3I1HA

Crystal structure of human bfl-1 in complex with bak bh3 peptide
Total Genus 52
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
52
sequence length
147
structure length
141
Chain Sequence
CEFGYIYRLAQDYLQVLQIPPSKTSRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGIINWGRIVTIFAFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWENGFVKKFEP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Apoptosis
molecule keywords Protein BFL-1
publication title crystal structure of human BFL-1 in complex with BAK BH3 peptide
rcsb
source organism Homo sapiens
total genus 52
structure length 141
sequence length 147
ec nomenclature
pdb deposition date 2009-06-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00452 Bcl-2 Apoptosis regulator proteins, Bcl-2 family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.437.10 Mainly Alpha Orthogonal Bundle Apoptosis Regulator Bcl-x Blc2-like 3i1hA00
2BZWA 2O2MA 1F16A 5JSBA 4BPIA 3IHCA 2VOHA 2V6QA 1LXLA 1R2IA 4K5BC 3CVAX 3WIYA 5FC4A 1R2DA 1OHUA 1R2GA 3QBRA 4ZIGA 4OQ5A 4BD2A 1WSXA 2RODA 4HW3A 5C6HA 4G35A 1R2EA 2ROCA 1PQ0A 3MQPA 5KTGA 1YSNA 1O0LA 2O2FA 2KBWA 2XA0A 3DVUA 1TY4A 1BXLA 4HW4A 2WH6A 4WMRA 2KUAA 2VOGA 2VOFA 1ZY3A 4ZIEA 4BDUA 3IHEA 3IIGA 3MK8A 2VM6A 4S0PA 3ILCA 3WIXA 1AF3A 5FMIA 1PQ1A 4BD7A 2K7WA 2JCNA 3BL2A 4OQ6A 4OYDA 1MAZA 3IHDA 5C3FA 4ZBFA 4ZIFA 4S0OA 2IMSA 4ZIIA 4HW2A 4MI8A 3KJ2A 4QVXA 1G5MA 2ME8A 2O22A 4U2VA 4QNQA 1GJHA 4B4SA 4YK9A 2XPXA 1MK3A 2IMTA 2VOIA 5KU9A 1K3KA 2LR1A 1R2HA 1Q59A 2ABOA 2PQKA 2JM6B 1G5JA 4BPJA 3D7VA 3IO9A 3KJ0A 2M5BA 5FDOA 2YV6A 2BIDA 2B48A 1YSGA 4BD6A 3PK1A 3I1HA 3KJ1A 4YJ4A 4ZIHA 2O21A 5IF4A 4U2UA 2O2NA 2A5YA 4ZEQA 1DDBA 2MHSA 3KZ0A 3IIHA 2MEJA 1YSWA 2W3LA 4BD8A 2NL9A 4ZBIA 2NLAA 5FDRA 5IEZA 1YSIA
chains in the Genus database with same CATH superfamily
2BZWA 2O2MA 1F16A 5JSBA 4BPIA 3IHCA 2VOHA 2V6QA 1LXLA 1R2IA 2O42A 4K5BC 3CVAX 3WIYA 5FC4A 1R2DA 1OHUA 1R2GA 3QBRA 4ZIGA 4OQ5A 4BD2A 1WSXA 2RODA 4HW3A 5C6HA 4G35A 1R2EA 4D2LA 2ROCA 4BBDA 1PQ0A 3MQPA 5KTGA 1YSNA 1O0LA 2O2FA 4UF3A 2KBWA 2XA0A 3DVUA 1TY4A 1BXLA 4HW4A 2WH6A 4M0SA 4WMRA 2KUAA 2VOGA 2VOFA 1ZY3A 4ZIEA 4BDUA 3IHEA 4UF2A 3IIGA 3MK8A 2VM6A 4S0PA 3ILCA 3WIXA 1AF3A 5FMIA 1PQ1A 4BD7A 2K7WA 2JCNA 3BL2A 4OQ6A 4OYDA 1MAZA 2I39A 3IHDA 5C3FA 4ZBFA 4ZIFA 4S0OA 2IMSA 4ZIIA 4HW2A 4MI8A 3KJ2A 4QVXA 1G5MA 2ME8A 2O22A 4U2VA 4QNQA 2UXEA 1GJHA 4B4SA 4YK9A 2XPXA 1MK3A 2IMTA 2VOIA 5KU9A 1K3KA 4D2MA 2LR1A 1R2HA 1Q59A 2ABOA 2PQKA 2JM6B 1G5JA 3JRVA 4BPJA 3D7VA 3IO9A 3KJ0A 2M5BA 5FDOA 2YV6A 2BIDA 4BBBA 2B48A 1YSGA 2JBYA 4BD6A 3PK1A 3I1HA 3KJ1A 4YJ4A 4ZIHA 2O21A 5IF4A 2K36A 4U2UA 2O2NA 2A5YA 4ZEQA 1DDBA 2MHSA 2JBXA 2VVXA 3KZ0A 3IIHA 2MEJA 4BBCA 1YSWA 2W3LA 2VTYA 4LQKA 2VVYA 4BD8A 2NL9A 4ZBIA 4UF1A 2NLAA 2VVWA 5FDRA 5IEZA 1YSIA
