3K6AA

Crystal structure of molybdenum cofactor biosynthesis protein mog from shewanella oneidensis
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
176
structure length
176
Chain Sequence
AMSKAKIGIVTVSDRASAGIYEDISGKAIIDTLNDYLTSEWEPIYQVIPDEQDVIETTLIKMADEQDCCLIVTTGGTGPAKRDVTPEATEAVCDRMMPGFGELMRAESLKFVPTAILSRQTAGLRGDSLIVNLPGKPKSIRECLDAVFPAIPYCIDLMEGPYLECNEAVIKPFRPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords Molybdenum cofactor biosynthesis protein Mog
publication title Crystal Structure of Molybdenum Cofactor Biosynthesis Protein Mog from Shewanella Oneidensis
rcsb
source organism Shewanella oneidensis
total genus 49
structure length 176
sequence length 176
chains with identical sequence B, C, D, E, F
ec nomenclature
pdb deposition date 2009-10-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 3k6aA00
4TK1A 2NQVA 4TWGA 2NRPA 3MCHA 5ERVA 5G2RA 4CT8A 1O8NA 2FU3A 2G4RA 1G8LA 4UOCA 3TCRA 4CTAA 1Y5EA 1MKZA 1FC5A 2NQSA 1JLJA 3PZYA 3MCJA 4PD1A 1O8QA 1UUYA 5ERQA 2NQMA 4U90A 2NQUA 3MCIA 1DI6A 2PBQA 1UUXA 1XI8A 5ERTA 3KBQA 5ERSA 2NQRA 4NWOA 4TK3A 4CTAB 1UZ5A 2NRSA 4UUWA 2NQQA 4CT9A 1G8RA 2F7YA 4XCWA 3OI9A 3RFQA 4U91A 2IS8A 1EAVA 2F7WA 2QQ1A 5G2SA 4UUXA 1O8OA 4TK4A 4LHBA 3K6AA 2FTSA 1WU2A 5ERUA 2NROA 5ERRA 1DI7A 2NQNA 2NQKA 1T3EA 1R2KA 2G2CA 4PD0A 3IWTA 1IHCA
chains in the Genus database with same CATH superfamily
5ERVA 1O8NA 4CTAA 1G8LA 1FC5A 3DQQA 4PD1A 1O8QA 4U90A 2NQUA 1DI6A 4CTAB 2NRSA 3OI9A 2IS8A 2F7WA 4TK4A 3K6AA 1T3EA 4TWGA 4TK1A 2NRPA 4UOCA 1Y5EA 3MCJA 3MCIA 1XI8A 3KBQA 4XCWA 4U91A 5G2SA 5ERUA 5ERRA 2NQNA 3IWTA 1IHCA 5G2RA 2G4RA 1MKZA 2NQSA 1JLJA 5ERQA 1UUXA 5ERTA 5ERSA 2NQRA 4TK3A 4UUWA 4CT9A 1G8RA 3RFQA 4UUXA 1O8OA 2FTSA 2NROA 1R2KA 2G2CA 2NQQA 2NQVA 3MCHA 4CT8A 2FU3A 3TCRA 3PZYA 1UUYA 5DMHA 2NQMA 2PBQA 4NWOA 1UZ5A 2F7YA 1EAVA 2QQ1A 4LHBA 1WU2A 1DI7A 2NQKA 1YZYA 4PD0A
chains in the Genus database with same CATH topology
4TK1A 2NQVA 4TWGA 2NRPA 3MCHA 5ERVA 5G2RA 4CT8A 1O8NA 2FU3A 2G4RA 1G8LA 4UOCA 3TCRA 4CTAA 1Y5EA 1MKZA 1FC5A 2NQSA 1JLJA 3PZYA 3MCJA 4PD1A 1O8QA 1UUYA 5ERQA 2NQMA 4U90A 2NQUA 3MCIA 1DI6A 2PBQA 1UUXA 1XI8A 5ERTA 3KBQA 5ERSA 2NQRA 4NWOA 4TK3A 4CTAB 1UZ5A 2NRSA 4UUWA 2NQQA 4CT9A 1G8RA 2F7YA 4XCWA 3OI9A 3RFQA 4U91A 2IS8A 1EAVA 2F7WA 2QQ1A 5G2SA 4UUXA 1O8OA 4TK4A 4LHBA 3K6AA 2FTSA 1WU2A 5ERUA 2NROA 5ERRA 1DI7A 2NQNA 2NQKA 1T3EA 1R2KA 2G2CA 4PD0A 3IWTA 1IHCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4TK1 A;  2NQV A;  4TWG A;  2NRP A;  3MCH A;  5ERV A;  5G2R A;  4CT8 A;  1O8N A;  2FU3 A;  2G4R A;  1G8L A;  4UOC A;  3TCR A;  4CTA A;  1Y5E A;  1MKZ A;  1FC5 A;  2NQS A;  1JLJ A;  3PZY A;  3MCJ A;  4PD1 A;  1O8Q A;  1UUY A;  5ERQ A;  2NQM A;  4U90 A;  2NQU A;  3MCI A;  1DI6 A;  2PBQ A;  1UUX A;  1XI8 A;  5ERT A;  3KBQ A;  5ERS A;  2NQR A;  4NWO A;  4TK3 A;  4CTA B;  1UZ5 A;  2NRS A;  4UUW A;  2NQQ A;  4CT9 A;  1G8R A;  2F7Y A;  4XCW A;  3OI9 A;  3RFQ A;  4U91 A;  2IS8 A;  1EAV A;  2F7W A;  2QQ1 A;  5G2S A;  4UUX A;  1O8O A;  4TK4 A;  4LHB A;  3K6A A;  2FTS A;  1WU2 A;  5ERU A;  2NRO A;  5ERR A;  1DI7 A;  2NQN A;  2NQK A;  1T3E A;  1R2K A;  2G2C A;  4PD0 A;  3IWT A;  1IHC A; 
#chains in the Genus database with same CATH topology
 5ERV A;  1O8N A;  4CTA A;  1G8L A;  1FC5 A;  3DQQ A;  4PD1 A;  1O8Q A;  4U90 A;  2NQU A;  1DI6 A;  4CTA B;  2NRS A;  3OI9 A;  2IS8 A;  2F7W A;  4TK4 A;  3K6A A;  1T3E A;  4TWG A;  4TK1 A;  2NRP A;  4UOC A;  1Y5E A;  3MCJ A;  3MCI A;  1XI8 A;  3KBQ A;  4XCW A;  4U91 A;  5G2S A;  5ERU A;  5ERR A;  2NQN A;  3IWT A;  1IHC A;  5G2R A;  2G4R A;  1MKZ A;  2NQS A;  1JLJ A;  5ERQ A;  1UUX A;  5ERT A;  5ERS A;  2NQR A;  4TK3 A;  4UUW A;  4CT9 A;  1G8R A;  3RFQ A;  4UUX A;  1O8O A;  2FTS A;  2NRO A;  1R2K A;  2G2C A;  2NQQ A;  2NQV A;  3MCH A;  4CT8 A;  2FU3 A;  3TCR A;  3PZY A;  1UUY A;  5DMH A;  2NQM A;  2PBQ A;  4NWO A;  1UZ5 A;  2F7Y A;  1EAV A;  2QQ1 A;  4LHB A;  1WU2 A;  1DI7 A;  2NQK A;  1YZY A;  4PD0 A; 
#chains in the Genus database with same CATH homology
 4TK1 A;  2NQV A;  4TWG A;  2NRP A;  3MCH A;  5ERV A;  5G2R A;  4CT8 A;  1O8N A;  2FU3 A;  2G4R A;  1G8L A;  4UOC A;  3TCR A;  4CTA A;  1Y5E A;  1MKZ A;  1FC5 A;  2NQS A;  1JLJ A;  3PZY A;  3MCJ A;  4PD1 A;  1O8Q A;  1UUY A;  5ERQ A;  2NQM A;  4U90 A;  2NQU A;  3MCI A;  1DI6 A;  2PBQ A;  1UUX A;  1XI8 A;  5ERT A;  3KBQ A;  5ERS A;  2NQR A;  4NWO A;  4TK3 A;  4CTA B;  1UZ5 A;  2NRS A;  4UUW A;  2NQQ A;  4CT9 A;  1G8R A;  2F7Y A;  4XCW A;  3OI9 A;  3RFQ A;  4U91 A;  2IS8 A;  1EAV A;  2F7W A;  2QQ1 A;  5G2S A;  4UUX A;  1O8O A;  4TK4 A;  4LHB A;  3K6A A;  2FTS A;  1WU2 A;  5ERU A;  2NRO A;  5ERR A;  1DI7 A;  2NQN A;  2NQK A;  1T3E A;  1R2K A;  2G2C A;  4PD0 A;  3IWT A;  1IHC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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