3ICFA

Structure of protein serine/threonine phosphatase from saccharomyces cerevisiae with similarity to human phosphatase pp5
Total Genus 107
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
107
sequence length
318
structure length
316
Chain Sequence
MSQEFISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFEDECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPRDGAFMELLWADPQEANGMGPSQRGHAFGPDITDRFLRNNKLRKIFRSHELRMGGVQFEQKGKLMTVFSAPNYCDSQGNLGGVIHVVPGHGILQAGRNDDQNLIIETFEAVEHPDIKPMAYS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Serine/threonine-protein phosphatase T
publication title Structure of Protein serine/threonine phosphatase from Saccharomyces cerevisiae with similarity to human phosphatase PP5
rcsb
source organism Saccharomyces cerevisiae
total genus 107
structure length 316
sequence length 318
chains with identical sequence B
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2009-07-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3icfA00
3E7BA 4H2GA 4ORCA 4V0VA 2DFJA 3V4YA 2WDFA 2AHDA 4ORBA 3TGHA 1AUIA 4V0WA 3K7VC 4F0ZA 4UWQA 3H62B 2QJCA 1NNWA 2NXFA 4JA9A 4UT3A 3H66A 1M63A 3N5UA 1T71A 3JYFA 3C5WC 3GVEA 2CV9A 1S95A 4MOVA 2QFPA 4H2FA 4IL1A 3QFOA 2Q8UA 4H2BA 4ZVZA 5EQVA 5INBA 4O43A 4H1YP 2O8AA 4O4KA 4OR9A 2WDEA 2NPPC 3E7AA 1SU1A 2GJUA 2NYLC 4ORAA 2HYOA 1KBPA 3RQZA 4DSYA 1HO5A 3IVEA 3IB7A 4NZVA 5GTUA 3DW8C 3IVDA 4MOYA 4B2OA 3K7WC 2HYPA 3FGAC 4O24A 3H60A 4M0VA 3H67A 2BQ8X 3QG5C 4FBWA 1OIEA 3QFNA 3P71C 1IT6A 1U32A 3HVQA 5HPEA 2HY1A 2BDXA 3QFKA 3T1IA 4I5LC 1MF8A 4DHLA 3EGHA 2IE4C 4TUGA 4LACC 1XZWA 3PSNA 4I5NC 4TUIA 1WARA 4O5GA 3H61A 1WAO1 1XM7A 3H63A 5IOHA 4KBPA 3THNA 1HPUA 2JOGA 1UTEA 4LU9A 3KBPA 4J6OA 5F3WA 1OIDA 1S3LA 3H69A 2A22A 2KKNA 3AUZA 4FBQA 3RL3A 4XPNA 1TCOA 4FCXA 4HD0A 2NYMC 4ZX2A 4Q7FA 3CK2A 1QFCA 2Z1AA 1FJMA 2R17A 4H1SA 2Z06A 1S8EA 1Z2WA 1OI8A 1S3MA 1UF3A 1G5BA 2USHA 3ICFA 4UT2A 1HP1A 2WDCA 4DT2A 5B8IA 3C9FA 4UT3B 5JPFA 4FBKA 4IYPC 5JPEA 4KKZA 4G9JA 2P6BA 2XMOA 4LTYA 2O8GA 1II7A 3H64A 1S3NA 3RL5A 4WWLA 1JK7A 2BCDA 3QFMA 2Z72A 1T70A 1Z2XA 5C1VA 4H2IA 2IAEC 1V73A 2ZBMA 3EGGA 5J28A 4YKEA 2YVTA 2WDDA 3ZTVA 1W24A 3H68A 5JJTA 3ZU0A 2QFRA 3IB8A 3AV0A 5DNYA 4MP0A 2IE3C 3RL4A 1S70A 3LL8A 3THOB 3PSOA 3DSDA 1QHWA 3DSCA 1USHA 4JA7A 4V0XA