chains in the Genus database with same CATH topology
2BZWA 2O2MA 1F16A 5JSBA 4BPIA 3IHCA 2VOHA 2V6QA 1LXLA 1R2IA 4K5BC 3CVAX 3WIYA 5FC4A 1R2DA 1OHUA 1R2GA 3QBRA 4ZIGA 4OQ5A 4BD2A 1WSXA 2RODA 4HW3A 5C6HA 4G35A 1R2EA 2ROCA 1PQ0A 3MQPA 5KTGA 1YSNA 1O0LA 2O2FA 2KBWA 2XA0A 3DVUA 1TY4A 1BXLA 4HW4A 2WH6A 4WMRA 2KUAA 2VOGA 2VOFA 1ZY3A 4ZIEA 4BDUA 3IHEA 3IIGA 3MK8A 2VM6A 4S0PA 3ILCA 3WIXA 1AF3A 5FMIA 1PQ1A 4BD7A 2K7WA 2JCNA 3BL2A 4OQ6A 4OYDA 1MAZA 3IHDA 5C3FA 4ZBFA 4ZIFA 4S0OA 2IMSA 4ZIIA 4HW2A 4MI8A 3KJ2A 4QVXA 1G5MA 2ME8A 2O22A 4U2VA 4QNQA 1GJHA 4B4SA 4YK9A 2XPXA 1MK3A 2IMTA 2VOIA 5KU9A 1K3KA 2LR1A 1R2HA 1Q59A 2ABOA 2PQKA 2JM6B 1G5JA 4BPJA 3D7VA 3IO9A 3KJ0A 2M5BA 5FDOA 2YV6A 2BIDA 2B48A 1YSGA 4BD6A 3PK1A 3I1HA 3KJ1A 4YJ4A 4ZIHA 2O21A 5IF4A 4U2UA 2O2NA 2A5YA 4ZEQA 1DDBA 2MHSA 3KZ0A 3IIHA 2MEJA 1YSWA 2W3LA 4BD8A 2NL9A 4ZBIA 2NLAA 5FDRA 5IEZA 1YSIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BZW A;  2O2M A;  1F16 A;  5JSB A;  4BPI A;  3IHC A;  2VOH A;  2V6Q A;  1LXL A;  1R2I A;  4K5B C;  3CVA X;  3WIY A;  5FC4 A;  1R2D A;  1OHU A;  1R2G A;  3QBR A;  4ZIG A;  4OQ5 A;  4BD2 A;  1WSX A;  2ROD A;  4HW3 A;  5C6H A;  4G35 A;  1R2E A;  2ROC A;  1PQ0 A;  3MQP A;  5KTG A;  1YSN A;  1O0L A;  2O2F A;  2KBW A;  2XA0 A;  3DVU A;  1TY4 A;  1BXL A;  4HW4 A;  2WH6 A;  4WMR A;  2KUA A;  2VOG A;  2VOF A;  1ZY3 A;  4ZIE A;  4BDU A;  3IHE A;  3IIG A;  3MK8 A;  2VM6 A;  4S0P A;  3ILC A;  3WIX A;  1AF3 A;  5FMI A;  1PQ1 A;  4BD7 A;  2K7W A;  2JCN A;  3BL2 A;  4OQ6 A;  4OYD A;  1MAZ A;  3IHD A;  5C3F A;  4ZBF A;  4ZIF A;  4S0O A;  2IMS A;  4ZII A;  4HW2 A;  4MI8 A;  3KJ2 A;  4QVX A;  1G5M A;  2ME8 A;  2O22 A;  4U2V A;  4QNQ A;  1GJH A;  4B4S A;  4YK9 A;  2XPX A;  1MK3 A;  2IMT A;  2VOI A;  5KU9 A;  1K3K A;  2LR1 A;  1R2H A;  1Q59 A;  2ABO A;  2PQK A;  2JM6 B;  1G5J A;  4BPJ A;  3D7V A;  3IO9 A;  3KJ0 A;  2M5B A;  5FDO A;  2YV6 A;  2BID A;  2B48 A;  1YSG A;  4BD6 A;  3PK1 A;  3I1H A;  3KJ1 A;  4YJ4 A;  4ZIH A;  2O21 A;  5IF4 A;  4U2U A;  2O2N A;  2A5Y A;  4ZEQ A;  1DDB A;  2MHS A;  3KZ0 A;  3IIH A;  2MEJ A;  1YSW A;  2W3L A;  4BD8 A;  2NL9 A;  4ZBI A;  2NLA A;  5FDR A;  5IEZ A;  1YSI A; 
#chains in the Genus database with same CATH topology
