3GTMC

Co-complex of backtracked rna polymerase ii with tfiis
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution.
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transcription, transferase/dna-rna hybrid
molecule keywords DNA-directed RNA polymerase II subunit RPB1
total genus 42
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2009-03-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 3gtmC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 3gtmC01
1SMYA 1I6VA 1TWHK 3HOUK 4OIQA 3M3YC 2PMZL 3EQLA 5IP9K 3GTQK 1R9TC 1I6HK 4YG2A 2O5IA 3M3YK 3GTPK 3S15C 1BDFA 4BBRC 4A3KC 4BBSC 4KN4A 4QIWD 2E2IC 3CQZK 2VUMK 3HOVC 4A93C 1TWGC 2R92C 4BY1K 5C4JC 2R7ZC 3HOZK 4A3FK 1Y1VC 3PO3C 3S2HC 3S1NC 4Y7NK 5C3EK 2R93C 2A68A 4A3MC 3WODA 2Y0SD 2B63C 3GTKC 4C2MC 3H3VL 4A3BC 4AYBL 4Y52K 4OIRA 2PMZD 4YFKA 3S1RC 4YFXA 4X6AK 4JK1A 1TWFC 2WAQL 3S1MK 3HKZD 3S2HK 3S16C 3HOZC 4X6AC 2R7ZK 1I3QK 5C4XK 5IYDC 1TWCC 2NVYC 2B63K 3I4NK 4BY7K 1I3QC 4MEYA 3S17K 4A3KK 3RZOC 3S15K 2JA8K 1K83C 4NOIA 2NVTC 3S1MC 1TWFK 3K7AK 5M5XK 4QJVB 3H0GC 4C3IC 3M4OK 3HOUC 3HOVK 1TWAC 3CQZC 3H3VD 2NVXC 3GTMC 2E2IK 3HOWK 4YFNA 2E2HC 4BBRK 5C3EC 4MQ9A 4BBSK 5IP7K 4A3CK 1WCMK 1ZYRA 4A3IC 3HKZL 4A3JC 3RZDC 3GTLK 4MEXA 3K7AC 1WCMC 1K83K 5IP7C 1TWGK 2NVTK 1YNJA 4OIOA 4XSZA 2NVQC 3S2DK 5TMFA 3HOWC 3S14K 2Y0SL 2NVXK 3GTMK 2JA6C 3GTOC 1TWAK 4G7HA 4AYBD 4KN7A 4XLPA 2A69A 3GTGC 3I4MC 4C3JK 1Y1WK 2JA5K 2YU9K 4BXXK 3S16K 3RZDK 1R9TK 3GTQC 4XLNA 3I4MK 4OIPA 2JA5C 4GZYA 4LK0A 4A3CC 3FKIC 5C44C 2E2JK 3S1RK 4A3EK 4BY7C 3PO2C 5M5YK 4LLGA 5FLMC 3HOXC 4C3IK 4KMUA 4C3HC 4Y7NC 4A3LC 4A3GK 4ZH4A 1Y1VK 5IYBC 4G7ZA 3RZOK 3S1NK 3PO3K 3S17C 2E2HK 5IYCC 2JA7C 1I50K 3GTJK 4A3BK 2PA8D 4A93K 3GTKK 3GTJC 4LK1A 4A3EC 4OINA 3M4OC 3H0GK 5IYCK 1HQMA 2JA7K 4A3DC 5FJ8K 2WB1L 3S1QC 2JA8C 4A3DK 1I6HC 4C3HK 5IP9C 4BY1C 2R92K 3I4NC 1TWCK 2NVYK 4G7OA 4C2MK 5IYDK 2JA6K 2CW0A 5C4XC 1XPPA 3GTOK 1I50C 4LJZA 5M3MK 4Q5SA 2E2JC 3FKIK 2NVQK 4QJVA 5TMCA 3S1QK 2O5JA 4A3FC 4A3JK 2YU9C 5C4JK 2PPBA 4BXXC 4Y52C 1Y1WC 5FLMK 5M3FK 2BE5A 1SFOK 3S2DC 4C3JC 3GTGK 3PO2K 4QIWL 3HOYK 4A3MK 2A6HA 3DXJA 2R93K 5C44K 1IW7A 1SFOC 2WB1D 5D4DA 5M5WK 3GTPC 4A3GC 2WAQD 5IYBK 4A3LK 4Q4ZA 3GTLC 4XSXA 4A3IK 3HOXK 1TWHC 2VUMC 3S14C 3HOYC 2A6EA 2PA8L 1YNNA
chains in the Genus database with same CATH superfamily
