ERED 3M3YK 3CAGA 4OINA 2NVXK 3HOZC 2JA5K 5C4XC 1O25A 3T02A 4LK0A 3OPFA 3S1QK 2A6EA 5TJ3A 4LR2A 3HOYK 1INNA 3GSIA 1Y1VK 2NVTC 5C44K 4PABA 4A3EK 4A3DC 1TWHC 4KC6A 4FZBA 5IP7C 3FKIK 4QJVB 4KAWX 5DM6S 1RU0A 4G0VA 1TWFC 4A3FC 3OEPA 1L0WA 3HOVK 5IORA 4KATA 1I3QA 2CW0A 1VRQC 2A69A 3S1RC 1DD5A 3M3YC 2WAQD 4GTBA 5CHPA 3GTOA 1B4AA 4YG2A 5EGHA 4WILA 2V6UA 4BBRK 3M4OK 3GTKA 4BXXC 4AYBD 2JA8K 3BP8C 2O5JA 2JA7K 3GDZA
chains in the Genus database with same CATH topology
2PPBA 3GTGC 3K7AC 2BE5A 3HOYC 3S1MC 4A3IC 4AYBL 3I4NK 1TWGK 4YFNA 4X6AC 1Y1VC 1ZYRA 1HQMA 5C44C 4A3KC 3H3VD 4A3MK 4Q4ZA 4A3EC 2R7ZK 5IYCC 3PO2K 2A6HA 4OIRA 2A68A 4OIOA 4MQ9A 3FKIC 5M5YK 4OIPA 1I6VA 3H3VL 4BY1K 4C3JK 3HOUK 3H0GK 2NVXC 4KN4A 4XLPA 3GTMC 3HOVC 4A3DK 3S1NK 1SFOK 3HKZL 4C3HC 3S16C 3RZOK 1I50K 5TMCA 4A3GK 2JA5C 3GTJK 2E2HK 3WODA 3GTPC 1SMYA 4A3LC 2E2IK 5IYDC 3S1QC 1I6HK 1BDFA 2NVQK 4BBRC 3HOWC 3S14K 4A3FK 4C3JC 4C2MC 2NVYC 2B63C 2O5IA 3S2DK 1WCMK 2Y0SL 3GTKK 2R93K 1R9TK 4QJVA 3GTQK 5C4XK 1K83K 3HOZK 2VUMC 4A3CK 4BY7K 5M5XK 4BBSK 2R92K 4Y7NK 4C3IK 5TMFA 1XPPA 1TWGC 4Y52K 4BXXK 3PO3K 4Q5SA 4YFKA 4LJZA 5C3EK 4KN7A 5IP9K 3GTLK 1TWAC 4KMUA 2E2JK 3S15K 2R7ZC 2NVTK 3PO2C 5M3MK 4A93C 3DXJA 1TWCC 4QIWD 3RZDC 1YNJA 1TWHK 2YU9K 3S1MK 3I4MC 2JA6K 5IP7K 4A3BC 5C4JC 3HOUC 3EQLA 3S1NC 4JK1A 4QIWL 2PMZD 3M4OC 3RZOC 1I50C 4YFXA 4MEXA 1TWFK 3S17K 5FJ8K 1I3QC 5M5WK 2JA8C 5FLMC 2E2IC 4A3JC 3S1RK 2JA7C 3M3YK 1I6HC 2WB1D 2NVQC 3GTOC 4OINA 2PMZL 2NVXK 3GTMK 3S14C 4LLGA 5IYBK 1WCMC 3I4NC 3GTKC 3S16K 4G7OA 5M3FK 3CQZK 1R9TC 3GTQC 3HOZC 5C4XC 3HOXK 2JA5K 2WB1L 3GTPK 4LK0A 4BY7C 1Y1WK 3S2HK 4A3MC 4Y7NC 3S1QK 2A6EA 4ZH4A 4C3IC 2PA8D 2B63K 4G7HA 4Y52C 3GTGK 2NVYK 5C3EC 3K7AK 3HOYK 4A3IK 2E2JC 3S15C 4BY1C 4X6AK 1Y1VK 2NVTC 2PA8L 5C44K 4XSXA 3H0GC 4A3KK 4A3EK 4A3DC 1TWHC 1SFOC 2YU9C 5IYCK 2JA6C 5IP7C 3FKIK 4A3GC 4QJVB 1TWAK 3GTJC 2E2HC 4G7ZA 1IW7A 3S17C 1TWFC 4A93K 3HKZD 4A3FC 1TWCK 3RZDK 3HOVK 4LK1A 3S2DC 4C3HK 2CW0A 2A69A 3S1RC 3I4MK 3M3YC 2WAQD 2R93C 4A3BK 5C4JK 1K83C 4A3CC 4MEYA 4A3LK 4BBSC 2R92C 4YG2A 5IYDK 5IYBC 4NOIA 3M4OK 4BBRK 1YNNA 3HOWK 3CQZC 4BXXC 3PO3C 4OIQA 4AYBD 2Y0SD 3HOXC 4XLNA 4GZYA 1I3QK 2WAQL 5IP9C 1Y1WC 4XSZA 3GTLC 3S2HC 5D4DA 2O5JA 4C2MK 5FLMK 