3I2VA

Crystal structure of human mocs3 rhodanese-like domain
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
127
structure length
124
Chain Sequence
SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHALHIPLKHLERRDAESLKLLKEAIWEEKQGTAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGTFPQY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Adenylyltransferase and sulfurtransferase MOCS3
publication title Crystal structure of the human MOCS3 rhodanese-like domain
rcsb
source organism Homo sapiens
total genus 41
structure length 124
sequence length 127
ec nomenclature ec 2.7.7.80: Molybdopterin-synthase adenylyltransferase.
pdb deposition date 2009-06-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 3i2vA00
3NT6A 3P3AA 1YM9A 1RHSA 3TG3A 5HPAA 3ICSA 3ILMA 2K0ZA 1T3KA 3AAYA 2JTSA 4WH7A 3TP9A 2UZQA 1BOIA 2EG4B 3K9RA 2IFVA 5HBQA 2FSXA 5LAMA 1YMLA 3IPOA 2MOLA 1ORBA 3FOJA 3OP3A 1URHA 3HZUA 2GWFA 4WH9A 2JTQA 1H4MX 1GMXA 3AAXA 3O3WA 2KL3A 3GK5A 3MZZA 3IWHA 3FS5A 2WLRA 2VSWA 1WV9A 1OKGA 3F4AA 1E0CA 3NTAA 1YT8A 3R2UA 5HBOA 3ICTA 1YMKA 1H4KX 5HBLA 1VEEA 2EG4A 1BOHA 3HWIA 3NTDA 3TG1B 1YMDA 1YS0A 1RHDA 1HZMA 4JGTA 2J6PA 1C25A 1CWRA 1WHBA 1TQ1A 3G5JA 5HBPA 2ORAA 4F67A 3I3UA 3ICRA 1DP2A 1GN0A 2MRMA 1QB0A 2HHGA 2DCQA 3FNJA 2OUCA 3NHVA 3IPPA 3HIXA 2MOIA 1UARA 3D1PA 5LAOA 3OLHA 2IFDA 2WLXA 1CWTA 1QXNA 2A2KA 2JTRA 3FLHA 3UTNX 3I2VA 1CWSA 2EG3A 4OCGA
chains in the Genus database with same CATH superfamily
3NT6A 3P3AA 1YM9A 1RHSA 3TG3A 5HPAA 3ICSA 3ILMA 2K0ZA 1T3KA 3AAYA 2JTSA 4WH7A 3TP9A 2UZQA 1BOIA 2EG4B 3K9RA 2IFVA 5HBQA 2FSXA 5LAMA 1YMLA 3IPOA 2MOLA 1ORBA 3FOJA 3OP3A 1URHA 3HZUA 2GWFA 4WH9A 2JTQA 1H4MX 1GMXA 3AAXA 3O3WA 2KL3A 3GK5A 3MZZA 3IWHA 3FS5A 2WLRA 2VSWA 1WV9A 1OKGA 3F4AA 1E0CA 3NTAA 1YT8A 3R2UA 5HBOA 3ICTA 1YMKA 1H4KX 5HBLA 1VEEA 2EG4A 1BOHA 3HWIA 3NTDA 3TG1B 2Q82A 1YMDA 1YS0A 1RHDA 1HZMA 4JGTA 2J6PA 1C25A 1CWRA 1WHBA 1TQ1A 3G5JA 5HBPA 2ORAA 4F67A 3I3UA 3ICRA 1DP2A 1GN0A 2MRMA 1QB0A 2HHGA 2DCQA 3FNJA 2OUCA 3NHVA 3IPPA 3HIXA 2MOIA 1UARA 3D1PA 5LAOA 3OLHA 2IFDA 2WLXA 1CWTA 1QXNA 2A2KA 2JTRA 3FLHA 3UTNX 3I2VA 1CWSA 2EG3A 4OCGA
chains in the Genus database with same CATH topology
3NT6A 3P3AA 1YM9A 1RHSA 3TG3A 5HPAA 3ICSA 3ILMA 2K0ZA 1T3KA 3AAYA 2JTSA 4WH7A 3TP9A 2UZQA 1BOIA 2EG4B 3K9RA 2IFVA 5HBQA 2FSXA 5LAMA 1YMLA 3IPOA 2MOLA 1ORBA 3FOJA 3OP3A 1URHA 3HZUA 2GWFA 4WH9A 2JTQA 1H4MX 1GMXA 3AAXA 3O3WA 2KL3A 3GK5A 3MZZA 3IWHA 3FS5A 2WLRA 2VSWA 1WV9A 1OKGA 3F4AA 1E0CA 3NTAA 1YT8A 3R2UA 5HBOA 3ICTA 1YMKA 1H4KX 5HBLA 1VEEA 2EG4A 1BOHA 3HWIA 3NTDA 3TG1B 1YMDA 1YS0A 1RHDA 1HZMA 4JGTA 2J6PA 1C25A 1CWRA 1WHBA 1TQ1A 3G5JA 5HBPA 2ORAA 4F67A 3I3UA 3ICRA 1DP2A 1GN0A 2MRMA 1QB0A 2HHGA 2DCQA 3FNJA 2OUCA 3NHVA 3IPPA 3HIXA 2MOIA 1UARA 3D1PA 5LAOA 3OLHA 2IFDA 2WLXA 1CWTA 1QXNA 2A2KA 2JTRA 3FLHA 3UTNX 3I2VA 1CWSA 2EG3A 4OCGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NT6 A;  3P3A A;  1YM9 A;  1RHS A;  3TG3 A;  5HPA A;  3ICS A;  3ILM A;  2K0Z A;  1T3K A;  3AAY A;  2JTS A;  4WH7 A;  3TP9 A;  2UZQ A;  1BOI