chains in the Genus database with same CATH superfamily
3E7BA 4H2GA 4ORCA 4V0VA 2DFJA 3V4YA 2WDFA 2AHDA 4ORBA 3TGHA 1AUIA 4V0WA 3K7VC 4F0ZA 4UWQA 3H62B 2QJCA 1NNWA 2NXFA 4JA9A 4UT3A 3H66A 1M63A 3N5UA 1T71A 3JYFA 3C5WC 3GVEA 2CV9A 1S95A 4MOVA 2QFPA 4H2FA 4IL1A 3QFOA 2Q8UA 4H2BA 4ZVZA 5EQVA 5INBA 4O43A 4H1YP 2O8AA 4O4KA 4OR9A 2WDEA 2NPPC 3E7AA 1SU1A 2GJUA 2NYLC 4ORAA 2DXNA 2HYOA 1KBPA 3RQZA 4DSYA 1HO5A 2YEQA 3IB7A 3IVEA 4NZVA 5GTUA 3DW8C 3IVDA 4MOYA 4B2OA 3K7WC 2HYPA 3FGAC 4O24A 3H60A 4M0VA 3H67A 2BQ8X 3QG5C 4FBWA 1OIEA 3QFNA 3P71C 1IT6A 1U32A 3HVQA 5HPEA 2HY1A 2BDXA 3QFKA 3T1IA 4I5LC 1MF8A 4DHLA 3EGHA 2IE4C 4TUGA 4LACC 1XZWA 3PSNA 4I5NC 4TUIA 1WARA 4O5GA 3H61A 1WAO1 1XM7A 3H63A 5IOHA 4KBPA 3THNA 1HPUA 2JOGA 1UTEA 4LU9A 3KBPA 4J6OA 5F3WA 1OIDA 1S3LA 3H69A 2A22A 2KKNA 3AUZA 4FBQA 2ZOAA 3RL3A 4XPNA 1TCOA 4FCXA 4HD0A 2NYMC 4ZX2A 4Q7FA 3CK2A 1QFCA 3FLOA 2Z1AA 1FJMA 2R17A 4H1SA 2Z06A 1S8EA 1Z2WA 1OI8A 1S3MA 1UF3A 1G5BA 2USHA 3ICFA 3E0JA 1HP1A 2WDCA 4UT2A 4DT2A 2ZO9B 5B8IA 3C9FA 4UT3B 5JPFA 4FBKA 4IYPC 5JPEA 4KKZA 4G9JA 2P6BA 2XMOA 4LTYA 2O8GA 1II7A 3H64A 1S3NA 3RL5A 4WWLA 1JK7A 2BCDA 3QFMA 2Z72A 1T70A 1Z2XA 5C1VA 4H2IA 2IAEC 1V73A 2ZBMA 3EGGA 5J28A 4YKEA 2YVTA 2WDDA 3ZTVA 1W24A 3H68A 5JJTA 3ZU0A 2QFRA 3IB8A 3AV0A 3D03A 5DNYA 4MP0A 2IE3C 3RL4A 1S70A 3LL8A 3THOB 3PSOA 3DSDA 1QHWA 3DSCA 2DXLA 1USHA 4JA7A 4V0XA
chains in the Genus database with same CATH topology
3E7BA 4H2GA 4ORCA 4V0VA 2DFJA 3V4YA 2WDFA 2AHDA 4ORBA 3TGHA 1AUIA 4V0WA 3K7VC 4F0ZA 4UWQA 3H62B 2QJCA 1NNWA 2NXFA 4JA9A 4UT3A 3H66A 1M63A 3N5UA 1T71A 3JYFA 3C5WC 3GVEA 2CV9A 1S95A 4MOVA 2QFPA 4H2FA 4IL1A 3QFOA 2Q8UA 4H2BA 4ZVZA 5EQVA 5INBA 4O43A 4H1YP 2O8AA 4O4KA 4OR9A 2WDEA 2NPPC 3E7AA 1SU1A 2GJUA 2NYLC 4ORAA 2DXNA 2HYOA 1KBPA 3RQZA 4DSYA 1HO5A 2YEQA 3IB7A 3IVEA 4NZVA 5GTUA 3DW8C 3IVDA 4MOYA 4B2OA 3K7WC 2HYPA 3FGAC 4O24A 3H60A 4M0VA 3H67A 2BQ8X 3QG5C 4FBWA 1OIEA 3QFNA 3P71C 1IT6A 1U32A 3HVQA 5HPEA 2HY1A 2BDXA 3QFKA 3T1IA 4I5LC 1MF8A 4DHLA 3EGHA 2IE4C 4TUGA 4LACC 1XZWA 3PSNA 4I5NC 4TUIA 1WARA 4O5GA 3H61A 1WAO1 1XM7A 3H63A 5IOHA 4KBPA 3THNA 1HPUA 2JOGA 1UTEA 4LU9A 3KBPA 4J6OA 5F3WA 1OIDA 1S3LA 3H69A 2A22A 