3IO9A

Biml12y in complex with mcl-1
Total Genus 57
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
57
sequence length
151
structure length
142
Chain Sequence
DDLYRQSLEIISRYLREQATGSGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Apoptosis
molecule keywords Induced myeloid leukemia cell differentiation protein Mcl-1
publication title Conformational changes in Bcl-2 pro-survival proteins determine their capacity to bind ligands.
pubmed doi rcsb
source organism Homo sapiens
total genus 57
structure length 142
sequence length 151
ec nomenclature
pdb deposition date 2009-08-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.437.10 Mainly Alpha Orthogonal Bundle Apoptosis Regulator Bcl-x Blc2-like 3io9A01
2B48A 4OQ6A 4QNQA 1PQ0A 2KUAA 3D7VA 4ZIIA 1R2GA 4B4SA 4ZBFA 1AF3A 2VOFA 5C3FA 2XPXA 5JSBA 3BL2A 4OQ5A 1BXLA 3KJ0A 2VOGA 2YV6A 1O0LA 5FC4A 1DDBA 1OHUA 4BD2A 1GJHA 3IIGA 3KJ2A 5FDOA 4S0OA 2O22A 2VOIA 2IMTA 2VOHA 1MK3A 4YK9A 3IHCA 1G5JA 4ZIGA 2VM6A 1G5MA 2PQKA 2O21A 4HW3A 3IHDA 4BD8A 2BIDA 5IEZA 1YSGA 5FDRA 3MK8A 2IMSA 4BPIA 3IIHA 4BD6A 2K7WA 1LXLA 1TY4A 2A5YA 2M5BA 4HW2A 2JM6B 2RODA 1R2DA 1YSIA 3I1HA 4HW4A 2W3LA 3KZ0A 4S0PA 4OYDA 1F16A 4ZEQA 4G35A 4U2VA 2WH6A 2XA0A 4ZBIA 1R2IA 4ZIEA 4ZIFA 3IO9A 1YSNA 1YSWA 2O2NA 1PQ1A 4BPJA 1R2EA 4BD7A 3ILCA 5C6HA 4U2UA 2NL9A 3KJ1A 3WIYA 4ZIHA 5KTGA 2V6QA 4WMRA 2ABOA 3QBRA 1WSXA 2LR1A 4YJ4A 5KU9A 3MQPA 2ME8A 4MI8A 1R2HA 4K5BC 1Q59A 2MHSA 4BDUA 3CVAX 2BZWA 3IHEA 1ZY3A 3WIXA 2O2FA 3DVUA 5FMIA 2MEJA 2O2MA 2JCNA 4QVXA 5IF4A 2KBWA 1K3KA 2NLAA 2ROCA 3PK1A 1MAZA
chains in the Genus database with same CATH superfamily
2B48A 4OQ6A 4QNQA 1PQ0A 2KUAA 3D7VA 4ZIIA 1R2GA 4B4SA 4ZBFA 1AF3A 2VOFA 5C3FA 2XPXA 2O42A 2VVWA 3JRVA 5JSBA 3BL2A 4OQ5A 4BBDA 1BXLA 4BBCA 3KJ0A 2VOGA 4UF3A 2YV6A 1O0LA 5FC4A 1DDBA 1OHUA 4BD2A 1GJHA 3IIGA 3KJ2A 5FDOA 4S0OA 2O22A 2JBXA 2VOIA 2IMTA 2VOHA 1MK3A 4YK9A 2VTYA 1G5JA 2UXEA 3IHCA 4ZIGA 2VM6A 1G5MA 2PQKA 2O21A 4HW3A 3IHDA 4BD8A 2BIDA 5IEZA 1YSGA 5FDRA 3MK8A 2IMSA 4BPIA 3IIHA 2VVXA 2JBYA 4BD6A 2K7WA 1LXLA 1TY4A 4LQKA 2A5YA 2M5BA 4HW2A 2JM6B 2RODA 1R2DA 1YSIA 3I1HA 4HW4A 2W3LA 3KZ0A 4S0PA 4OYDA 1F16A 2K36A 4ZEQA 4G35A 4U2VA 2WH6A 2XA0A 4ZBIA 1R2IA 4M0SA 4ZIEA 4ZIFA 3IO9A 1YSNA 1YSWA 2O2NA 1PQ1A 4BPJA 1R2EA 4BD7A 3ILCA 5C6HA 4U2UA 2NL9A 3KJ1A 3WIYA 4ZIHA 5KTGA 2V6QA 4WMRA 2ABOA 3QBRA 1WSXA 2LR1A 4YJ4A 5KU9A 4UF1A 3MQPA 4D2LA 4D2MA 2ME8A 4MI8A 1R2HA 4K5BC 1Q59A 2MHSA 2VVYA 4BDUA 3CVAX 2BZWA 3IHEA 1ZY3A 4UF2A 3WIXA 4BBBA 2I39A 2O2FA 3DVUA 5FMIA 2MEJA 2O2MA 2JCNA 4QVXA 5IF4A 2KBWA 1K3KA 2NLAA 2ROCA 3PK1A 1MAZA