A;  2EG4 B;  3K9R A;  2IFV A;  5HBQ A;  2FSX A;  5LAM A;  1YML A;  3IPO A;  2MOL A;  1ORB A;  3FOJ A;  3OP3 A;  1URH A;  3HZU A;  2GWF A;  4WH9 A;  2JTQ A;  1H4M X;  1GMX A;  3AAX A;  3O3W A;  2KL3 A;  3GK5 A;  3MZZ A;  3IWH A;  3FS5 A;  2WLR A;  2VSW A;  1WV9 A;  1OKG A;  3F4A A;  1E0C A;  3NTA A;  1YT8 A;  3R2U A;  5HBO A;  3ICT A;  1YMK A;  1H4K X;  5HBL A;  1VEE A;  2EG4 A;  1BOH A;  3HWI A;  3NTD A;  3TG1 B;  1YMD A;  1YS0 A;  1RHD A;  1HZM A;  4JGT A;  2J6P A;  1C25 A;  1CWR A;  1WHB A;  1TQ1 A;  3G5J A;  5HBP A;  2ORA A;  4F67 A;  3I3U A;  3ICR A;  1DP2 A;  1GN0 A;  2MRM A;  1QB0 A;  2HHG A;  2DCQ A;  3FNJ A;  2OUC A;  3NHV A;  3IPP A;  3HIX A;  2MOI A;  1UAR A;  3D1P A;  5LAO A;  3OLH A;  2IFD A;  2WLX A;  1CWT A;  1QXN A;  2A2K A;  2JTR A;  3FLH A;  3UTN X;  3I2V A;  1CWS A;  2EG3 A;  4OCG A; 
#chains in the Genus database with same CATH topology
 3NT6 A;  3P3A A;  1YM9 A;  1RHS A;  3TG3 A;  5HPA A;  3ICS A;  3ILM A;  2K0Z A;  1T3K A;  3AAY A;  2JTS A;  4WH7 A;  3TP9 A;  2UZQ A;  1BOI A;  2EG4 B;  3K9R A;  2IFV A;  5HBQ A;  2FSX A;  5LAM A;  1YML A;  3IPO A;  2MOL A;  1ORB A;  3FOJ A;  3OP3 A;  1URH A;  3HZU A;  2GWF A;  4WH9 A;  2JTQ A;  1H4M X;  1GMX A;  3AAX A;  3O3W A;  2KL3 A;  3GK5 A;  3MZZ A;  3IWH A;  3FS5 A;  2WLR A;  2VSW A;  1WV9 A;  1OKG A;  3F4A A;  1E0C A;  3NTA A;  1YT8 A;  3R2U A;  5HBO A;  3ICT A;  1YMK A;  1H4K X;  5HBL A;  1VEE A;  2EG4 A;  1BOH A;  3HWI A;  3NTD A;  3TG1 B;  2Q82 A;  1YMD A;  1YS0 A;  1RHD A;  1HZM A;  4JGT A;  2J6P A;  1C25 A;  1CWR A;  1WHB A;  1TQ1 A;  3G5J A;  5HBP A;  2ORA A;  4F67 A;  3I3U A;  3ICR A;  1DP2 A;  1GN0 A;  2MRM A;  1QB0 A;  2HHG A;  2DCQ A;  3FNJ A;  2OUC A;  3NHV A;  3IPP A;  3HIX A;  2MOI A;  1UAR A;  3D1P A;  5LAO A;  3OLH A;  2IFD A;  2WLX A;  1CWT A;  1QXN A;  2A2K A;  2JTR A;  3FLH A;  3UTN X;  3I2V A;  1CWS A;  2EG3 A;  4OCG A; 
#chains in the Genus database with same CATH homology
 3NT6 A;  3P3A A;  1YM9 A;  1RHS A;  3TG3 A;  5HPA A;  3ICS A;  3ILM A;  2K0Z A;  1T3K A;  3AAY A;  2JTS A;  4WH7 A;  3TP9 A;  2UZQ A;  1BOI A;  2EG4 B;  3K9R A;  2IFV A;  5HBQ A;  2FSX A;  5LAM A;  1YML A;  3IPO A;  2MOL A;  1ORB A;  3FOJ A;  3OP3 A;  1URH A;  3HZU A;  2GWF A;  4WH9 A;  2JTQ A;  1H4M X;  1GMX A;  3AAX A;  3O3W A;  2KL3 A;  3GK5 A;  3MZZ A;  3IWH A;  3FS5 A;  2WLR A;  2VSW A;  1WV9 A;  1OKG A;  3F4A A;  1E0C A;  3NTA A;  1YT8 A;  3R2U A;  5HBO A;  3ICT A;  1YMK A;  1H4K X;  5HBL A;  1VEE A;  2EG4 A;  1BOH A;  3HWI A;  3NTD A;  3TG1 B;  1YMD A;  1YS0 A;  1RHD A;  1HZM A;  4JGT A;  2J6P A;  1C25 A;  1CWR A;  1WHB A;  1TQ1 A;  3G5J A;  5HBP A;  2ORA A;  4F67 A;  3I3U A;  3ICR A;  1DP2 A;  1GN0 A;  2MRM A;  1QB0 A;  2HHG A;  2DCQ A;  3FNJ A;  2OUC A;  3NHV A;  3IPP A;  3HIX A;  2MOI A;  1UAR A;  3D1P A;  5LAO A;  3OLH A;  2IFD A;  2WLX A;  1CWT A;  1QXN A;  2A2K A;  2JTR A;  3FLH A;  3UTN X;  3I2V A;  1CWS A;  2EG3 A;  4OCG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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