3GWIA

Crystal structure of mg-atpase nucleotide binding domain
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
164
structure length
164
Chain Sequence
b'MIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Magnesium-transporting ATPase, P-type 1
publication title The structure of Mg-ATPase nucleotide-binding domain at 1.6 A resolution reveals a unique ATP-binding motif
pubmed doi rcsb
source organism Escherichia coli
molecule tags Hydrolase
total genus 54
structure length 164
sequence length 164
ec nomenclature ec 7.2.2.14: P-type Mg(2+) transporter.
pdb deposition date 2009-04-01
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1110.10 Alpha Beta 3-Layer(aba) Sandwich Calcium-transporting ATPase, cytoplasmic domain N Calcium-transporting ATPase, cytoplasmic domain N 3gwiA00
5AVSA 1T5TA 2IYEA 3KDPA 2BY4A 1VFPA 5AVUA 2DQSA 3FPSA 5A3RA 3W5BA 2KMVA 3B9RA 5AVXA 2ZBEA 1MO7A 1XP5A 2C8LA 2YJ5A 4UU1A 5AW4A 5AW2A 2ZBFA 4BEVA 1U7QA 4YCNA 3W5AA 3BA6A 3AR9A 3AR2A 2KMXA 4HYTA 2YJ6A 3RFUA 2EAUA 3WGVA 3NANA 5AVTA 5AW3A 2ZBDA 3AR4A 3B8EA 4NABA 4RETA 2EATA 3A3YA 5A3QA 5AW1A 5AW9A 1T5SA 3GWIA 4Y3UA 1IWOA 3AR3A 4BYGA 5AW7A 3NALA 4J2TA 5AW8A 3A1EA 1MO8A 3TLMA 4RESA 2YJ3A 3N8GA 5AW5A 3J7TA 2AGVA 2O9JA 4UU0A 5A3SA 1Q3IA 4YCMA 2ZBGA 4KYTA 2OA0A 5AVYA 2C88A 5AVRA 3SKXA 5AW0A 2ZXEA 5AW6A 2EARA 3A1DA 2A00A 2C8KA 3N5KA 3WGUA 3AR7A 3W5CA 4YCLA 3AR8A 3FGOA 1SVJA 2C9MA 5AVZA 5AVVA 4XE5A 3NAMA 1WPGA 3AR5A 4UMVA 1SU4A 3A1CA 4XOUA 4BBJA 3FPBA 5AVWA 3W5DA 3SKYA 4H1WA 2B8EA 5AVQA 2YFYA 3B9BA 2ARFA 2YJ4A 4BEWA 3AR6A 2A29A
chains in the Genus database with same CATH superfamily
5AVSA 1T5TA 2IYEA 3KDPA 2BY4A 1VFPA 5AVUA 2DQSA 3FPSA 5A3RA 3W5BA 2KMVA 3B9RA 5AVXA 2ZBEA 1MO7A 1XP5A 2C8LA 2YJ5A 4UU1A 5AW4A 5AW2A 2ZBFA 4BEVA 1U7QA 4YCNA 3W5AA 3BA6A 3AR9A 3AR2A 2KMXA 4HYTA 2YJ6A 3RFUA 2EAUA 3WGVA 3NANA 5AVTA 5AW3A 2ZBDA 3AR4A 3B8EA 4NABA 4RETA 2EATA 3A3YA 5A3QA 5AW1A 5AW9A 1T5SA 3GWIA 4Y3UA 1IWOA 3AR3A 4BYGA 5AW7A 3NALA 4J2TA 5AW8A 3A1EA 1MO8A 3TLMA 4RESA 2YJ3A 3N8GA 5AW5A 3J7TA 2AGVA 2O9JA 4UU0A 5A3SA 1Q3IA 4YCMA 2ZBGA 4KYTA 2OA0A 5AVYA 2C88A 5AVRA 3SKXA 5AW0A 2ZXEA 5AW6A 2EARA 3A1DA 2A00A 2C8KA 3N5KA 3WGUA 3AR7A 3W5CA 4YCLA 3AR8A 3FGOA 1SVJA 2C9MA 5AVZA 5AVVA 4XE5A 3NAMA 1WPGA 3AR5A 4UMVA 1SU4A 3A1CA 4XOUA 4BBJA 3FPBA 5AVWA 3W5DA 3SKYA 4H1WA 2B8EA 5AVQA 2YFYA 3B9BA 2ARFA 2YJ4A 4BEWA 3AR6A 2A29A