1SMYA 2RGRA 1Y1WA 3M3YC 3G4AA 1XZPB 4ILDA 1JQWA 1R9TA 3PIOS 3OEPA 3S15C 3OPFA 1BDFA 4BBRC 1PJ5A 4IOCS 3L4KA 5TJ3A 2V6TA 3PIPS 1JOEA 2FQTA 1O27A 4IO9S 2L3UA 1Y1VA 1ZVUA 2E2HA 1I50A 3GTJA 3GTKC 1WORA 4AYBL 2JA7A 3HOZC 1I3QK 2R92A 2NVYA 4BLBA 4RMFA 2JA6A 1TWCC 4MEYA 1VLOA 3RZOC 3FKIA 4NOIA 1TWFK 4QJVB 3H0GC 2ZUFA 1EFWA 3BP3A 1ZBSA 3H3VD 3T02A 3N3YA 4A3IC 5DM7S 1IS1A 1WCMC 2NVTK 1YNJA 3BP8C 3S14K 2NVXK 3GTMK 3GTOC 4AYBD 4XLPA 1Y1WK 2A69A 1XXBA 4KATA 5L46A 1R9TK 3I4MK 4A3CC 2JA5C 2PHCB 4KDDA 5E68A 3FKIC 2JH3A 4GFQA 1J98A 5M5YK 4LLGA 3HOXC 4C3HC 3FHZA 1Y1VK 3PO3K 1C0AA 3AQPA 3FOEA 2E2HK 4GTBA 1I50K 1XXCA 3T00A 3TFIA 4A3BK 4A93K 4LK1A 4OINA 3H0GK 2JA7K 4A3DC 5IOQA 5FJ8K 3S1QC 1WOPA 2JA8C 4KC6A 1I6HC 1I3QA 2R92K 2NVYK 1O24A 1VH2A 4C2MK 4WFBS 3N0CA 2JA6K 2CW0A 1XPPA 2NVQK 3FKIK 1TWFA 4A3FC 4A3JK 2YU9C 4IOAS 1X31C 4Y52C 1Y1WC 4C3JC 3DXJA 5C44K 1SFOC 4J3NA 1F7VA 1ZXOA 1YX2A 1WCMA 2KQ1A 3V4GA 1O2AA 1TWHC 2FQOA 3S14C 2EBBA 2P8TA 3S2DC 1YNNA 4C3JK 2D6FC 4OIQA 3GTQK 1R9TC 2O5IA 4GTAA 1DCOA 2ZFZA 4C45A 4QIWD 4GTFA 3N0BA 3HOVC 1O2BA 1EH1A 4WCES 4BY1K 3HOZK 3S1NC 1USOA 4Y7NK 2ZJRS 4A3MC 2GSNA 1HI9A 3H3VL 3H0GA 2KWAA 4KB2A 4GTEA 4X6AC 1TWCA 5C4XK 4P5AA 3IPJA 3GTOA 5JFEA 2NVTC 5M5XK 3S1MC 3TFJA 5HL7S 5JVHS 4KM9A 3GTGA 1UV7A 2E2HC 4FM9A 4BBRK 4MQ9A 4A3CK 1WCMK 1JVIA 2XCRB 3RZDC 5IP7C 1F7UA 1IE0A 4OIOA 2KXYA 3HOWC 2Y0SL 4G7HA 3GTGC 3AD8C 3I4MC 3GTQA 3S16K 1FEUA 4BY7C 3PO2C 2W7VA 3GEIA 3JSTA 1XZQA 4A3LC 4A3GK 5IYBC 4G7ZA 1AB4A 2GSUA 3GEEA 2PA8D 2GAGC 4GTCA 5IYCK 1BGWA 5JVOA 1ISEA 2R7ZA 5IP9C 1TWCK 4G7OA 1ZQ1C 3GTOK 2ZUEA 2B63A 1VGXA 2GSOA 3S0XA 4QJVA 1USMA 3T01A 5TMCA 3S1QK 2O5JA 5JVGS 5C4JK 2PPBA 4AH6A 3GTGK 4LQYA 1WOSA 4GTDA 5IYBK 2WB1D 4LOWA 3GTLA 3HOXK 1WQHA 3HOYC 2PA8L 1PJ7A 1I6VA 3HOUK 2GAHC 2PMZL 5IP9K 3EQLA 2YU9A 3DLLS 2CFAB 4A3KC 4BBSC 2E2IC 3CQZK 1TWGC 3TTGA 5C4JC 2CFAA 3ADAC 4A3FK 1Y1VC 3PO3C 3S2HC 4P9SA 4GT9A 1XZQB 3WODA 2B63C 1O29A 4OIRA 3CAGA 3S1RC 4YFXA 3A8IA 1TWFC 2WAQL 1IL2A 3HKZD 3Q3QA 2R7ZK 3AQOA 3BUEA 5IYDC 3I4NK 3SZYA 2B63K 1I3QC 1DCPA 4A3KK 2JA8K 3K7AK 2NVXA 3GIRA 4C3IC 1J6VA 1WIHA 3M4OK 3HOUC 1TWAC 1VJEA 5HQHA 2XCOA 5IOTA 2R93A 4LR2A 4KAWX 1ZYRA 4WF9S 4A3JC 3GTLK 1DCHA 3K7AC 1K83K 2V6SA 1TWGK 1WSVA 4XSZA 4O2DA 3S2DK 1WSRA 4G0VA 1TWAK 1BS2A 4KN7A 4KMDA 2JA5K 4BXXK 2YU9K 3GSIA 4XLNA 4OIPA 3GTPA 4GZYA 4LK0A 1XXAA 3S1RK 4G0WA 2ZJQS 1J6WA 3CQZA 2VUMA 3LPXA 5FLMC 