chains in the Genus database with same CATH topology
2B48A 4OQ6A 4QNQA 1PQ0A 2KUAA 3D7VA 4ZIIA 1R2GA 4B4SA 4ZBFA 1AF3A 2VOFA 5C3FA 2XPXA 5JSBA 3BL2A 4OQ5A 1BXLA 3KJ0A 2VOGA 2YV6A 1O0LA 5FC4A 1DDBA 1OHUA 4BD2A 1GJHA 3IIGA 3KJ2A 5FDOA 4S0OA 2O22A 2VOIA 2IMTA 2VOHA 1MK3A 4YK9A 3IHCA 1G5JA 4ZIGA 2VM6A 1G5MA 2PQKA 2O21A 4HW3A 3IHDA 4BD8A 2BIDA 5IEZA 1YSGA 5FDRA 3MK8A 2IMSA 4BPIA 3IIHA 4BD6A 2K7WA 1LXLA 1TY4A 2A5YA 2M5BA 4HW2A 2JM6B 2RODA 1R2DA 1YSIA 3I1HA 4HW4A 2W3LA 3KZ0A 4S0PA 4OYDA 1F16A 4ZEQA 4G35A 4U2VA 2WH6A 2XA0A 4ZBIA 1R2IA 4ZIEA 4ZIFA 3IO9A 1YSNA 1YSWA 2O2NA 1PQ1A 4BPJA 1R2EA 4BD7A 3ILCA 5C6HA 4U2UA 2NL9A 3KJ1A 3WIYA 4ZIHA 5KTGA 2V6QA 4WMRA 2ABOA 3QBRA 1WSXA 2LR1A 4YJ4A 5KU9A 3MQPA 2ME8A 4MI8A 1R2HA 4K5BC 1Q59A 2MHSA 4BDUA 3CVAX 2BZWA 3IHEA 1ZY3A 3WIXA 2O2FA 3DVUA 5FMIA 2MEJA 2O2MA 2JCNA 4QVXA 5IF4A 2KBWA 1K3KA 2NLAA 2ROCA 3PK1A 1MAZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B48 A;  4OQ6 A;  4QNQ A;  1PQ0 A;  2KUA A;  3D7V A;  4ZII A;  1R2G A;  4B4S A;  4ZBF A;  1AF3 A;  2VOF A;  5C3F A;  2XPX A;  5JSB A;  3BL2 A;  4OQ5 A;  1BXL A;  3KJ0 A;  2VOG A;  2YV6 A;  1O0L A;  5FC4 A;  1DDB A;  1OHU A;  4BD2 A;  1GJH A;  3IIG A;  3KJ2 A;  5FDO A;  4S0O A;  2O22 A;  2VOI A;  2IMT A;  2VOH A;  1MK3 A;  4YK9 A;  3IHC A;  1G5J A;  4ZIG A;  2VM6 A;  1G5M A;  2PQK A;  2O21 A;  4HW3 A;  3IHD A;  4BD8 A;  2BID A;  5IEZ A;  1YSG A;  5FDR A;  3MK8 A;  2IMS A;  4BPI A;  3IIH A;  4BD6 A;  2K7W A;  1LXL A;  1TY4 A;  2A5Y A;  2M5B A;  4HW2 A;  2JM6 B;  2ROD A;  1R2D A;  1YSI A;  3I1H A;  4HW4 A;  2W3L A;  3KZ0 A;  4S0P A;  4OYD A;  1F16 A;  4ZEQ A;  4G35 A;  4U2V A;  2WH6 A;  2XA0 A;  4ZBI A;  1R2I A;  4ZIE A;  4ZIF A;  3IO9 A;  1YSN A;  1YSW A;  2O2N A;  1PQ1 A;  4BPJ A;  1R2E A;  4BD7 A;  3ILC A;  5C6H A;  4U2U A;  2NL9 A;  3KJ1 A;  3WIY A;  4ZIH A;  5KTG A;  2V6Q A;  4WMR A;  2ABO A;  3QBR A;  1WSX A;  2LR1 A;  4YJ4 A;  5KU9 A;  3MQP A;  2ME8 A;  4MI8 A;  1R2H A;  4K5B C;  1Q59 A;  2MHS A;  4BDU A;  3CVA X;  2BZW A;  3IHE A;  1ZY3 A;  3WIX A;  2O2F A;  3DVU A;  5FMI A;  2MEJ A;  2O2M A;  2JCN A;  4QVX A;  5IF4 A;  2KBW A;  1K3K A;  2NLA A;  2ROC A;  3PK1 A;  1MAZ A; 
#chains in the Genus database with same CATH topology