2KKNA 3AUZA 4FBQA 2ZOAA 3RL3A 4XPNA 1TCOA 4FCXA 4HD0A 2NYMC 4ZX2A 4Q7FA 3CK2A 1QFCA 3FLOA 2Z1AA 1FJMA 2R17A 4H1SA 2Z06A 1S8EA 1Z2WA 1OI8A 1S3MA 1UF3A 1G5BA 2USHA 3ICFA 3E0JA 1HP1A 2WDCA 4UT2A 4DT2A 2ZO9B 5B8IA 3C9FA 4UT3B 5JPFA 4FBKA 4IYPC 5JPEA 4KKZA 4G9JA 2P6BA 2XMOA 4LTYA 2O8GA 1II7A 3H64A 1S3NA 3RL5A 4WWLA 1JK7A 2BCDA 3QFMA 2Z72A 1T70A 1Z2XA 5C1VA 4H2IA 2IAEC 1V73A 2ZBMA 3EGGA 5J28A 4YKEA 2YVTA 2WDDA 3ZTVA 1W24A 3H68A 5JJTA 3ZU0A 2QFRA 3IB8A 3AV0A 3D03A 5DNYA 4MP0A 2IE3C 3RL4A 1S70A 3LL8A 3THOB 3PSOA 3DSDA 1QHWA 3DSCA 2DXLA 1USHA 4JA7A 4V0XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3E7B A;  4H2G A;  4ORC A;  4V0V A;  2DFJ A;  3V4Y A;  2WDF A;  2AHD A;  4ORB A;  3TGH A;  1AUI A;  4V0W A;  3K7V C;  4F0Z A;  4UWQ A;  3H62 B;  2QJC A;  1NNW A;  2NXF A;  4JA9 A;  4UT3 A;  3H66 A;  1M63 A;  3N5U A;  1T71 A;  3JYF A;  3C5W C;  3GVE A;  2CV9 A;  1S95 A;  4MOV A;  2QFP A;  4H2F A;  4IL1 A;  3QFO A;  2Q8U A;  4H2B A;  4ZVZ A;  5EQV A;  5INB A;  4O43 A;  4H1Y P;  2O8A A;  4O4K A;  4OR9 A;  2WDE A;  2NPP C;  3E7A A;  1SU1 A;  2GJU A;  2NYL C;  4ORA A;  2HYO A;  1KBP A;  3RQZ A;  4DSY A;  1HO5 A;  3IVE A;  3IB7 A;  4NZV A;  5GTU A;  3DW8 C;  3IVD A;  4MOY A;  4B2O A;  3K7W C;  2HYP A;  3FGA C;  4O24 A;  3H60 A;  4M0V A;  3H67 A;  2BQ8 X;  3QG5 C;  4FBW A;  1OIE A;  3QFN A;  3P71 C;  1IT6 A;  1U32 A;  3HVQ A;  5HPE A;  2HY1 A;  2BDX A;  3QFK A;  3T1I A;  4I5L C;  1MF8 A;  4DHL A;  3EGH A;  2IE4 C;  4TUG A;  4LAC C;  1XZW A;  3PSN A;  4I5N C;  4TUI A;  1WAR A;  4O5G A;  3H61 A;  1WAO 1;  1XM7 A;  3H63 A;  5IOH A;  4KBP A;  3THN A;  1HPU A;  2JOG A;  1UTE A;  4LU9 A;  3KBP A;  4J6O A;  5F3W A;  1OID A;  1S3L A;  3H69 A;  2A22 A;  2KKN A;  3AUZ A;  4FBQ A;  3RL3 A;  4XPN A;  1TCO A;  4FCX A;  4HD0 A;  2NYM C;  4ZX2 A;  4Q7F A;  3CK2 A;  1QFC A;  2Z1A A;  1FJM A;  2R17 A;  4H1S A;  2Z06 A;  1S8E A;  1Z2W A;  1OI8 A;  1S3M A;  1UF3 A;  1G5B A;  2USH A;  3ICF A;  4UT2 A;  1HP1 A;  2WDC A;  4DT2 A;  5B8I A;  3C9F A;  4UT3 B;  5JPF A;  4FBK A;  4IYP C;  5JPE A;  4KKZ A;  4G9J A;  2P6B A;  2XMO A;  4LTY A;  2O8G A;  1II7 A;  3H64 A;  1S3N A;  3RL5 A;  4WWL A;  1JK7 A;  2BCD A;  3QFM A;  2Z72 A;  1T70 A;  1Z2X A;  5C1V A;  4H2I A;  2IAE C;  1V73 A;  2ZBM A;  3EGG A;  5J28 A;  4YKE A;  2YVT A;  2WDD A;  3ZTV A;  1W24 A;  3H68 A;  5JJT A;  3ZU0 A;  2QFR A;  3IB8 A;  3AV0 A;  5DNY A;  4MP0 A;  2IE3 C;  3RL4 A;  1S70 A;  3LL8 A;  3THO B;  3PSO A;  3DSD A;  1QHW A;  3DSC A;  1USH A;  4JA7 A;  4V0X A; 