4C3IK 4KMUA 3GDZA 4Y7NC 4ZH4A 3RZOK 1IBAA 4KMAA 1B4AA 2JA7C 3A8JA 1F9NA 3GTJC 4A3EC 1HQMA 1O25A 1VRQC 1O26A 2WB1L 4BLAA 5IYDK 4KARA 4WILA 1EK8A 4DDQA 1EI6A 3GEHA 5FLMK 1SFOK 2BE5A 4G0UA 2KPUA 4A3MK 2P5MA 4KB4A 2R93K 3CF5S 5M5WK 5D4DA 4Q4ZA 3GTLC 1KQ4A 4A3IK 1YCLA 1K83A 1TWGA 2VUMC 5CJ9A 4Q5SA 1TWAA 1J6XA 1TWHK 2JA5A 3QX3A 1I6HK 4YG2A 1V5VA 3M3YK 3L4JA 3GTPK 3AH5A 3TFHA 4KN4A 1F93A 2VUMK 1RU0A 4A93C 3OREA 2R92C 3SZZA 4WFAS 4PAAA 3LAJA 2R7ZC 1O2FB 3ERED 5C3EK 2R93C 2A68A 2Y0SD 3GTKA 4C2MC 4A3BC 4Y52K 2PMZD 4YFKA 4X6AK 4WJ3M 3LYWA 4JK1A 1PJ6A 3S1MK 3S2HK 3S16C 3MMLB 2NVYC 2L5NA 1WQFA 4BY7K 3S17K 4WJ4A 3S15K 1K83C 1GE9A 1INNA 5HL8A 4KM8A 3HXAA 1SFOA 3HOVK 3CQZC 2E2IK 2NVXC 3GTMC 2RH6A 3HOWK 4YFNA 4P5BA 4BBSK 5C3EC 3A8KA 5IP7K 1B4BA 3HKZL 4FZBA 1G51A 4MEXA 3VA7A 4U67S 2NVQC 1O28A 4M1XA 5TMFA 2JA6C 3FOFA 1TWHA 5CHPA 3RZDK 3GTQC 2E2JK 5C44C 4A3EK 2ZJPS 4XCHA 3LAPA 1DD5A 1XZPA 2XCQA 4WFNS 3S1NK 3S17C 5IYCC 5EGHA 3GTJK 4GTLA 1WOOA 3GTKK 3M4OC 4KMHA 1L0WA 5IORA 5DM6S 3AD7C 1WQGA 1BJTA 4A3DK 4C3HK 4BY1C 3I4NC 3AD9C 2Y3PA 5C4XC 1I50C 4LJZA 5M3MK 2E2JC 4PABA 3NUHA 4BXXC 5M3FK 1IQ0A 3G4CA 3PO2K 5IOSA 2E2IA 4QIWL 3HOYK 5EGEA 2A6HA 1IW7A 2V6UA 3GTPC 4A3GC 2WAQD 4A3LK 1EQRA 4XSXA 4KASA 4BKWA 3GTMA 2A6EA
chains in the Genus database with same CATH topology
1SMYA 1I6VA 1TWHK 3HOUK 4OIQA 3M3YC 2PMZL 3EQLA 5IP9K 3GTQK 1R9TC 1I6HK 4YG2A 2O5IA 3M3YK 3GTPK 3S15C 1BDFA 4BBRC 4A3KC 4BBSC 4KN4A 4QIWD 2E2IC 3CQZK 2VUMK 3HOVC 4A93C 1TWGC 2R92C 4BY1K 5C4JC 2R7ZC 3HOZK 4A3FK 1Y1VC 3PO3C 3S2HC 3S1NC 4Y7NK 5C3EK 2R93C 2A68A 4A3MC 3WODA 2Y0SD 2B63C 3GTKC 4C2MC 3H3VL 4A3BC 4AYBL 4Y52K 4OIRA 2PMZD 4YFKA 3S1RC 4YFXA 4X6AK 4JK1A 1TWFC 2WAQL 3S1MK 3HKZD 3S2HK 3S16C 3HOZC 4X6AC 2R7ZK 1I3QK 5C4XK 5IYDC 1TWCC 2NVYC 2B63K 3I4NK 4BY7K 1I3QC 4MEYA 3S17K 4A3KK 3RZOC 3S15K 2JA8K 1K83C 4NOIA 2NVTC 3S1MC 1TWFK 3K7AK 5M5XK 4QJVB 3H0GC 4C3IC 3M4OK 3HOUC 3HOVK 1TWAC 3CQZC 3H3VD 2NVXC 3GTMC 2E2IK 3HOWK 4YFNA 2E2HC 4BBRK 5C3EC 4MQ9A 4BBSK 5IP7K 4A3CK 1WCMK 1ZYRA 4A3IC 3HKZL 4A3JC 3RZDC 3GTLK 4MEXA 3K7AC 1WCMC 1K83K 5IP7C 1TWGK 2NVTK 1YNJA 4OIOA 4XSZA 2NVQC 3S2DK 5TMFA 3HOWC 3S14K 2Y0SL 2NVXK 3GTMK 2JA6C 3GTOC 1TWAK 4G7HA 4AYBD 4KN7A 4XLPA 2A69A 3GTGC 3I4MC 4C3JK 1Y1WK 2JA5K 2YU9K 4BXXK 3S16K 3RZDK 1R9TK 3GTQC 4XLNA 3I4MK 4OIPA 2JA5C 4GZYA 4LK0A 4A3CC 3FKIC 5C44C 2E2JK 3S1RK 