3ISSA

Crystal structure of enolpyruvyl-udp-glcnac synthase (mura):udp-n-acetylmuramic acid:phosphite from escherichia coli
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
418
structure length
418
Chain Sequence
MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQLGAKVERDGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIERVKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords UDP-N-acetylglucosamine 1-carboxyvinyltransferase
publication title Evidence of Kinetic Control of Ligand Binding and Staged Product Release in MurA (Enolpyruvyl UDP-GlcNAc Synthase)-Catalyzed Reactions .
pubmed doi rcsb
source organism Escherichia coli k-12
total genus 137
structure length 418
sequence length 418
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.5.1.7: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
pdb deposition date 2009-08-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3issA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 3issA01
3VCYA 5BUFA 2PQ9A 3SWEA 4E7GA 2O0DA 3LTHA 4ZNDA 2GG4A 3V5VA 2QFQA 2O0XA 3RMTA 1MI4A 4FQDA 4N3PA 3TR1A 2AAYA 3FK0A 1DLGA 2GG6A 1EJDA 1EYNA 1G6SA 4E7CA 3SWQA 1EJCA 2GGDA 2O0BA 3FK1A 2RL1A 5U4HA 3NVSA 1UAEA 3KQJA 1P88A 2O0ZA 1X8RA 1RF6A 1P89A 3UPKA 1G6TA 2PQDA 3FJZA 4E7FA 3KQAA 1NAWA 2GGAA 4EGRA 3TI2A 3SG1A 1RYWA 1Q36A 3V4TA 2YVWA 3ZH4A 2AA9A 2RL2A 5BS5A 2PQBA 1YBGA 2BJBA 3SWGA 4EIIA 4E7BA 1RF5A 1A2NA 3ISSA 3FJXA 3SWDA 2Z2CA 5BQ2A 3KR6A 2QFSA 2O0EA 4E7EA 3SPBA 2PQCA 4GFPA 1X8TA 3SWAA 2QFUA 3R38A 3ZH3A 4R7UA 3SWIA 3ROIA 2QFTA 3SU9A 3SLHA 1Q3GA 1RF4A 4E7DA 2O15A
chains in the Genus database with same CATH superfamily
3VCYA 5BUFA 2PQ9A 3SWEA 4E7GA 2O0DA 3LTHA 4ZNDA 2GG4A 3V5VA 2QFQA 2O0XA 3RMTA 1MI4A 4FQDA 4N3PA 3TR1A 3TUXA 2AAYA 3FK0A 1DLGA 2GG6A 1EJDA 1EYNA 1G6SA 4E7CA 3SWQA 1EJCA 2GGDA 2O0BA 3FK1A 2RL1A 3TV1A 5U4HA 3KGDA 3NVSA 1UAEA 3KQJA 4O8JA 1P88A 2O0ZA 1X8RA 1RF6A 1P89A 3UPKA 3TW3A 1G6TA 2PQDA 3FJZA 4E7FA 1QMHA 3KQAA 1NAWA 2GGAA 4EGRA 4CLQA 3TI2A 1QMIA 3SG1A 1RYWA 1Q36A 3V4TA 2YVWA 3ZH4A 2AA9A 2RL2A 5BS5A 2PQBA 1YBGA 2BJBA 3SWGA 4EIIA 4E7BA 1RF5A 1A2NA 3ISSA 3FJXA 3SWDA 2Z2CA 5BQ2A 3KR6A 2QFSA 2O0EA 4E7EA 3SPBA 2PQCA 4GFPA 1X8TA 3SWAA 2QFUA 3PQVA 3R38A 3ZH3A 3TUTA 4R7UA 3SWIA 3ROIA 2QFTA 3SU9A 3SLHA 1Q3GA 1RF4A 4O89A 4E7DA 2O15A
chains in the Genus database with same CATH topology
3VCYA 5BUFA 2PQ9A 3SWEA 4E7GA 2O0DA 3LTHA 4ZNDA 2GG4A 3V5VA 2QFQA 2O0XA 3RMTA 1MI4A 4FQDA 4N3PA 3TR1A 2AAYA 3FK0A 1DLGA 2GG6A 1EJDA 1EYNA 1G6SA 4E7CA 3SWQA 1EJCA 2GGDA 2O0BA 3FK1A 2RL1A 5U4HA 3NVSA 1UAEA 3KQJA 1P88A 2O0ZA 1X8RA 1RF6A 1P89A 3UPKA 1G6TA 2PQDA 3FJZA 4E7FA 3KQAA 1NAWA 2GGAA 4EGRA 3TI2A 3SG1A 1RYWA 1Q36A 3V4TA 2YVWA 3ZH4A 2AA9A 2RL2A 5BS5A 2PQBA 1YBGA 2BJBA 3SWGA 4EIIA 4E7BA 1RF5A 1A2NA 3ISSA 3FJXA 3SWDA 2Z2CA 5BQ2A 3KR6A 2QFSA 2O0EA 4E7EA 3SPBA 2PQCA 4GFPA 1X8TA 3SWAA 2QFUA 3R38A 3ZH3A 4R7UA 3SWIA 3ROIA 2QFTA 3SU9A 3SLHA 1Q3GA 1RF4A 4E7DA 2O15A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3VCY