 2BZW A;  2O2M A;  1F16 A;  5JSB A;  4BPI A;  3IHC A;  2VOH A;  2V6Q A;  1LXL A;  1R2I A;  2O42 A;  4K5B C;  3CVA X;  3WIY A;  5FC4 A;  1R2D A;  1OHU A;  1R2G A;  3QBR A;  4ZIG A;  4OQ5 A;  4BD2 A;  1WSX A;  2ROD A;  4HW3 A;  5C6H A;  4G35 A;  1R2E A;  4D2L A;  2ROC A;  4BBD A;  1PQ0 A;  3MQP A;  5KTG A;  1YSN A;  1O0L A;  2O2F A;  4UF3 A;  2KBW A;  2XA0 A;  3DVU A;  1TY4 A;  1BXL A;  4HW4 A;  2WH6 A;  4M0S A;  4WMR A;  2KUA A;  2VOG A;  2VOF A;  1ZY3 A;  4ZIE A;  4BDU A;  3IHE A;  4UF2 A;  3IIG A;  3MK8 A;  2VM6 A;  4S0P A;  3ILC A;  3WIX A;  1AF3 A;  5FMI A;  1PQ1 A;  4BD7 A;  2K7W A;  2JCN A;  3BL2 A;  4OQ6 A;  4OYD A;  1MAZ A;  2I39 A;  3IHD A;  5C3F A;  4ZBF A;  4ZIF A;  4S0O A;  2IMS A;  4ZII A;  4HW2 A;  4MI8 A;  3KJ2 A;  4QVX A;  1G5M A;  2ME8 A;  2O22 A;  4U2V A;  4QNQ A;  2UXE A;  1GJH A;  4B4S A;  4YK9 A;  2XPX A;  1MK3 A;  2IMT A;  2VOI A;  5KU9 A;  1K3K A;  4D2M A;  2LR1 A;  1R2H A;  1Q59 A;  2ABO A;  2PQK A;  2JM6 B;  1G5J A;  3JRV A;  4BPJ A;  3D7V A;  3IO9 A;  3KJ0 A;  2M5B A;  5FDO A;  2YV6 A;  2BID A;  4BBB A;  2B48 A;  1YSG A;  2JBY A;  4BD6 A;  3PK1 A;  3I1H A;  3KJ1 A;  4YJ4 A;  4ZIH A;  2O21 A;  5IF4 A;  2K36 A;  4U2U A;  2O2N A;  2A5Y A;  4ZEQ A;  1DDB A;  2MHS A;  2JBX A;  2VVX A;  3KZ0 A;  3IIH A;  2MEJ A;  4BBC A;  1YSW A;  2W3L A;  2VTY A;  4LQK A;  2VVY A;  4BD8 A;  2NL9 A;  4ZBI A;  4UF1 A;  2NLA A;  2VVW A;  5FDR A;  5IEZ A;  1YSI A; 
#chains in the Genus database with same CATH homology
 2BZW A;  2O2M A;  1F16 A;  5JSB A;  4BPI A;  3IHC A;  2VOH A;  2V6Q A;  1LXL A;  1R2I A;  4K5B C;  3CVA X;  3WIY A;  5FC4 A;  1R2D A;  1OHU A;  1R2G A;  3QBR A;  4ZIG A;  4OQ5 A;  4BD2 A;  1WSX A;  2ROD A;  4HW3 A;  5C6H A;  4G35 A;  1R2E A;  2ROC A;  1PQ0 A;  3MQP A;  5KTG A;  1YSN A;  1O0L A;  2O2F A;  2KBW A;  2XA0 A;  3DVU A;  1TY4 A;  1BXL A;  4HW4 A;  2WH6 A;  4WMR A;  2KUA A;  2VOG A;  2VOF A;  1ZY3 A;  4ZIE A;  4BDU A;  3IHE A;  3IIG A;  3MK8 A;  2VM6 A;  4S0P A;  3ILC A;  3WIX A;  1AF3 A;  5FMI A;  1PQ1 A;  4BD7 A;  2K7W A;  2JCN A;  3BL2 A;  4OQ6 A;  4OYD A;  1MAZ A;  3IHD A;  5C3F A;  4ZBF A;  4ZIF A;  4S0O A;  2IMS A;  4ZII A;  4HW2 A;  4MI8 A;  3KJ2 A;  4QVX A;  1G5M A;  2ME8 A;  2O22 A;  4U2V A;  4QNQ A;  1GJH A;  4B4S A;  4YK9 A;  2XPX A;  1MK3 A;  2IMT A;  2VOI A;  5KU9 A;  1K3K A;  2LR1 A;  1R2H A;  1Q59 A;  2ABO A;  2PQK A;  2JM6 B;  1G5J A;  4BPJ A;  3D7V A;  3IO9 A;  3KJ0 A;  2M5B A;  5FDO A;  2YV6 A;  2BID A;  2B48 A;  1YSG A;  4BD6 A;  3PK1 A;  3I1H A;  3KJ1 A;  4YJ4 A;  4ZIH A;  2O21 A;  5IF4 A;  4U2U A;  2O2N A;  2A5Y A;  4ZEQ A;  1DDB A;  2MHS A;  3KZ0 A;  3IIH A;  2MEJ A;  1YSW A;  2W3L A;  4BD8 A;  2NL9 A;  4ZBI A;  2NLA A;  5FDR A;  5IEZ A;  1YSI A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...