4A3EK 4BY7C 3PO2C 5M5YK 4LLGA 5FLMC 3HOXC 4C3IK 4KMUA 4C3HC 4Y7NC 4A3LC 4A3GK 4ZH4A 1Y1VK 5IYBC 4G7ZA 3RZOK 3S1NK 3PO3K 3S17C 2E2HK 5IYCC 2JA7C 1I50K 3GTJK 4A3BK 2PA8D 4A93K 3GTKK 3GTJC 4LK1A 4A3EC 4OINA 3M4OC 3H0GK 5IYCK 1HQMA 2JA7K 4A3DC 5FJ8K 2WB1L 3S1QC 2JA8C 4A3DK 1I6HC 4C3HK 5IP9C 4BY1C 2R92K 3I4NC 1TWCK 2NVYK 4G7OA 4C2MK 5IYDK 2JA6K 2CW0A 5C4XC 1XPPA 3GTOK 1I50C 4LJZA 5M3MK 4Q5SA 2E2JC 3FKIK 2NVQK 4QJVA 5TMCA 3S1QK 2O5JA 4A3FC 4A3JK 2YU9C 5C4JK 2PPBA 4BXXC 4Y52C 1Y1WC 5FLMK 5M3FK 2BE5A 1SFOK 3S2DC 4C3JC 3GTGK 3PO2K 4QIWL 3HOYK 4A3MK 2A6HA 3DXJA 2R93K 5C44K 1IW7A 1SFOC 2WB1D 5D4DA 5M5WK 3GTPC 4A3GC 2WAQD 5IYBK 4A3LK 4Q4ZA 3GTLC 4XSXA 4A3IK 3HOXK 1TWHC 2VUMC 3S14C 3HOYC 2A6EA 2PA8L 1YNNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SMY A;  1I6V A;  1TWH K;  3HOU K;  4OIQ A;  3M3Y C;  2PMZ L;  3EQL A;  5IP9 K;  3GTQ K;  1R9T C;  1I6H K;  4YG2 A;  2O5I A;  3M3Y K;  3GTP K;  3S15 C;  1BDF A;  4BBR C;  4A3K C;  4BBS C;  4KN4 A;  4QIW D;  2E2I C;  3CQZ K;  2VUM K;  3HOV C;  4A93 C;  1TWG C;  2R92 C;  4BY1 K;  5C4J C;  2R7Z C;  3HOZ K;  4A3F K;  1Y1V C;  3PO3 C;  3S2H C;  3S1N C;  4Y7N K;  5C3E K;  2R93 C;  2A68 A;  4A3M C;  3WOD A;  2Y0S D;  2B63 C;  3GTK C;  4C2M C;  3H3V L;  4A3B C;  4AYB L;  4Y52 K;  4OIR A;  2PMZ D;  4YFK A;  3S1R C;  4YFX A;  4X6A K;  4JK1 A;  1TWF C;  2WAQ L;  3S1M K;  3HKZ D;  3S2H K;  3S16 C;  3HOZ C;  4X6A C;  2R7Z K;  1I3Q K;  5C4X K;  5IYD C;  1TWC C;  2NVY C;  2B63 K;  3I4N K;  4BY7 K;  1I3Q C;  4MEY A;  3S17 K;  4A3K K;  3RZO C;  3S15 K;  2JA8 K;  1K83 C;  4NOI A;  2NVT C;  3S1M C;  1TWF K;  3K7A K;  5M5X K;  4QJV B;  3H0G C;  4C3I C;  3M4O K;  3HOU C;  3HOV K;  1TWA C;  3CQZ C;  3H3V D;  2NVX C;  3GTM C;  2E2I K;  3HOW K;  4YFN A;  2E2H C;  4BBR K;  5C3E C;  4MQ9 A;  4BBS K;  5IP7 K;  4A3C K;  1WCM K;  1ZYR A;  4A3I C;  3HKZ L;  4A3J C;  3RZD C;  3GTL K;  4MEX A;  3K7A C;  1WCM C;  1K83 K;  5IP7 C;  1TWG K;  2NVT K;  1YNJ A;  4OIO A;  4XSZ A;  2NVQ C;  3S2D K;  5TMF A;  3HOW C;  3S14 K;  2Y0S L;  2NVX K;  3GTM K;  2JA6 C;  3GTO C;  1TWA K;  4G7H A;  4AYB D;  4KN7 A;  4XLP A;  2A69 A;  3GTG C;  3I4M C;  4C3J K;  1Y1W K;  2JA5 K;  2YU9 K;  4BXX K;  3S16 K;  3RZD K;  1R9T K;  3GTQ C;  4XLN A;  3I4M K;  4OIP A;  2JA5 C;  4GZY A;  4LK0 A;  4A3C C;  3FKI C;  5C44 C;  2E2J K;  3S1R K;  4A3E K;  4BY7 