4A3JK 2JA7K 3GTOK 2JA8K 2VUMK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PPB A;  3GTG C;  3K7A C;  2BE5 A;  3HOY C;  3S1M C;  4A3I C;  4AYB L;  3I4N K;  1TWG K;  4YFN A;  4X6A C;  1Y1V C;  1ZYR A;  1HQM A;  5C44 C;  4A3K C;  3H3V D;  4A3M K;  4Q4Z A;  4A3E C;  2R7Z K;  5IYC C;  3PO2 K;  2A6H A;  4OIR A;  2A68 A;  4OIO A;  4MQ9 A;  3FKI C;  5M5Y K;  4OIP A;  1I6V A;  3H3V L;  4BY1 K;  4C3J K;  3HOU K;  3H0G K;  2NVX C;  4KN4 A;  4XLP A;  3GTM C;  3HOV C;  4A3D K;  3S1N K;  1SFO K;  3HKZ L;  4C3H C;  3S16 C;  3RZO K;  1I50 K;  5TMC A;  4A3G K;  2JA5 C;  3GTJ K;  2E2H K;  3WOD A;  3GTP C;  1SMY A;  4A3L C;  2E2I K;  5IYD C;  3S1Q C;  1I6H K;  1BDF A;  2NVQ K;  4BBR C;  3HOW C;  3S14 K;  4A3F K;  4C3J C;  4C2M C;  2NVY C;  2B63 C;  2O5I A;  3S2D K;  1WCM K;  2Y0S L;  3GTK K;  2R93 K;  1R9T K;  4QJV A;  3GTQ K;  5C4X K;  1K83 K;  3HOZ K;  2VUM C;  4A3C K;  4BY7 K;  5M5X K;  4BBS K;  2R92 K;  4Y7N K;  4C3I K;  5TMF A;  1XPP A;  1TWG C;  4Y52 K;  4BXX K;  3PO3 K;  4Q5S A;  4YFK A;  4LJZ A;  5C3E K;  4KN7 A;  5IP9 K;  3GTL K;  1TWA C;  4KMU A;  2E2J K;  3S15 K;  2R7Z C;  2NVT K;  3PO2 C;  5M3M K;  4A93 C;  3DXJ A;  1TWC C;  4QIW D;  3RZD C;  1YNJ A;  1TWH K;  2YU9 K;  3S1M K;  3I4M C;  2JA6 K;  5IP7 K;  4A3B C;  5C4J C;  3HOU C;  3EQL A;  3S1N C;  4JK1 A;  4QIW L;  2PMZ D;  3M4O C;  3RZO C;  1I50 C;  4YFX A;  4MEX A;  1TWF K;  3S17 K;  5FJ8 K;  1I3Q C;  5M5W K;  2JA8 C;  5FLM C;  2E2I C;  4A3J C;  3S1R K;  2JA7 C;  3M3Y K;  1I6H C;  2WB1 D;  2NVQ C;  3GTO C;  4OIN A;  2PMZ L;  2NVX K;  3GTM K;  3S14 C;  4LLG A;  5IYB K;  1WCM C;  3I4N C;  3GTK C;  3S16 K;  4G7O A;  5M3F K;  3CQZ K;  1R9T C;  3GTQ C;  3HOZ C;  5C4X C;  3HOX K;  2JA5 K;  2WB1 L;  3GTP K;  4LK0 A;  4BY7 C;  1Y1W K;  3S2H K;  4A3M C;  4Y7N C;  3S1Q K;  2A6E A;  4ZH4 A;  4C3I C;  2PA8 D;  2B63 K;  4G7H A;  4Y52 C;  3GTG K;  2NVY K;  5C3E C;  3K7A K;  3HOY K;  4A3I K;  2E2J C;  3S15 C;  4BY1 C;  4X6A K;  1Y1V K;  2NVT C;  2PA8 L;  5C44 K;  4XSX A;  3H0G C;  4A3K K;  4A3E K;  4A3D C;  1TWH C;  1SFO C;  2YU9 C;  5IYC K;  2JA6 C;  5IP7 C;  3FKI K;  4A3G C;  4QJV B;  1TWA K;  3GTJ C;  2E2H C;  4G7Z A;  1IW7 A;  3S17 C;  1TWF C;  4A93 K;  