 2B48 A;  4OQ6 A;  4QNQ A;  1PQ0 A;  2KUA A;  3D7V A;  4ZII A;  1R2G A;  4B4S A;  4ZBF A;  1AF3 A;  2VOF A;  5C3F A;  2XPX A;  2O42 A;  2VVW A;  3JRV A;  5JSB A;  3BL2 A;  4OQ5 A;  4BBD A;  1BXL A;  4BBC A;  3KJ0 A;  2VOG A;  4UF3 A;  2YV6 A;  1O0L A;  5FC4 A;  1DDB A;  1OHU A;  4BD2 A;  1GJH A;  3IIG A;  3KJ2 A;  5FDO A;  4S0O A;  2O22 A;  2JBX A;  2VOI A;  2IMT A;  2VOH A;  1MK3 A;  4YK9 A;  2VTY A;  1G5J A;  2UXE A;  3IHC A;  4ZIG A;  2VM6 A;  1G5M A;  2PQK A;  2O21 A;  4HW3 A;  3IHD A;  4BD8 A;  2BID A;  5IEZ A;  1YSG A;  5FDR A;  3MK8 A;  2IMS A;  4BPI A;  3IIH A;  2VVX A;  2JBY A;  4BD6 A;  2K7W A;  1LXL A;  1TY4 A;  4LQK A;  2A5Y A;  2M5B A;  4HW2 A;  2JM6 B;  2ROD A;  1R2D A;  1YSI A;  3I1H A;  4HW4 A;  2W3L A;  3KZ0 A;  4S0P A;  4OYD A;  1F16 A;  2K36 A;  4ZEQ A;  4G35 A;  4U2V A;  2WH6 A;  2XA0 A;  4ZBI A;  1R2I A;  4M0S A;  4ZIE A;  4ZIF A;  3IO9 A;  1YSN A;  1YSW A;  2O2N A;  1PQ1 A;  4BPJ A;  1R2E A;  4BD7 A;  3ILC A;  5C6H A;  4U2U A;  2NL9 A;  3KJ1 A;  3WIY A;  4ZIH A;  5KTG A;  2V6Q A;  4WMR A;  2ABO A;  3QBR A;  1WSX A;  2LR1 A;  4YJ4 A;  5KU9 A;  4UF1 A;  3MQP A;  4D2L A;  4D2M A;  2ME8 A;  4MI8 A;  1R2H A;  4K5B C;  1Q59 A;  2MHS A;  2VVY A;  4BDU A;  3CVA X;  2BZW A;  3IHE A;  1ZY3 A;  4UF2 A;  3WIX A;  4BBB A;  2I39 A;  2O2F A;  3DVU A;  5FMI A;  2MEJ A;  2O2M A;  2JCN A;  4QVX A;  5IF4 A;  2KBW A;  1K3K A;  2NLA A;  2ROC A;  3PK1 A;  1MAZ A; 
#chains in the Genus database with same CATH homology
 2B48 A;  4OQ6 A;  4QNQ A;  1PQ0 A;  2KUA A;  3D7V A;  4ZII A;  1R2G A;  4B4S A;  4ZBF A;  1AF3 A;  2VOF A;  5C3F A;  2XPX A;  5JSB A;  3BL2 A;  4OQ5 A;  1BXL A;  3KJ0 A;  2VOG A;  2YV6 A;  1O0L A;  5FC4 A;  1DDB A;  1OHU A;  4BD2 A;  1GJH A;  3IIG A;  3KJ2 A;  5FDO A;  4S0O A;  2O22 A;  2VOI A;  2IMT A;  2VOH A;  1MK3 A;  4YK9 A;  3IHC A;  1G5J A;  4ZIG A;  2VM6 A;  1G5M A;  2PQK A;  2O21 A;  4HW3 A;  3IHD A;  4BD8 A;  2BID A;  5IEZ A;  1YSG A;  5FDR A;  3MK8 A;  2IMS A;  4BPI A;  3IIH A;  4BD6 A;  2K7W A;  1LXL A;  1TY4 A;  2A5Y A;  2M5B A;  4HW2 A;  2JM6 B;  2ROD A;  1R2D A;  1YSI A;  3I1H A;  4HW4 A;  2W3L A;  3KZ0 A;  4S0P A;  4OYD A;  1F16 A;  4ZEQ A;  4G35 A;  4U2V A;  2WH6 A;  2XA0 A;  4ZBI A;  1R2I A;  4ZIE A;  4ZIF A;  3IO9 A;  1YSN A;  1YSW A;  2O2N A;  1PQ1 A;  4BPJ A;  1R2E A;  4BD7 A;  3ILC A;  5C6H A;  4U2U A;  2NL9 A;  3KJ1 A;  3WIY A;  4ZIH A;  5KTG A;  2V6Q A;  4WMR A;  2ABO A;  3QBR A;  1WSX A;  2LR1 A;  4YJ4 A;  5KU9 A;  3MQP A;  2ME8 A;  4MI8 A;  1R2H A;  4K5B C;  1Q59 A;  2MHS A;  4BDU A;  3CVA X;  2BZW A;  3IHE A;  1ZY3 A;  3WIX A;  2O2F A;  3DVU A;  5FMI A;  2MEJ A;  2O2M A;  2JCN A;  4QVX A;  5IF4 A;  2KBW A;  1K3K A;  2NLA A;  2ROC A;  3PK1 A;  1MAZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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