C;  3PO2 C;  5M5Y K;  4LLG A;  5FLM C;  3HOX C;  4C3I K;  4KMU A;  4C3H C;  4Y7N C;  4A3L C;  4A3G K;  4ZH4 A;  1Y1V K;  5IYB C;  4G7Z A;  3RZO K;  3S1N K;  3PO3 K;  3S17 C;  2E2H K;  5IYC C;  2JA7 C;  1I50 K;  3GTJ K;  4A3B K;  2PA8 D;  4A93 K;  3GTK K;  3GTJ C;  4LK1 A;  4A3E C;  4OIN A;  3M4O C;  3H0G K;  5IYC K;  1HQM A;  2JA7 K;  4A3D C;  5FJ8 K;  2WB1 L;  3S1Q C;  2JA8 C;  4A3D K;  1I6H C;  4C3H K;  5IP9 C;  4BY1 C;  2R92 K;  3I4N C;  1TWC K;  2NVY K;  4G7O A;  4C2M K;  5IYD K;  2JA6 K;  2CW0 A;  5C4X C;  1XPP A;  3GTO K;  1I50 C;  4LJZ A;  5M3M K;  4Q5S A;  2E2J C;  3FKI K;  2NVQ K;  4QJV A;  5TMC A;  3S1Q K;  2O5J A;  4A3F C;  4A3J K;  2YU9 C;  5C4J K;  2PPB A;  4BXX C;  4Y52 C;  1Y1W C;  5FLM K;  5M3F K;  2BE5 A;  1SFO K;  3S2D C;  4C3J C;  3GTG K;  3PO2 K;  4QIW L;  3HOY K;  4A3M K;  2A6H A;  3DXJ A;  2R93 K;  5C44 K;  1IW7 A;  1SFO C;  2WB1 D;  5D4D A;  5M5W K;  3GTP C;  4A3G C;  2WAQ D;  5IYB K;  4A3L K;  4Q4Z A;  3GTL C;  4XSX A;  4A3I K;  3HOX K;  1TWH C;  2VUM C;  3S14 C;  3HOY C;  2A6E A;  2PA8 L;  1YNN A; 
#chains in the Genus database with same CATH topology
 1SMY A;  2RGR A;  1Y1W A;  3M3Y C;  3G4A A;  1XZP B;  4ILD A;  1JQW A;  1R9T A;  3PIO S;  3OEP A;  3S15 C;  3OPF A;  1BDF A;  4BBR C;  1PJ5 A;  4IOC S;  3L4K A;  5TJ3 A;  2V6T A;  3PIP S;  1JOE A;  2FQT A;  1O27 A;  4IO9 S;  2L3U A;  1Y1V A;  1ZVU A;  2E2H A;  1I50 A;  3GTJ A;  3GTK C;  1WOR A;  4AYB L;  2JA7 A;  3HOZ C;  1I3Q K;  2R92 A;  2NVY A;  4BLB A;  4RMF A;  2JA6 A;  1TWC C;  4MEY A;  1VLO A;  3RZO C;  3FKI A;  4NOI A;  1TWF K;  4QJV B;  3H0G C;  2ZUF A;  1EFW A;  3BP3 A;  1ZBS A;  3H3V D;  3T02 A;  3N3Y A;  4A3I C;  5DM7 S;  1IS1 A;  1WCM C;  2NVT K;  1YNJ A;  3BP8 C;  3S14 K;  2NVX K;  3GTM K;  3GTO C;  4AYB D;  4XLP A;  1Y1W K;  2A69 A;  1XXB A;  4KAT A;  5L46 A;  1R9T K;  3I4M K;  4A3C C;  2JA5 C;  2PHC B;  4KDD A;  5E68 A;  3FKI C;  2JH3 A;  4GFQ A;  1J98 A;  5M5Y K;  4LLG A;  3HOX C;  4C3H C;  3FHZ A;  1Y1V K;  3PO3 K;  1C0A A;  3AQP A;  3FOE A;  2E2H K;  4GTB A;  1I50 K;  1XXC A;  3T00 A;  3TFI A;  4A3B K;  4A93 K;  4LK1 A;  4OIN A;  3H0G K;  2JA7 K;  4A3D C;  5IOQ A;  5FJ8 K;  3S1Q C;  1WOP A;  2JA8 C;  4KC6 A;  1I6H C;  1I3Q A;  2R92 K;  2NVY K;  1O24 A;  1VH2 A;  4C2M K;  4WFB S;  3N0C A;  2JA6 K;  2CW0 A;  1XPP A;  2NVQ K;  3FKI K;  