3HKZ D;  4A3F C;  1TWC K;  3RZD K;  3HOV K;  4LK1 A;  3S2D C;  4C3H K;  2CW0 A;  2A69 A;  3S1R C;  3I4M K;  3M3Y C;  2WAQ D;  2R93 C;  4A3B K;  5C4J K;  1K83 C;  4A3C C;  4MEY A;  4A3L K;  4BBS C;  2R92 C;  4YG2 A;  5IYD K;  5IYB C;  4NOI A;  3M4O K;  4BBR K;  1YNN A;  3HOW K;  3CQZ C;  4BXX C;  3PO3 C;  4OIQ A;  4AYB D;  2Y0S D;  3HOX C;  4XLN A;  4GZY A;  1I3Q K;  2WAQ L;  5IP9 C;  1Y1W C;  4XSZ A;  3GTL C;  3S2H C;  5D4D A;  2O5J A;  4C2M K;  5FLM K;  4A3J K;  2JA7 K;  3GTO K;  2JA8 K;  2VUM K; 
#chains in the Genus database with same CATH topology
 3HOY C;  4YFN A;  1Y1V C;  5C44 C;  1WQH A;  3H3V D;  4A3M K;  4Q4Z A;  4A3E C;  3H0G A;  3HXA A;  5JVG S;  2YU9 A;  5HQH A;  4OIR A;  3FKI C;  4OIP A;  1EFW A;  3GTJ A;  4BY1 K;  4WJ3 M;  1XZQ A;  1AB4 A;  3GTM C;  1JOE A;  3HOV C;  3S16 C;  2E2H K;  3GTP C;  3IPJ A;  1BDF A;  3T00 A;  1EQR A;  4BBR C;  1VH2 A;  1XXC A;  3FOF A;  1WCM K;  2FQO A;  3GTK K;  3GTL A;  2ZJR S;  4GFQ A;  2XCO A;  4BY7 K;  5M5X K;  4Y7N K;  4C3I K;  3GTG A;  4IOC S;  3SZY A;  1XZQ B;  4WF9 S;  4YFK A;  5IP9 K;  1X31 C;  2E2J K;  4M1X A;  4P5B A;  1TWF A;  4KDD A;  4QIW D;  3S1M K;  1YNJ A;  2YU9 K;  3I4M C;  3FHZ A;  4A3B C;  5C4J C;  1O2A A;  3EQL A;  2NVX A;  4MEX A;  4LQY A;  4AH6 A;  1I3Q C;  1KQ4 A;  2Y3P A;  2JA5 A;  1EH1 A;  5FLM C;  1WOP A;  1VJE A;  3GTO C;  2PMZ L;  5IYB K;  1WCM C;  2B63 A;  3GTK C;  3S0X A;  4G7O A;  5M3F K;  5HL8 A;  2KPU A;  4BY7 C;  1Y1V A;  1FEU A;  3ADA C;  4Y7N C;  1WOS A;  4C3I C;  2ZFZ A;  3PIO S;  2L3U A;  4G7H A;  3GTG K;  1ZXO A;  1F7U A;  3FKI A;  1USO A;  2E2J C;  2V6S A;  1F7V A;  4X6A K;  2PA8 L;  3H0G C;  2YU9 C;  2ZUE A;  5IYC K;  1WQF A;  4A3G C;  1J98 A;  4WFA S;  1TWA K;  3GTJ C;  1O26 A;  1EK8 A;  1UV7 A;  4G7Z A;  4A93 K;  1I50 A;  3RZD K;  4LK1 A;  1J6V A;  3N3Y A;  2JA7 A;  1IBA A;  2RGR A;  1V5V A;  4MEY A;  5IYD K;  5IYB C;  3GEI A;  3PO3 C;  4GZY A;  4C3J K;  1R9T A;  4XLN A;  2B63 K;  3GTL C;  4XSZ A;  3GTG C;  3I4N K;  1DCH A;  4X6A C;  1ZYR A;  1XXB A;  3G4A A;  5IYC C;  3PIP S;  1O28 A;  3DLL S;  1XZP A;  2JA6 A;  1BJT A;  2GAH C;  2E2H A;  3GEH A;  2P5M A;  3HOU K;  2NVX C;  1WSR A;  4GTA A;  1SFO K;  1B4B