chains in the Genus database with same CATH topology
5AVSA 1T5TA 2IYEA 3KDPA 2BY4A 1VFPA 5AVUA 2DQSA 3FPSA 5A3RA 3W5BA 2KMVA 3B9RA 5AVXA 2ZBEA 1MO7A 1XP5A 2C8LA 2YJ5A 4UU1A 5AW4A 5AW2A 2ZBFA 4BEVA 1U7QA 4YCNA 3W5AA 3BA6A 3AR9A 3AR2A 2KMXA 4HYTA 2YJ6A 3RFUA 2EAUA 3WGVA 3NANA 5AVTA 5AW3A 2ZBDA 3AR4A 3B8EA 4NABA 4RETA 2EATA 3A3YA 5A3QA 5AW1A 5AW9A 1T5SA 3GWIA 4Y3UA 1IWOA 3AR3A 4BYGA 5AW7A 3NALA 4J2TA 5AW8A 3A1EA 1MO8A 3TLMA 4RESA 2YJ3A 3N8GA 5AW5A 3J7TA 2AGVA 2O9JA 4UU0A 5A3SA 1Q3IA 4YCMA 2ZBGA 4KYTA 2OA0A 5AVYA 2C88A 5AVRA 3SKXA 5AW0A 2ZXEA 5AW6A 2EARA 3A1DA 2A00A 2C8KA 3N5KA 3WGUA 3AR7A 3W5CA 4YCLA 3AR8A 3FGOA 1SVJA 2C9MA 5AVZA 5AVVA 4XE5A 3NAMA 1WPGA 3AR5A 4UMVA 1SU4A 3A1CA 4XOUA 4BBJA 3FPBA 5AVWA 3W5DA 3SKYA 4H1WA 2B8EA 5AVQA 2YFYA 3B9BA 2ARFA 2YJ4A 4BEWA 3AR6A 2A29A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5AVS A;  1T5T A;  2IYE A;  3KDP A;  2BY4 A;  1VFP A;  5AVU A;  2DQS A;  3FPS A;  5A3R A;  3W5B A;  2KMV A;  3B9R A;  5AVX A;  2ZBE A;  1MO7 A;  1XP5 A;  2C8L A;  2YJ5 A;  4UU1 A;  5AW4 A;  5AW2 A;  2ZBF A;  4BEV A;  1U7Q A;  4YCN A;  3W5A A;  3BA6 A;  3AR9 A;  3AR2 A;  2KMX A;  4HYT A;  2YJ6 A;  3RFU A;  2EAU A;  3WGV A;  3NAN A;  5AVT A;  5AW3 A;  2ZBD A;  3AR4 A;  3B8E A;  4NAB A;  4RET A;  2EAT A;  3A3Y A;  5A3Q A;  5AW1 A;  5AW9 A;  1T5S A;  3GWI A;  4Y3U A;  1IWO A;  3AR3 A;  4BYG A;  5AW7 A;  3NAL A;  4J2T A;  5AW8 A;  3A1E A;  1MO8 A;  3TLM A;  4RES A;  2YJ3 A;  3N8G A;  5AW5 A;  3J7T A;  2AGV A;  2O9J A;  4UU0 A;  5A3S A;  1Q3I A;  4YCM A;  2ZBG A;  4KYT A;  2OA0 A;  5AVY A;  2C88 A;  5AVR A;  3SKX A;  5AW0 A;  2ZXE A;  5AW6 A;  2EAR A;  3A1D A;  2A00 A;  2C8K A;  3N5K A;  3WGU A;  3AR7 A;  3W5C A;  4YCL A;  3AR8 A;  3FGO A;  1SVJ A;  2C9M A;  5AVZ A;  5AVV A;  4XE5 A;  3NAM A;  1WPG A;  3AR5 A;  4UMV A;  1SU4 A;  3A1C A;  4XOU A;  4BBJ A;  3FPB A;  5AVW A;  3W5D A;  3SKY A;  4H1W A;  2B8E A;  5AVQ A;  2YFY A;  3B9B A;  2ARF A;  2YJ4 A;  4BEW A;  3AR6 A;  2A29 A; 
#chains in the Genus database with same CATH topology