#chains in the Genus database with same CATH topology
 3E7B A;  4H2G A;  4ORC A;  4V0V A;  2DFJ A;  3V4Y A;  2WDF A;  2AHD A;  4ORB A;  3TGH A;  1AUI A;  4V0W A;  3K7V C;  4F0Z A;  4UWQ A;  3H62 B;  2QJC A;  1NNW A;  2NXF A;  4JA9 A;  4UT3 A;  3H66 A;  1M63 A;  3N5U A;  1T71 A;  3JYF A;  3C5W C;  3GVE A;  2CV9 A;  1S95 A;  4MOV A;  2QFP A;  4H2F A;  4IL1 A;  3QFO A;  2Q8U A;  4H2B A;  4ZVZ A;  5EQV A;  5INB A;  4O43 A;  4H1Y P;  2O8A A;  4O4K A;  4OR9 A;  2WDE A;  2NPP C;  3E7A A;  1SU1 A;  2GJU A;  2NYL C;  4ORA A;  2DXN A;  2HYO A;  1KBP A;  3RQZ A;  4DSY A;  1HO5 A;  2YEQ A;  3IB7 A;  3IVE A;  4NZV A;  5GTU A;  3DW8 C;  3IVD A;  4MOY A;  4B2O A;  3K7W C;  2HYP A;  3FGA C;  4O24 A;  3H60 A;  4M0V A;  3H67 A;  2BQ8 X;  3QG5 C;  4FBW A;  1OIE A;  3QFN A;  3P71 C;  1IT6 A;  1U32 A;  3HVQ A;  5HPE A;  2HY1 A;  2BDX A;  3QFK A;  3T1I A;  4I5L C;  1MF8 A;  4DHL A;  3EGH A;  2IE4 C;  4TUG A;  4LAC C;  1XZW A;  3PSN A;  4I5N C;  4TUI A;  1WAR A;  4O5G A;  3H61 A;  1WAO 1;  1XM7 A;  3H63 A;  5IOH A;  4KBP A;  3THN A;  1HPU A;  2JOG A;  1UTE A;  4LU9 A;  3KBP A;  4J6O A;  5F3W A;  1OID A;  1S3L A;  3H69 A;  2A22 A;  2KKN A;  3AUZ A;  4FBQ A;  2ZOA A;  3RL3 A;  4XPN A;  1TCO A;  4FCX A;  4HD0 A;  2NYM C;  4ZX2 A;  4Q7F A;  3CK2 A;  1QFC A;  3FLO A;  2Z1A A;  1FJM A;  2R17 A;  4H1S A;  2Z06 A;  1S8E A;  1Z2W A;  1OI8 A;  1S3M A;  1UF3 A;  1G5B A;  2USH A;  3ICF A;  3E0J A;  1HP1 A;  2WDC A;  4UT2 A;  4DT2 A;  2ZO9 B;  5B8I A;  3C9F A;  4UT3 B;  5JPF A;  4FBK A;  4IYP C;  5JPE A;  4KKZ A;  4G9J A;  2P6B A;  2XMO A;  4LTY A;  2O8G A;  1II7 A;  3H64 A;  1S3N A;  3RL5 A;  4WWL A;  1JK7 A;  2BCD A;  3QFM A;  2Z72 A;  1T70 A;  1Z2X A;  5C1V A;  4H2I A;  2IAE C;  1V73 A;  2ZBM A;  3EGG A;  5J28 A;  4YKE A;  2YVT A;  2WDD A;  3ZTV A;  1W24 A;  3H68 A;  5JJT A;  3ZU0 A;  2QFR A;  3IB8 A;  3AV0 A;  3D03 A;  5DNY A;  4MP0 A;  2IE3 C;  3RL4 A;  1S70 A;  3LL8 A;  3THO B;  3PSO A;  3DSD A;  1QHW A;  3DSC A;  2DXL A;  1USH A;  4JA7 A;  4V0X A; 