A;  1I50 K;  1WCM A;  5HL7 S;  2JA5 C;  3WOD A;  5IYD C;  3S1Q C;  1I6H K;  2NVQ K;  4O2D A;  4C3J C;  3CQZ A;  4GTE A;  2B63 C;  3S2D K;  3ORE A;  1Y1W A;  2R93 K;  1R9T K;  1WSV A;  1K83 K;  4A3C K;  1XZP B;  5IOQ A;  2R92 K;  4BBS K;  5TMF A;  4Y52 K;  3BUE A;  5C3E K;  4KM8 A;  4IOA S;  4KMU A;  5DM7 S;  3S15 K;  3SZZ A;  1F93 A;  3LYW A;  3L4J A;  2KQ1 A;  2JA6 K;  3HOU C;  2PMZ D;  3M4O C;  3S17 K;  1I50 C;  2JA8 C;  2W7V A;  2JA7 C;  4KAR A;  1I6H C;  2NVQ C;  1EI6 A;  3N0B A;  3TFI A;  3A8I A;  2ZUF A;  3CQZ K;  1R9T C;  3LPX A;  3HOX K;  2KXY A;  2WB1 L;  1O2B A;  3FOE A;  4BLB A;  1Y1W K;  3AQP A;  3S2H K;  4A3M C;  4ZH4 A;  2PA8 D;  4Y52 C;  3CF5 S;  4GT9 A;  2NVY K;  5C3E C;  3S15 C;  1TWA A;  4BY1 C;  2GSU A;  2R7Z A;  4XSX A;  1J6W A;  4KMD A;  2ZJP S;  2JA6 C;  3VA7 A;  1DCO A;  1WOR A;  2E2H C;  3NUH A;  3GIR A;  3S17 C;  2FQT A;  3HKZ D;  1TWC K;  5JVO A;  4KMA A;  1G51 A;  4PAA A;  2E2I A;  4A3L K;  4WFN S;  1J6X A;  2EBB A;  1YNN A;  4BKW A;  3HOW K;  3CQZ C;  4OIQ A;  3HOX C;  1WOO A;  3GTQ A;  5IP9 C;  1Y1W C;  3S2H C;  4A3J K;  2XCQ A;  5D4D A;  3GEE A;  4KB4 A;  2PPB A;  2KWA A;  5JFE A;  1DCP A;  3S1M C;  1TWG K;  1ZBS A;  4KB2 A;  1F9N A;  2R7Z K;  1SFO A;  5M5Y K;  4MQ9 A;  1HI9 A;  1I6V A;  2L5N A;  4KN4 A;  4XLP A;  4A3D K;  3S1N K;  3N0C A;  3HKZ L;  2GSO A;  5IOS A;  3LAJ A;  5TMC A;  2R93 A;  4KAS A;  4G0W A;  3TTG A;  1K83 A;  1SMY A;  4A3L C;  2E2I K;  1O24 A;  2R92 A;  4U67 S;  3HOW C;  1VGX A;  3QX3 A;  3S14 K;  4A3F K;  1XXA A;  4KM9 A;  4QJV A;  3GTQ K;  1IQ0 A;  4DDQ A;  1TWG C;  4BXX K;  4Q5S A;  4KN7 A;  1TWA C;  4WFB S;  3TFJ A;  2R7Z C;  5E68 A;  4A93 C;  3RZD C;  3TFH A;  3S1N C;  4JK1 A;  1VLO A;  3JST A;  1C0A A;  2ZJQ S;  4YFX A;  3AQO A;  5M5W K;  5CJ9 A;  4KMH A;  2E2I C;  2WB1 D;  1IL2 A;  3GTM K;  3S14 C;  1JVI A;  4LLG A;  3S16 K;  3I4N C;  2GSN A;  2NVY A;  1O27 A;  3T01 A;  1JQW A;  4GTF A;  3GTQ C;  3A8K A;  3GTP K;  4LOW A;  2VUM A;  1ZQ1 C;  2GAG C;  4XCH A;  1YCL A;  1WIH A;  2V6T A;  5JVH S;  4GTC A;  3K7A K;  2CFA A;  4A3I K;  1PJ6 A;  4C45 A;  4P5A A;  2P8T A;  1USM A;  1PJ5 A;  3AD9 C;  3G4C A;  4A3K K;  1O2F B;  1SFO C;  1O29 A;  1YX2 