1TWF A;  4A3F C;  4A3J K;  2YU9 C;  4IOA S;  1X31 C;  4Y52 C;  1Y1W C;  4C3J C;  3DXJ A;  5C44 K;  1SFO C;  4J3N A;  1F7V A;  1ZXO A;  1YX2 A;  1WCM A;  2KQ1 A;  3V4G A;  1O2A A;  1TWH C;  2FQO A;  3S14 C;  2EBB A;  2P8T A;  3S2D C;  1YNN A;  4C3J K;  2D6F C;  4OIQ A;  3GTQ K;  1R9T C;  2O5I A;  4GTA A;  1DCO A;  2ZFZ A;  4C45 A;  4QIW D;  4GTF A;  3N0B A;  3HOV C;  1O2B A;  1EH1 A;  4WCE S;  4BY1 K;  3HOZ K;  3S1N C;  1USO A;  4Y7N K;  2ZJR S;  4A3M C;  2GSN A;  1HI9 A;  3H3V L;  3H0G A;  2KWA A;  4KB2 A;  4GTE A;  4X6A C;  1TWC A;  5C4X K;  4P5A A;  3IPJ A;  3GTO A;  5JFE A;  2NVT C;  5M5X K;  3S1M C;  3TFJ A;  5HL7 S;  5JVH S;  4KM9 A;  3GTG A;  1UV7 A;  2E2H C;  4FM9 A;  4BBR K;  4MQ9 A;  4A3C K;  1WCM K;  1JVI A;  2XCR B;  3RZD C;  5IP7 C;  1F7U A;  1IE0 A;  4OIO A;  2KXY A;  3HOW C;  2Y0S L;  4G7H A;  3GTG C;  3AD8 C;  3I4M C;  3GTQ A;  3S16 K;  1FEU A;  4BY7 C;  3PO2 C;  2W7V A;  3GEI A;  3JST A;  1XZQ A;  4A3L C;  4A3G K;  5IYB C;  4G7Z A;  1AB4 A;  2GSU A;  3GEE A;  2PA8 D;  2GAG C;  4GTC A;  5IYC K;  1BGW A;  5JVO A;  1ISE A;  2R7Z A;  5IP9 C;  1TWC K;  4G7O A;  1ZQ1 C;  3GTO K;  2ZUE A;  2B63 A;  1VGX A;  2GSO A;  3S0X A;  4QJV A;  1USM A;  3T01 A;  5TMC A;  3S1Q K;  2O5J A;  5JVG S;  5C4J K;  2PPB A;  4AH6 A;  3GTG K;  4LQY A;  1WOS A;  4GTD A;  5IYB K;  2WB1 D;  4LOW A;  3GTL A;  3HOX K;  1WQH A;  3HOY C;  2PA8 L;  1PJ7 A;  1I6V A;  3HOU K;  2GAH C;  2PMZ L;  5IP9 K;  3EQL A;  2YU9 A;  3DLL S;  2CFA B;  4A3K C;  4BBS C;  2E2I C;  3CQZ K;  1TWG C;  3TTG A;  5C4J C;  2CFA A;  3ADA C;  4A3F K;  1Y1V C;  3PO3 C;  3S2H C;  4P9S A;  4GT9 A;  1XZQ B;  3WOD A;  2B63 C;  1O29 A;  4OIR A;  3CAG A;  3S1R C;  4YFX A;  3A8I A;  1TWF C;  2WAQ L;  1IL2 A;  3HKZ D;  3Q3Q A;  2R7Z K;  3AQO A;  3BUE A;  5IYD C;  3I4N K;  3SZY A;  2B63 K;  1I3Q C;  1DCP A;  4A3K K;  2JA8 K;  3K7A K;  2NVX A;  3GIR A;  4C3I C;  1J6V A;  1WIH A;  3M4O K;  3HOU C;  1TWA C;  1VJE A;  5HQH A;  2XCO A;  5IOT A;  2R93 A;  4LR2 A;  4KAW X;  1ZYR A;  4WF9 S;  4A3J C;  3GTL K;  1DCH A;  3K7A C;  1K83 K;  2V6S A;  1TWG K;  1WSV A;  4XSZ A;  4O2D A;  3S2D K;  1WSR A;  4G0V A;  1TWA K;  1BS2 A;  4KN7 A;  4KMD A;  2JA5 K;  4BXX K;  2YU9 K;  3GSI A;  4XLN A;  4OIP A;  3GTP A;  4GZY A;  4LK0 A;  1XXA A;  3S1R K;  4G0W A;  2ZJQ S;  1J6W A;  3CQZ A;  2VUM A;  3LPX A;  