 5AVS A;  1T5T A;  2IYE A;  3KDP A;  2BY4 A;  1VFP A;  5AVU A;  2DQS A;  3FPS A;  5A3R A;  3W5B A;  2KMV A;  3B9R A;  5AVX A;  2ZBE A;  1MO7 A;  1XP5 A;  2C8L A;  2YJ5 A;  4UU1 A;  5AW4 A;  5AW2 A;  2ZBF A;  4BEV A;  1U7Q A;  4YCN A;  3W5A A;  3BA6 A;  3AR9 A;  3AR2 A;  2KMX A;  4HYT A;  2YJ6 A;  3RFU A;  2EAU A;  3WGV A;  3NAN A;  5AVT A;  5AW3 A;  2ZBD A;  3AR4 A;  3B8E A;  4NAB A;  4RET A;  2EAT A;  3A3Y A;  5A3Q A;  5AW1 A;  5AW9 A;  1T5S A;  3GWI A;  4Y3U A;  1IWO A;  3AR3 A;  4BYG A;  5AW7 A;  3NAL A;  4J2T A;  5AW8 A;  3A1E A;  1MO8 A;  3TLM A;  4RES A;  2YJ3 A;  3N8G A;  5AW5 A;  3J7T A;  2AGV A;  2O9J A;  4UU0 A;  5A3S A;  1Q3I A;  4YCM A;  2ZBG A;  4KYT A;  2OA0 A;  5AVY A;  2C88 A;  5AVR A;  3SKX A;  5AW0 A;  2ZXE A;  5AW6 A;  2EAR A;  3A1D A;  2A00 A;  2C8K A;  3N5K A;  3WGU A;  3AR7 A;  3W5C A;  4YCL A;  3AR8 A;  3FGO A;  1SVJ A;  2C9M A;  5AVZ A;  5AVV A;  4XE5 A;  3NAM A;  1WPG A;  3AR5 A;  4UMV A;  1SU4 A;  3A1C A;  4XOU A;  4BBJ A;  3FPB A;  5AVW A;  3W5D A;  3SKY A;  4H1W A;  2B8E A;  5AVQ A;  2YFY A;  3B9B A;  2ARF A;  2YJ4 A;  4BEW A;  3AR6 A;  2A29 A; 
#chains in the Genus database with same CATH homology
 5AVS A;  1T5T A;  2IYE A;  3KDP A;  2BY4 A;  1VFP A;  5AVU A;  2DQS A;  3FPS A;  5A3R A;  3W5B A;  2KMV A;  3B9R A;  5AVX A;  2ZBE A;  1MO7 A;  1XP5 A;  2C8L A;  2YJ5 A;  4UU1 A;  5AW4 A;  5AW2 A;  2ZBF A;  4BEV A;  1U7Q A;  4YCN A;  3W5A A;  3BA6 A;  3AR9 A;  3AR2 A;  2KMX A;  4HYT A;  2YJ6 A;  3RFU A;  2EAU A;  3WGV A;  3NAN A;  5AVT A;  5AW3 A;  2ZBD A;  3AR4 A;  3B8E A;  4NAB A;  4RET A;  2EAT A;  3A3Y A;  5A3Q A;  5AW1 A;  5AW9 A;  1T5S A;  3GWI A;  4Y3U A;  1IWO A;  3AR3 A;  4BYG A;  5AW7 A;  3NAL A;  4J2T A;  5AW8 A;  3A1E A;  1MO8 A;  3TLM A;  4RES A;  2YJ3 A;  3N8G A;  5AW5 A;  3J7T A;  2AGV A;  2O9J A;  4UU0 A;  5A3S A;  1Q3I A;  4YCM A;  2ZBG A;  4KYT A;  2OA0 A;  5AVY A;  2C88 A;  5AVR A;  3SKX A;  5AW0 A;  2ZXE A;  5AW6 A;  2EAR A;  3A1D A;  2A00 A;  2C8K A;  3N5K A;  3WGU A;  3AR7 A;  3W5C A;  4YCL A;  3AR8 A;  3FGO A;  1SVJ A;  2C9M A;  5AVZ A;  5AVV A;  4XE5 A;  3NAM A;  1WPG A;  3AR5 A;  4UMV A;  1SU4 A;  3A1C A;  4XOU A;  4BBJ A;  3FPB A;  5AVW A;  3W5D A;  3SKY A;  4H1W A;  2B8E A;  5AVQ A;  2YFY A;  3B9B A;  2ARF A;  2YJ4 A;  4BEW A;  3AR6 A;  2A29 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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