#chains in the Genus database with same CATH homology
 3E7B A;  4H2G A;  4ORC A;  4V0V A;  2DFJ A;  3V4Y A;  2WDF A;  2AHD A;  4ORB A;  3TGH A;  1AUI A;  4V0W A;  3K7V C;  4F0Z A;  4UWQ A;  3H62 B;  2QJC A;  1NNW A;  2NXF A;  4JA9 A;  4UT3 A;  3H66 A;  1M63 A;  3N5U A;  1T71 A;  3JYF A;  3C5W C;  3GVE A;  2CV9 A;  1S95 A;  4MOV A;  2QFP A;  4H2F A;  4IL1 A;  3QFO A;  2Q8U A;  4H2B A;  4ZVZ A;  5EQV A;  5INB A;  4O43 A;  4H1Y P;  2O8A A;  4O4K A;  4OR9 A;  2WDE A;  2NPP C;  3E7A A;  1SU1 A;  2GJU A;  2NYL C;  4ORA A;  2DXN A;  2HYO A;  1KBP A;  3RQZ A;  4DSY A;  1HO5 A;  2YEQ A;  3IB7 A;  3IVE A;  4NZV A;  5GTU A;  3DW8 C;  3IVD A;  4MOY A;  4B2O A;  3K7W C;  2HYP A;  3FGA C;  4O24 A;  3H60 A;  4M0V A;  3H67 A;  2BQ8 X;  3QG5 C;  4FBW A;  1OIE A;  3QFN A;  3P71 C;  1IT6 A;  1U32 A;  3HVQ A;  5HPE A;  2HY1 A;  2BDX A;  3QFK A;  3T1I A;  4I5L C;  1MF8 A;  4DHL A;  3EGH A;  2IE4 C;  4TUG A;  4LAC C;  1XZW A;  3PSN A;  4I5N C;  4TUI A;  1WAR A;  4O5G A;  3H61 A;  1WAO 1;  1XM7 A;  3H63 A;  5IOH A;  4KBP A;  3THN A;  1HPU A;  2JOG A;  1UTE A;  4LU9 A;  3KBP A;  4J6O A;  5F3W A;  1OID A;  1S3L A;  3H69 A;  2A22 A;  2KKN A;  3AUZ A;  4FBQ A;  2ZOA A;  3RL3 A;  4XPN A;  1TCO A;  4FCX A;  4HD0 A;  2NYM C;  4ZX2 A;  4Q7F A;  3CK2 A;  1QFC A;  3FLO A;  2Z1A A;  1FJM A;  2R17 A;  4H1S A;  2Z06 A;  1S8E A;  1Z2W A;  1OI8 A;  1S3M A;  1UF3 A;  1G5B A;  2USH A;  3ICF A;  3E0J A;  1HP1 A;  2WDC A;  4UT2 A;  4DT2 A;  2ZO9 B;  5B8I A;  3C9F A;  4UT3 B;  5JPF A;  4FBK A;  4IYP C;  5JPE A;  4KKZ A;  4G9J A;  2P6B A;  2XMO A;  4LTY A;  2O8G A;  1II7 A;  3H64 A;  1S3N A;  3RL5 A;  4WWL A;  1JK7 A;  2BCD A;  3QFM A;  2Z72 A;  1T70 A;  1Z2X A;  5C1V A;  4H2I A;  2IAE C;  1V73 A;  2ZBM A;  3EGG A;  5J28 A;  4YKE A;  2YVT A;  2WDD A;  3ZTV A;  1W24 A;  3H68 A;  5JJT A;  3ZU0 A;  2QFR A;  3IB8 A;  3AV0 A;  3D03 A;  5DNY A;  4MP0 A;  2IE3 C;  3RL4 A;  1S70 A;  3LL8 A;  3THO B;  3PSO A;  3DSD A;  1QHW A;  3DSC A;  2DXL A;  1USH A;  4JA7 A;  4V0X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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