The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
40
|
sequence length |
164
|
structure length |
164
|
Chain Sequence |
FETVASFDFRDALSKASTPVTVVATNGPFGLAGLTCSAVCSVCDRPPTVLLCINRKSYAAGIIKSNGVLSVNWLAAGQAVISQTFAGVGSVPMEERFADKGWQTIATGAPYRMDAAVSFDCTIANIVDVGSHSVIFAEVVARNHAEECTPLIYHRRQYATTRSL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Characterization of chlorophenol 4-monooxygenase (TftD) and NADH:FAD oxidoreductase (TftC) of Burkholderia cepacia AC1100.
pubmed doi rcsb |
| molecule tags |
Oxidoreductase
|
| source organism |
Burkholderia cepacia
|
| molecule keywords |
Chlorophenol-4-monooxygenase component 1
|
| total genus |
40
|
| structure length |
164
|
| sequence length |
164
|
| chains with identical sequence |
B
|
| ec nomenclature |
ec
1.5.1.37: FAD reductase (NADH). |
| pdb deposition date | 2009-10-13 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF01613 | Flavin_Reduct | Flavin reductase like domain |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Roll | Pnp Oxidase; Chain A | Electron Transport, Fmn-binding Protein; Chain A |
#chains in the Genus database with same CATH superfamily 3FKH A; 1YOA A; 3HMZ A; 2D36 A; 1RFE A; 3ZOD A; 1WLI A; 3SWJ A; 4XHY A; 4HMV A; 4Y9I A; 1USC A; 3BNK A; 4HMX A; 4N7R C; 1RZ0 A; 1T9M A; 3R5Z A; 4HMU A; 3R5L A; 3ZOF A; 2ECR A; 2HQ9 A; 2X1K A; 2QCK A; 1G78 A; 4Z85 A; 2PTF A; 1WLK A; 1G77 A; 2FG9 A; 1YLN A; 2I02 A; 3CP3 A; 3DNH A; 2E83 A; 2QEA A; 3B5M A; 5CHO A; 1NRG A; 4YWN A; 2HHZ A; 1W3R A; 3NFW A; 2ARZ A; 4L82 A; 3CB0 A; 3H96 A; 2D38 A; 3K88 A; 1TY9 A; 3DMB A; 5JAB A; 2AQ6 A; 2IML A; 3IN6 A; 3A20 A; 1Y30 A; 1USF A; 1EJE A; 2FHQ A; 2D37 A; 2NR4 A; 5ESC A; 1G79 A; 1W9A A; 2IG6 A; 2RDE A; 3U0I A; 2ASF A; 4IRA A; 3ZOH A; 2D5M A; 3F7E A; 1WGB A; 1G76 A; 3EC6 A; 1FLM A; 2RE7 A; 5BNC A; 1JNW A; 3FGE A; 3DB0 A; 2VPA A; 3R5Y A; 3TGV A; 3VYA A; 2FUR A; 2IAB A; 1AXJ A; 4F07 A; 4HMT A; 2GJG A; 3R5W A; 2OU5 A; 3HY8 A; 1XHN A; 2X1J A; 3A6Q A; 4HX6 A; 4R82 A; 3E4V A; 3ZOC A; 1CI0 A; 3GAS A; 1W3Q A; 3KYF A; 1XXO A; 2ED4 A; 4HMS A; 3KYG A; 2R6V A; 1W3P A; 3U5W A; 2Q9K A; 2HQ7 A; 1VL7 A; 3VY5 A; 2I51 A; 3R5R A; 1RZ1 A; 3ZOE A; 3U35 A; 3K87 A; 3R5P A; 4QVB A; 3VY2 A; 3ZOG A; 2ECU A; 4ZKY A; 3BPK A; 2A2J A; 3BA3 A; 3PFT A; 4HMW A; 4YBN A; 3U34 A; 1I0S A; 1I0R A; 1DNL A; 2HTI A; 2OL5 A; 3K86 A; 2R0X A; 3RH7 A; 1W3O A; 3AWH A; 2HTD A; 4XJ2 A; 5CHE C; 3A6R A; 3AMF A; 1WV4 A; #chains in the Genus database with same CATH topology 3FKH A; 2K4Q A; 1YOA A; 3HMZ A; 2D36 A; 1RFE A; 3ZOD A; 1WLI A; 3SWJ A; 4XHY A; 4HMV A; 4Y9I A; 1USC A; 3BNK A; 4HMX A; 4N7R