3HB6A

Inactive mutant h54f of proteus mirabilis catalase
Total Genus 141
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
476
structure length
476
Chain Sequence
KKLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMFAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGLPLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNYFSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNYHRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDYFSQPRALYELLSDDEHQRMFARIAGELSQASKETQQRQIDLFTKVHPEYGAGVEKAIKVLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Catalase
publication title Verdoheme formation in Proteus mirabilis catalase.
pubmed doi rcsb
source organism Proteus mirabilis
total genus 141
structure length 476
sequence length 476
ec nomenclature ec 1.11.1.6: Catalase.
pdb deposition date 2009-05-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00199 Catalase Catalase
A PF06628 Catalase-rel Catalase-related immune-responsive
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.180.10 Mainly Beta Beta Barrel Catalase HpII, Chain A, domain 1 Catalase core domain 3hb6A00
1QF7A 3TTTA 4AUNA 1GGEA 2J2MA 4AULA 4ENRA 5BV2P 1A4EA 4AUEA 1E93A 3EJ6A 4ENUA 1NM0A 2XF2A 4QOMA 4BIMA 3DY5A 4ENSA 1P7YA 4QORA 1GWFA 3VU3A 1GWEA 4ENVA 4ENWA 1GG9A 1M85A 4BFLA 4B7AA 1P7ZA 2IQFA 4B2YA 3PQ5A 2A9EA 2ISAA 4QONA 4ENQA 1P81A 3P9SA 1QWSA 4B40A 3P9RA 4E37A 1U5UA 4QOQA 3PQ6A 4ENTA 4ENPA 1SY7A 3TTVA 4QOLA 1CF9A 1F4JA 1M7SA 1HBZA 1QWLA 1MQFA 1GGFA 3P9QA 4AUMA 3ZJ5A 1QWMA 4B31A 1GGKA 1P80A 1SI8A 4QOPA 4CABA 3TTWA 4B5KA 3PQ3A 3PQ2A 1GWHA 3HB6A 1H7KA 3PQ4A 3PQ8A 1H6NA 3P9PA 2IUFA 2CAHA 2CAGA 3TTXA 2XQ1A 1IPHA 3ZJ4A 1GGJA 4QOOA 3PQ7A 1GGHA 4AJ9A 3TTUA
chains in the Genus database with same CATH superfamily
1QF7A 3TTTA 4AUNA 1GGEA 2J2MA 3RGSA 1DGBA 4AULA 4ENRA 5BV2P 7CATA 1A4EA 4AUEA 1E93A 4B7FA 3EJ6A 4ENUA 1NM0A 2XF2A 4QOMA 4BIMA 3RE8A 4BLCA 3DY5A 4ENSA 1TGUA 3J7BA 1P7YA 1DGHB 4QORA 1GWFA 3VU3A 1GWEA 4ENVA 3E4YA 4B7GA 5GKNA 4B7HA 4ENWA 1GG9A 1M85A 4BFLA 4B7AA 1P7ZA 2IQFA 4B2YA 3PQ5A 2A9EA 2ISAA 4QONA 4ENQA 1DGFA 1P81A 3P9SA 1QWSA 4B40A 3P9RA 4E37A 1U5UA 1TH2A 4QOQA 3PQ6A 4ENTA 4ENPA 1SY7A 3TTVA 4QOLA 1CF9A 1TH4A 1F4JA 1M7SA 1HBZA 1QWLA 1MQFA 1GGFA 3P9QA 4AUMA 3ZJ5A 1DGHA 1QWMA 4B31A 3E4WA 1GGKA 1P80A 1SI8A 1TH3A 3RGPA 4QOPA 1QQWA 4CABA 3TTWA 1DGGA 4B5KA 3PQ3A 3PQ2A 1GWHA 3HB6A 3NWLA 1H7KA 3PQ4A 8CATA 3PQ8A 1H6NA 3P9PA 2IUFA 2CAHA 2CAGA 3TTXA 2XQ1A 1IPHA 3ZJ4A 1GGJA 4QOOA 3PQ7A 1GGHA 4AJ9A 3TTUA
chains in the Genus database with same CATH topology
1QF7A 3TTTA 4AUNA 1GGEA 2J2MA 4AULA 4ENRA 5BV2P 1A4EA 4AUEA 1E93A 3EJ6A 4ENUA 1NM0A 2XF2A 4QOMA 4BIMA 3DY5A 4ENSA 1P7YA 4QORA 1GWFA 3VU3A 1GWEA 4ENVA 4ENWA 1GG9A 1M85A 4BFLA 4B7AA 1P7ZA 2IQFA 4B2YA 3PQ5A 2A9EA 2ISAA 4QONA 4ENQA 1P81A 3P9SA 1QWSA 4B40A 3P9RA 4E37A 1U5UA 4QOQA 3PQ6A 4ENTA 4ENPA 1SY7A 3TTVA 4QOLA 1CF9A 1F4JA 1M7SA 1HBZA 1QWLA 1MQFA 1GGFA 3P9QA 4AUMA 3ZJ5A 1QWMA 4B31A 1GGKA 1P80A 1SI8A 4QOPA 4CABA 3TTWA 4B5KA 3PQ3A 3PQ2A 1GWHA 3HB6A 1H7KA 3PQ4A 3PQ8A 1H6NA 3P9PA 2IUFA 2CAHA 2CAGA 3TTXA 2XQ1A 1IPHA 3ZJ4A 1GGJA 4QOOA 3PQ7A 