A;  1TWC A;  1ISE A;  2PHC B;  3AD8 C;  1IE0 A;  3BP3 A;  1IW7 A;  5IOT A;  3S2D C;  1PJ7 A;  4C3H K;  3I4M K;  2R93 C;  4A3B K;  5C4J K;  1K83 C;  4A3C C;  1BS2 A;  1WQG A;  4WJ4 A;  3AH5 A;  4BBS C;  2R92 C;  2CFA B;  4NOI A;  2RH6 A;  5EGE A;  3V4G A;  2XCR B;  1TWG A;  1BGW A;  1I3Q K;  2Y0S D;  2WAQ L;  4C2M K;  5FLM K;  1IS1 A;  1GE9 A;  3GTO K;  2VUM K;  4ILD A;  3MML B;  3K7A C;  2BE5 A;  4AYB L;  4WCE S;  4A3I C;  1HQM A;  4BLA A;  4A3K C;  1TWH A;  5L46 A;  3PO2 K;  2A6H A;  2A68 A;  4OIO A;  3H3V L;  3H0G K;  2JH3 A;  4C3H C;  3RZO K;  4A3G K;  3GTJ K;  2O5I A;  4C2M C;  2NVY C;  2Y0S L;  3HOZ K;  4FM9 A;  5C4X K;  2VUM C;  1XPP A;  3PO3 K;  4LJZ A;  3GTL K;  4GTL A;  2D6F C;  4J3N A;  4P9S A;  2NVT K;  3PO2 C;  5M3M K;  3DXJ A;  3L4K A;  1TWC C;  1TWH K;  3Q3Q A;  4G0U A;  3A8J A;  5IP7 K;  3LAP A;  3GTM A;  4GTD A;  4QIW L;  3RZO C;  1TWF K;  4RMF A;  3AD7 C;  5FJ8 K;  1ZVU A;  4IO9 S;  4A3J C;  3S1R K;  3GTP A;  3ERE D;  3M3Y K;  3CAG A;  4OIN A;  2NVX K;  3HOZ C;  2JA5 K;  5C4X C;  1O25 A;  3T02 A;  4LK0 A;  3OPF A;  3S1Q K;  2A6E A;  5TJ3 A;  4LR2 A;  3HOY K;  1INN A;  3GSI A;  1Y1V K;  2NVT C;  5C44 K;  4PAB A;  4A3E K;  4A3D C;  1TWH C;  4KC6 A;  4FZB A;  5IP7 C;  3FKI K;  4QJV B;  4KAW X;  5DM6 S;  1RU0 A;  4G0V A;  1TWF C;  4A3F C;  3OEP A;  1L0W A;  3HOV K;  5IOR A;  4KAT A;  1I3Q A;  2CW0 A;  1VRQ C;  2A69 A;  3S1R C;  1DD5 A;  3M3Y C;  2WAQ D;  4GTB A;  5CHP A;  3GTO A;  1B4A A;  4YG2 A;  5EGH A;  4WIL A;  2V6U A;  4BBR K;  3M4O K;  3GTK A;  4BXX C;  4AYB D;  2JA8 K;  3BP8 C;  2O5J A;  2JA7 K;  3GDZ A; 
#chains in the Genus database with same CATH homology
 2PPB A;  3GTG C;  3K7A C;  2BE5 A;  3HOY C;  3S1M C;  4A3I C;  4AYB L;  3I4N K;  1TWG K;  4YFN A;  4X6A C;  1Y1V C;  1ZYR A;  1HQM A;  5C44 C;  4A3K C;  3H3V D;  4A3M K;  4Q4Z A;  4A3E C;  2R7Z K;  5IYC C;  3PO2 K;  2A6H A;  4OIR A;  2A68 A;  4OIO A;  4MQ9 A;  3FKI C;  5M5Y K;  4OIP A;  1I6V A;  3H3V L;  4BY1 K;  4C3J K;  3HOU K;  3H0G K;  2NVX C;  4KN4 A;  4XLP A;  3GTM C;  3HOV C;  4A3D K;  3S1N K;  1SFO K;  3HKZ L;  4C3H C;  3S16 C;  3RZO K;  1I50 K;  5TMC A;  4A3G K;  2JA5 C;  3GTJ K;  2E2H K;  3WOD A;  3GTP C;  1SMY