5FLM C;  4C3I K;  4KMU A;  3GDZ A;  4Y7N C;  4ZH4 A;  3RZO K;  1IBA A;  4KMA A;  1B4A A;  2JA7 C;  3A8J A;  1F9N A;  3GTJ C;  4A3E C;  1HQM A;  1O25 A;  1VRQ C;  1O26 A;  2WB1 L;  4BLA A;  5IYD K;  4KAR A;  4WIL A;  1EK8 A;  4DDQ A;  1EI6 A;  3GEH A;  5FLM K;  1SFO K;  2BE5 A;  4G0U A;  2KPU A;  4A3M K;  2P5M A;  4KB4 A;  2R93 K;  3CF5 S;  5M5W K;  5D4D A;  4Q4Z A;  3GTL C;  1KQ4 A;  4A3I K;  1YCL A;  1K83 A;  1TWG A;  2VUM C;  5CJ9 A;  4Q5S A;  1TWA A;  1J6X A;  1TWH K;  2JA5 A;  3QX3 A;  1I6H K;  4YG2 A;  1V5V A;  3M3Y K;  3L4J A;  3GTP K;  3AH5 A;  3TFH A;  4KN4 A;  1F93 A;  2VUM K;  1RU0 A;  4A93 C;  3ORE A;  2R92 C;  3SZZ A;  4WFA S;  4PAA A;  3LAJ A;  2R7Z C;  1O2F B;  3ERE D;  5C3E K;  2R93 C;  2A68 A;  2Y0S D;  3GTK A;  4C2M C;  4A3B C;  4Y52 K;  2PMZ D;  4YFK A;  4X6A K;  4WJ3 M;  3LYW A;  4JK1 A;  1PJ6 A;  3S1M K;  3S2H K;  3S16 C;  3MML B;  2NVY C;  2L5N A;  1WQF A;  4BY7 K;  3S17 K;  4WJ4 A;  3S15 K;  1K83 C;  1GE9 A;  1INN A;  5HL8 A;  4KM8 A;  3HXA A;  1SFO A;  3HOV K;  3CQZ C;  2E2I K;  2NVX C;  3GTM C;  2RH6 A;  3HOW K;  4YFN A;  4P5B A;  4BBS K;  5C3E C;  3A8K A;  5IP7 K;  1B4B A;  3HKZ L;  4FZB A;  1G51 A;  4MEX A;  3VA7 A;  4U67 S;  2NVQ C;  1O28 A;  4M1X A;  5TMF A;  2JA6 C;  3FOF A;  1TWH A;  5CHP A;  3RZD K;  3GTQ C;  2E2J K;  5C44 C;  4A3E K;  2ZJP S;  4XCH A;  3LAP A;  1DD5 A;  1XZP A;  2XCQ A;  4WFN S;  3S1N K;  3S17 C;  5IYC C;  5EGH A;  3GTJ K;  4GTL A;  1WOO A;  3GTK K;  3M4O C;  4KMH A;  1L0W A;  5IOR A;  5DM6 S;  3AD7 C;  1WQG A;  1BJT A;  4A3D K;  4C3H K;  4BY1 C;  3I4N C;  3AD9 C;  2Y3P A;  5C4X C;  1I50 C;  4LJZ A;  5M3M K;  2E2J C;  4PAB A;  3NUH A;  4BXX C;  5M3F K;  1IQ0 A;  3G4C A;  3PO2 K;  5IOS A;  2E2I A;  4QIW L;  3HOY K;  5EGE A;  2A6H A;  1IW7 A;  2V6U A;  3GTP C;  4A3G C;  2WAQ D;  4A3L K;  1EQR A;  4XSX A;  4KAS A;  4BKW A;  3GTM A;  2A6E A; 
#chains in the Genus database with same CATH homology
 1SMY A;  1I6V A;  1TWH K;  3HOU K;  4OIQ A;  3M3Y C;  2PMZ L;  3EQL A;  5IP9 K;  3GTQ K;  1R9T C;  1I6H K;  4YG2 A;  2O5I A;  3M3Y K;  3GTP K;  3S15 C;  1BDF A;  4BBR C;  4A3K C;  4BBS C;  4KN4 A;  4QIW D;  2E2I C;  3CQZ K;  2VUM K;  3HOV C;  4A93 C;  1TWG C;  2R92 C;  4BY1 K;  5C4J C;  2R7Z C;  3HOZ K;  4A3F K;  1Y1V C;  3PO3 C;  3S2H C;  3S1N C;  4Y7N K;  5C3E K;  2R93 C;  2A68 A;  4A3M