1GGHA 4AJ9A 3TTUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QF7 A;  3TTT A;  4AUN A;  1GGE A;  2J2M A;  4AUL A;  4ENR A;  5BV2 P;  1A4E A;  4AUE A;  1E93 A;  3EJ6 A;  4ENU A;  1NM0 A;  2XF2 A;  4QOM A;  4BIM A;  3DY5 A;  4ENS A;  1P7Y A;  4QOR A;  1GWF A;  3VU3 A;  1GWE A;  4ENV A;  4ENW A;  1GG9 A;  1M85 A;  4BFL A;  4B7A A;  1P7Z A;  2IQF A;  4B2Y A;  3PQ5 A;  2A9E A;  2ISA A;  4QON A;  4ENQ A;  1P81 A;  3P9S A;  1QWS A;  4B40 A;  3P9R A;  4E37 A;  1U5U A;  4QOQ A;  3PQ6 A;  4ENT A;  4ENP A;  1SY7 A;  3TTV A;  4QOL A;  1CF9 A;  1F4J A;  1M7S A;  1HBZ A;  1QWL A;  1MQF A;  1GGF A;  3P9Q A;  4AUM A;  3ZJ5 A;  1QWM A;  4B31 A;  1GGK A;  1P80 A;  1SI8 A;  4QOP A;  4CAB A;  3TTW A;  4B5K A;  3PQ3 A;  3PQ2 A;  1GWH A;  3HB6 A;  1H7K A;  3PQ4 A;  3PQ8 A;  1H6N A;  3P9P A;  2IUF A;  2CAH A;  2CAG A;  3TTX A;  2XQ1 A;  1IPH A;  3ZJ4 A;  1GGJ A;  4QOO A;  3PQ7 A;  1GGH A;  4AJ9 A;  3TTU A; 
#chains in the Genus database with same CATH topology
 1QF7 A;  3TTT A;  4AUN A;  1GGE A;  2J2M A;  3RGS A;  1DGB A;  4AUL A;  4ENR A;  5BV2 P;  7CAT A;  1A4E A;  4AUE A;  1E93 A;  4B7F A;  3EJ6 A;  4ENU A;  1NM0 A;  2XF2 A;  4QOM A;  4BIM A;  3RE8 A;  4BLC A;  3DY5 A;  4ENS A;  1TGU A;  3J7B A;  1P7Y A;  1DGH B;  4QOR A;  1GWF A;  3VU3 A;  1GWE A;  4ENV A;  3E4Y A;  4B7G A;  5GKN A;  4B7H A;  4ENW A;  1GG9 A;  1M85 A;  4BFL A;  4B7A A;  1P7Z A;  2IQF A;  4B2Y A;  3PQ5 A;  2A9E A;  2ISA A;  4QON A;  4ENQ A;  1DGF A;  1P81 A;  3P9S A;  1QWS A;  4B40 A;  3P9R A;  4E37 A;  1U5U A;  1TH2 A;  4QOQ A;  3PQ6 A;  4ENT A;  4ENP A;  1SY7 A;  3TTV A;  4QOL A;  1CF9 A;  1TH4 A;  1F4J A;  1M7S A;  1HBZ A;  1QWL A;  1MQF A;  1GGF A;  3P9Q A;  4AUM A;  3ZJ5 A;  1DGH A;  1QWM A;  4B31 A;  3E4W A;  1GGK A;  1P80 A;  1SI8 A;  1TH3 A;  3RGP A;  4QOP A;  1QQW A;  4CAB A;  3TTW A;  1DGG A;  4B5K A;  3PQ3 A;  3PQ2 A;  1GWH A;  3HB6 A;  3NWL A;  1H7K A;  3PQ4 A;  8CAT A;  3PQ8 A;  1H6N A;  3P9P A;  2IUF A;  2CAH A;  2CAG A;  3TTX A;  2XQ1 A;  1IPH A;  3ZJ4 A;  1GGJ A;  4QOO A;  3PQ7 A;  1GGH A;  4AJ9 A;  3TTU A; 
#chains in the Genus database with same CATH homology
 1QF7 A;  3TTT A;  4AUN A;  1GGE A;  2J2M A;  4AUL A;  4ENR A;  5BV2 P;  1A4E A;  4AUE A;  1E93 A;  3EJ6 A;  4ENU A;  1NM0 A;  2XF2 A;  4QOM A;  4BIM A;  3DY5 A;  4ENS A;  1P7Y A;  4QOR A;  1GWF A;  3VU3 A;  1GWE A;  4ENV A;  4ENW A;  1GG9 A;  1M85 A;  4BFL A;  4B7A A;  1P7Z A;  2IQF A;  4B2Y A;  3PQ5 A;  2A9E A;  2ISA A;  4QON A;  4ENQ A;  1P81 A;  3P9S A;  1QWS A;  4B40 A;  3P9R A;  4E37 A;  1U5U A;  4QOQ A;  3PQ6 A;  4ENT A;  4ENP A;  1SY7 A;  3TTV A;  4QOL A;  1CF9 A;  1F4J A;  1M7S A;  1HBZ A;  1QWL A;  1MQF A;  1GGF A;  3P9Q A;  4AUM A;  3ZJ5 A;  1QWM A;  4B31 A;  1GGK A;  1P80 A;  1SI8 A;  4QOP A;  4CAB A;  3TTW A;  4B5K A;  3PQ3 A;  3PQ2 A;  1GWH A;  3HB6 A;  1H7K A;  3PQ4 A;  3PQ8 A;  1H6N A;  3P9P A;  2IUF A;  2CAH A;  2CAG A;  3TTX A;  2XQ1 A;  1IPH A;  3ZJ4 A;  1GGJ A;  4QOO A;  3PQ7 A;  1GGH A;  4AJ9 A;  3TTU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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