A;  5BUF A;  2PQ9 A;  3SWE A;  4E7G A;  2O0D A;  3LTH A;  4ZND A;  2GG4 A;  3V5V A;  2QFQ A;  2O0X A;  3RMT A;  1MI4 A;  4FQD A;  4N3P A;  3TR1 A;  2AAY A;  3FK0 A;  1DLG A;  2GG6 A;  1EJD A;  1EYN A;  1G6S A;  4E7C A;  3SWQ A;  1EJC A;  2GGD A;  2O0B A;  3FK1 A;  2RL1 A;  5U4H A;  3NVS A;  1UAE A;  3KQJ A;  1P88 A;  2O0Z A;  1X8R A;  1RF6 A;  1P89 A;  3UPK A;  1G6T A;  2PQD A;  3FJZ A;  4E7F A;  3KQA A;  1NAW A;  2GGA A;  4EGR A;  3TI2 A;  3SG1 A;  1RYW A;  1Q36 A;  3V4T A;  2YVW A;  3ZH4 A;  2AA9 A;  2RL2 A;  5BS5 A;  2PQB A;  1YBG A;  2BJB A;  3SWG A;  4EII A;  4E7B A;  1RF5 A;  1A2N A;  3ISS A;  3FJX A;  3SWD A;  2Z2C A;  5BQ2 A;  3KR6 A;  2QFS A;  2O0E A;  4E7E A;  3SPB A;  2PQC A;  4GFP A;  1X8T A;  3SWA A;  2QFU A;  3R38 A;  3ZH3 A;  4R7U A;  3SWI A;  3ROI A;  2QFT A;  3SU9 A;  3SLH A;  1Q3G A;  1RF4 A;  4E7D A;  2O15 A; 
#chains in the Genus database with same CATH topology
 3VCY A;  5BUF A;  2PQ9 A;  3SWE A;  4E7G A;  2O0D A;  3LTH A;  4ZND A;  2GG4 A;  3V5V A;  2QFQ A;  2O0X A;  3RMT A;  1MI4 A;  4FQD A;  4N3P A;  3TR1 A;  3TUX A;  2AAY A;  3FK0 A;  1DLG A;  2GG6 A;  1EJD A;  1EYN A;  1G6S A;  4E7C A;  3SWQ A;  1EJC A;  2GGD A;  2O0B A;  3FK1 A;  2RL1 A;  3TV1 A;  5U4H A;  3KGD A;  3NVS A;  1UAE A;  3KQJ A;  4O8J A;  1P88 A;  2O0Z A;  1X8R A;  1RF6 A;  1P89 A;  3UPK A;  3TW3 A;  1G6T A;  2PQD A;  3FJZ A;  4E7F A;  1QMH A;  3KQA A;  1NAW A;  2GGA A;  4EGR A;  4CLQ A;  3TI2 A;  1QMI A;  3SG1 A;  1RYW A;  1Q36 A;  3V4T A;  2YVW A;  3ZH4 A;  2AA9 A;  2RL2 A;  5BS5 A;  2PQB A;  1YBG A;  2BJB A;  3SWG A;  4EII A;  4E7B A;  1RF5 A;  1A2N A;  3ISS A;  3FJX A;  3SWD A;  2Z2C A;  5BQ2 A;  3KR6 A;  2QFS A;  2O0E A;  4E7E A;  3SPB A;  2PQC A;  4GFP A;  1X8T A;  3SWA A;  2QFU A;  3PQV A;  3R38 A;  3ZH3 A;  3TUT A;  4R7U A;  3SWI A;  3ROI A;  2QFT A;  3SU9 A;  3SLH A;  1Q3G A;  1RF4 A;  4O89 A;  4E7D A;  2O15 A; 
#chains in the Genus database with same CATH homology
 3VCY A;  5BUF A;  2PQ9 A;  3SWE A;  4E7G A;  2O0D A;  3LTH A;  4ZND A;  2GG4 A;  3V5V A;  2QFQ A;  2O0X A;  3RMT A;  1MI4 A;  4FQD A;  4N3P A;  3TR1 A;  2AAY A;  3FK0 A;  1DLG A;  2GG6 A;  1EJD A;  1EYN A;  1G6S A;  4E7C A;  3SWQ A;  1EJC A;  2GGD A;  2O0B A;  3FK1 A;  2RL1 A;  5U4H A;  3NVS A;  1UAE A;  3KQJ A;  1P88 A;  2O0Z A;  1X8R A;  1RF6 A;  1P89 A;  3UPK A;  1G6T A;  2PQD A;  3FJZ A;  4E7F A;  3KQA A;  1NAW A;  2GGA A;  4EGR A;  3TI2 A;  3SG1 A;  1RYW A;  1Q36 A;  3V4T A;  2YVW A;  3ZH4 A;  2AA9 A;  2RL2 A;  5BS5 A;  2PQB A;  1YBG A;  2BJB A;  3SWG A;  4EII A;  4E7B A;  1RF5 A;  1A2N A;  3ISS A;  3FJX A;  3SWD A;  2Z2C A;  5BQ2 A;  3KR6 A;  2QFS A;  2O0E A;  4E7E A;  3SPB A;  2PQC A;  4GFP A;  1X8T A;  3SWA A;  2QFU A;  3R38 A;  3ZH3 A;  4R7U A;  3SWI A;  3ROI A;  2QFT A;  3SU9 A;  3SLH A;  1Q3G A;  1RF4 A;  4E7D A;  2O15 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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