C;  3WOD A;  2Y0S D;  2B63 C;  3GTK C;  4C2M C;  3H3V L;  4A3B C;  4AYB L;  4Y52 K;  4OIR A;  2PMZ D;  4YFK A;  3S1R C;  4YFX A;  4X6A K;  4JK1 A;  1TWF C;  2WAQ L;  3S1M K;  3HKZ D;  3S2H K;  3S16 C;  3HOZ C;  4X6A C;  2R7Z K;  1I3Q K;  5C4X K;  5IYD C;  1TWC C;  2NVY C;  2B63 K;  3I4N K;  4BY7 K;  1I3Q C;  4MEY A;  3S17 K;  4A3K K;  3RZO C;  3S15 K;  2JA8 K;  1K83 C;  4NOI A;  2NVT C;  3S1M C;  1TWF K;  3K7A K;  5M5X K;  4QJV B;  3H0G C;  4C3I C;  3M4O K;  3HOU C;  3HOV K;  1TWA C;  3CQZ C;  3H3V D;  2NVX C;  3GTM C;  2E2I K;  3HOW K;  4YFN A;  2E2H C;  4BBR K;  5C3E C;  4MQ9 A;  4BBS K;  5IP7 K;  4A3C K;  1WCM K;  1ZYR A;  4A3I C;  3HKZ L;  4A3J C;  3RZD C;  3GTL K;  4MEX A;  3K7A C;  1WCM C;  1K83 K;  5IP7 C;  1TWG K;  2NVT K;  1YNJ A;  4OIO A;  4XSZ A;  2NVQ C;  3S2D K;  5TMF A;  3HOW C;  3S14 K;  2Y0S L;  2NVX K;  3GTM K;  2JA6 C;  3GTO C;  1TWA K;  4G7H A;  4AYB D;  4KN7 A;  4XLP A;  2A69 A;  3GTG C;  3I4M C;  4C3J K;  1Y1W K;  2JA5 K;  2YU9 K;  4BXX K;  3S16 K;  3RZD K;  1R9T K;  3GTQ C;  4XLN A;  3I4M K;  4OIP A;  2JA5 C;  4GZY A;  4LK0 A;  4A3C C;  3FKI C;  5C44 C;  2E2J K;  3S1R K;  4A3E K;  4BY7 C;  3PO2 C;  5M5Y K;  4LLG A;  5FLM C;  3HOX C;  4C3I K;  4KMU A;  4C3H C;  4Y7N C;  4A3L C;  4A3G K;  4ZH4 A;  1Y1V K;  5IYB C;  4G7Z A;  3RZO K;  3S1N K;  3PO3 K;  3S17 C;  2E2H K;  5IYC C;  2JA7 C;  1I50 K;  3GTJ K;  4A3B K;  2PA8 D;  4A93 K;  3GTK K;  3GTJ C;  4LK1 A;  4A3E C;  4OIN A;  3M4O C;  3H0G K;  5IYC K;  1HQM A;  2JA7 K;  4A3D C;  5FJ8 K;  2WB1 L;  3S1Q C;  2JA8 C;  4A3D K;  1I6H C;  4C3H K;  5IP9 C;  4BY1 C;  2R92 K;  3I4N C;  1TWC K;  2NVY K;  4G7O A;  4C2M K;  5IYD K;  2JA6 K;  2CW0 A;  5C4X C;  1XPP A;  3GTO K;  1I50 C;  4LJZ A;  5M3M K;  4Q5S A;  2E2J C;  3FKI K;  2NVQ K;  4QJV A;  5TMC A;  3S1Q K;  2O5J A;  4A3F C;  4A3J K;  2YU9 C;  5C4J K;  2PPB A;  4BXX C;  4Y52 C;  1Y1W C;  5FLM K;  5M3F K;  2BE5 A;  1SFO K;  3S2D C;  4C3J C;  3GTG K;  3PO2 K;  4QIW L;  3HOY K;  4A3M K;  2A6H A;  3DXJ A;  2R93 K;  5C44 K;  1IW7 A;  1SFO C;  2WB1 D;  5D4D A;  5M5W K;  3GTP C;  4A3G C;  2WAQ D;  5IYB K;  4A3L K;  4Q4Z A;  3GTL C;  4XSX A;  4A3I K;  3HOX K;  1TWH C;  2VUM C;  3S14 C;  3HOY C;  2A6E A;  2PA8 L;  1YNN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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