A;  4A3L C;  2E2I K;  5IYD C;  3S1Q C;  1I6H K;  1BDF A;  2NVQ K;  4BBR C;  3HOW C;  3S14 K;  4A3F K;  4C3J C;  4C2M C;  2NVY C;  2B63 C;  2O5I A;  3S2D K;  1WCM K;  2Y0S L;  3GTK K;  2R93 K;  1R9T K;  4QJV A;  3GTQ K;  5C4X K;  1K83 K;  3HOZ K;  2VUM C;  4A3C K;  4BY7 K;  5M5X K;  4BBS K;  2R92 K;  4Y7N K;  4C3I K;  5TMF A;  1XPP A;  1TWG C;  4Y52 K;  4BXX K;  3PO3 K;  4Q5S A;  4YFK A;  4LJZ A;  5C3E K;  4KN7 A;  5IP9 K;  3GTL K;  1TWA C;  4KMU A;  2E2J K;  3S15 K;  2R7Z C;  2NVT K;  3PO2 C;  5M3M K;  4A93 C;  3DXJ A;  1TWC C;  4QIW D;  3RZD C;  1YNJ A;  1TWH K;  2YU9 K;  3S1M K;  3I4M C;  2JA6 K;  5IP7 K;  4A3B C;  5C4J C;  3HOU C;  3EQL A;  3S1N C;  4JK1 A;  4QIW L;  2PMZ D;  3M4O C;  3RZO C;  1I50 C;  4YFX A;  4MEX A;  1TWF K;  3S17 K;  5FJ8 K;  1I3Q C;  5M5W K;  2JA8 C;  5FLM C;  2E2I C;  4A3J C;  3S1R K;  2JA7 C;  3M3Y K;  1I6H C;  2WB1 D;  2NVQ C;  3GTO C;  4OIN A;  2PMZ L;  2NVX K;  3GTM K;  3S14 C;  4LLG A;  5IYB K;  1WCM C;  3I4N C;  3GTK C;  3S16 K;  4G7O A;  5M3F K;  3CQZ K;  1R9T C;  3GTQ C;  3HOZ C;  5C4X C;  3HOX K;  2JA5 K;  2WB1 L;  3GTP K;  4LK0 A;  4BY7 C;  1Y1W K;  3S2H K;  4A3M C;  4Y7N C;  3S1Q K;  2A6E A;  4ZH4 A;  4C3I C;  2PA8 D;  2B63 K;  4G7H A;  4Y52 C;  3GTG K;  2NVY K;  5C3E C;  3K7A K;  3HOY K;  4A3I K;  2E2J C;  3S15 C;  4BY1 C;  4X6A K;  1Y1V K;  2NVT C;  2PA8 L;  5C44 K;  4XSX A;  3H0G C;  4A3K K;  4A3E K;  4A3D C;  1TWH C;  1SFO C;  2YU9 C;  5IYC K;  2JA6 C;  5IP7 C;  3FKI K;  4A3G C;  4QJV B;  1TWA K;  3GTJ C;  2E2H C;  4G7Z A;  1IW7 A;  3S17 C;  1TWF C;  4A93 K;  3HKZ D;  4A3F C;  1TWC K;  3RZD K;  3HOV K;  4LK1 A;  3S2D C;  4C3H K;  2CW0 A;  2A69 A;  3S1R C;  3I4M K;  3M3Y C;  2WAQ D;  2R93 C;  4A3B K;  5C4J K;  1K83 C;  4A3C C;  4MEY A;  4A3L K;  4BBS C;  2R92 C;  4YG2 A;  5IYD K;  5IYB C;  4NOI A;  3M4O K;  4BBR K;  1YNN A;  3HOW K;  3CQZ C;  4BXX C;  3PO3 C;  4OIQ A;  4AYB D;  2Y0S D;  3HOX C;  4XLN A;  4GZY A;  1I3Q K;  2WAQ L;  5IP9 C;  1Y1W C;  4XSZ A;  3GTL C;  3S2H C;  5D4D A;  2O5J A;  4C2M K;  5FLM K;  4A3J K;  2JA7 K;  3GTO K;  2JA8 K;  2VUM K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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