C; 1RZ0 A; 1T9M A; 3R5Z A; 4HMU A; 3R5L A; 3ZOF A; 2ECR A; 2HQ9 A; 2X1K A; 2QCK A; 1G78 A; 4Z85 A; 2PTF A; 1WLK A; 1G77 A; 2FG9 A; 1YLN A; 2I02 A; 3CP3 A; 3DNH A; 2E83 A; 2QEA A; 3EAA A; 3B5M A; 3V4H A; 5CHO A; 1NRG A; 4YWN A; 2HHZ A; 1W3R A; 3NFW A; 2ARZ A; 4L82 A; 3CB0 A; 3H96 A; 2D38 A; 3K88 A; 1TY9 A; 3DMB A; 4W64 A; 5JAB A; 2AQ6 A; 2IML A; 3IN6 A; 3A20 A; 1Y30 A; 2GUJ A; 4HKH A; 1USF A; 1EJE A; 2FHQ A; 2D37 A; 2NR4 A; 5ESC A; 1G79 A; 1W9A A; 2IG6 A; 2RDE A; 3U0I A; 2ASF A; 4IRA A; 3ZOH A; 2D5M A; 3F7E A; 1WGB A; 1G76 A; 3EC6 A; 1FLM A; 2RE7 A; 5BNC A; 1JNW A; 3FGE A; 3DB0 A; 2VPA A; 3R5Y A; 3TGV A; 3VYA A; 2FUR A; 2IAB A; 1AXJ A; 4F07 A; 4HMT A; 2GJG A; 3R5W A; 2P5Z X; 2OU5 A; 3HY8 A; 1XHN A; 2X1J A; 3A6Q A; 4HX6 A; 4R82 A; 3E4V A; 3ZOC A; 1CI0 A; 3GAS A; 1W3Q A; 3KYF A; 1XXO A; 2ED4 A; 4HMS A; 3KYG A; 4UHV A; 2R6V A; 4TV4 A; 1W3P A; 3U5W A; 2Q9K A; 2HQ7 A; 1VL7 A; 3VY5 A; 2I51 A; 3R5R A; 1RZ1 A; 3ZOE A; 3U35 A; 3K87 A; 3R5P A; 4QVB A; 3VY2 A; 3ZOG A; 4MTK A; 2ECU A; 3HE1 A; 4ZKY A; 3BPK A; 2A2J A; 1Y12 A; 3BA3 A; 3PFT A; 4HMW A; 4YBN A; 1I0S A; 1I0R A; 3U34 A; 1DNL A; 2HTI A; 2OL5 A; 3K86 A; 2R0X A; 3RH7 A; 1W3O A; 3AWH A; 2HTD A; 4XJ2 A; 5CHE C; 3A6R A; 2L1T A; 3AMF A; 1WV4 A; #chains in the Genus database with same CATH homology 3FKH A; 1YOA A; 3HMZ A; 2D36 A; 1RFE A; 3ZOD A; 1WLI A; 3SWJ A; 4XHY A; 4HMV A; 4Y9I A; 1USC A; 3BNK A; 4HMX A; 4N7R C; 1RZ0 A; 1T9M A; 3R5Z A; 4HMU A; 3R5L A; 3ZOF A; 2ECR A; 2HQ9 A; 2X1K A; 2QCK A; 1G78 A; 4Z85 A; 2PTF A; 1WLK A; 1G77 A; 2FG9 A; 1YLN A; 2I02 A; 3CP3 A; 3DNH A; 2E83 A; 2QEA A; 3B5M A; 5CHO A; 1NRG A; 4YWN A; 2HHZ A; 1W3R A; 3NFW A; 2ARZ A; 4L82 A; 3CB0 A; 3H96 A; 2D38 A; 3K88 A; 1TY9 A; 3DMB A; 5JAB A; 2AQ6 A; 2IML A; 3IN6 A; 3A20 A; 1Y30 A; 1USF A; 1EJE A; 2FHQ A; 2D37 A; 2NR4 A; 5ESC A; 1G79 A; 1W9A A; 2IG6 A; 2RDE A; 3U0I A; 2ASF A; 4IRA A; 3ZOH A; 2D5M A; 3F7E A; 1WGB A; 1G76 A; 3EC6 A; 1FLM A; 2RE7 A; 5BNC A; 1JNW A; 3FGE A; 3DB0 A; 2VPA A; 3R5Y A; 3TGV A; 3VYA A; 2FUR A; 2IAB A; 1AXJ A; 4F07 A; 4HMT A; 2GJG A; 3R5W A; 2OU5 A; 3HY8 A; 1XHN A; 2X1J A; 3A6Q A; 4HX6 A; 4R82 A; 3E4V A; 3ZOC A; 1CI0 A; 3GAS A; 1W3Q A; 3KYF A; 1XXO A; 2ED4 A; 4HMS A; 3KYG A; 2R6V A; 1W3P A; 3U5W A; 2Q9K A; 2HQ7 A; 1VL7 A; 3VY5 A; 2I51 A; 3R5R A; 1RZ1 A; 3ZOE A; 3U35 A; 3K87 A; 3R5P A; 4QVB A; 3VY2 A; 3ZOG A; 2ECU A; 4ZKY A; 3BPK A; 2A2J A; 3BA3 A; 3PFT A; 4HMW A; 4YBN A; 3U34 A; 1I0S A; 1I0R A; 1DNL A; 2HTI A; 2OL5 A; 3K86 A; 2R0X A; 3RH7 A; 1W3O A; 3AWH A; 2HTD A; 4XJ2 A; 5CHE C; 3A6R A; 3AMF A; 1WV4 A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
