3KAWA

Crystal structure of pa2107 protein from pseudomonas aeruginosa, northeast structural genomics consortium target par198
Total Genus 41
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
99
structure length
99
Chain Sequence
APEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords uncharacterized protein PA2107
publication title Northeast Structural Genomics Consortium Target PaR198
rcsb
source organism Pseudomonas aeruginosa
molecule tags Structural genomics, unknown function
total genus 41
structure length 99
sequence length 99
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature
pdb deposition date 2009-10-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03860 DUF326 Domain of Unknown Function (DUF326)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.360 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 3kawA00
3KAVA 5FIGA 3LMFA 3KAWA
chains in the Genus database with same CATH superfamily
1HWWA 3DPOA 2F1AA 3CAZA 3DPPA 4EZOA 2OBMA 4NQIA 1URUA 3BUBA 3Q84A 4EZVA 3D2FA 5C5BB 3D4ZA 4EZZA 1X04A 5C5BA 4H6HA 1E1DA 1O7DB 2QKWA 4IWPA 4R5IA 1QWUA 4DCNC 2YI9A 3VEAA 3DX4A 1I49A 4F01A 3T48A 2FYVA 1Y2OA 2F7RA 4NPHA 2MI7A 1MJGA 3G9GA 4AZBA 4AVMA 3I39X 3ZEDA 1R33A 4HR1B 3A98A 4E81A 3DX2A 2YKTA 4HR1A 3OWGA 3BLBA 2Q13A 1JQKA 2YLLA 2WYIA 4IM3A 3BVTA 1O7DC 2OBLA 3DX3A 3CZSA 2GAFD 1GN9A 4M0MA 4JLCA 1U00A 4PO2A 3T47A 2EWFA 1X03A 3Q0KA 3I2WA 3VKHA 1E9VA 2F18A 1W9MA 3D50A 3BVXA 4HY9A 4UDYX 4ATMA 3BVVA 2WYHA 1DKZA 1TQTA 2X3WA 4H8SA 4EZRA 2EX3B 4I1QA 3EJRA 4UDXX 4IWOA 2D1LA 4AZ6A 2ND0A 1UPXA 1ZWWA 3ACOA 3BUIA 2EFLA 4JWDA 3ERCC 4B9QA 2C08A 1TQSA 2ND1A 4JWCA 3HAHA 4HYBA 4IW0A 4R5KA 3GI7A 3VEBA 1E2UA 3D2EA 4AZHA 3CVRA 3DDFA 3ER8C 2X3XA 3BVWA 4FM3A 2Z8YA 1GNTA 3OK8A 3CZNA 4FZSA 5FIGA 3D4YA 3CV5A 4H6IA 4JL9A 1HXKA 3O3OB 3ER9B 3KDRA 4BNEA 3OHXM 4DYLA 3T49A 2X3VA 3BUDA 3SOGA 1TQVA 4R5GA 2N3KA 2RAIA 4IWQA 1I4LA 3L3OM 1SU8A 2FICA 4IM0A 3QA8A 4G6QA 5TKYA 2X5CA 2Z0VA 4EZTA 3DDGA 1QWNA 1OAOA 3KAWA 2OZNB 4EZNA 2EFKA 2F7QA 1SU7A 3B52X 3EJUA 3UITA 4EZUA 4NSWA 4FZPA 2ELBA 4R5LA 1I4TA 4AZCB 3B51X 4R5JA 4E3CA 4AZCA 3DX1A 4KIKB 3RPMA 4KIKA 4AZGA 2YL5A 3O3MB 4WPCA 3FD9A 3DX0A 1ZYLA 1QX1A 5E84A 2YIAA 2O0I1 2PMRA 3QWEA 1LQ7A 1OA1A 2OW7A 2GF4A 1YWMA 2Z0OA 3D52A 1I4DA 1TQWA 2F1BA 4EZPA 2LM0A 4AKVA 3QNJA 3I04A 3CKDA 2OW6A 1SUFA 3F7WA 1GNLA 1WDZA 4EZXA 1OA0A 5KBPA 3D51A 1R5EA 3LLLA 4D8JA 1R34A 4EZSA 3O3NB 4WPEA 2RAKA 3EJQA 2F7PA 2JNKA 2KHOA 2WINM 4JWIA 3HAJA 3KAVA 2ALWA 3BUPA 4JNEA 3I01A 3DYTA 2JNSA 2V0OA 2RAJA 3RV0A 4AZ5A 3M3WA 2YI8A 3B53X 4F00A 3T46A 1PS3A 1SU6A 3QE6A 2PY6A 2YL9A 2RT6A 1DKXA 2Z0NA 3DPQA 3PLTA 2QXLA 2YIVX 3QNIA 3ABHA 4EZWA 4JWEA 3C7NA 4JNFA 2OO2A 3BUQA 4IM2A 2YIBA 4EZQA 2NCZA 2ZXQA 3T4AG 3EJPA 2D4CA 1DKYA 2LXYA 2YL8A 3EJTA 4JN4A 3RV1A 1TQUA 4FZOA 2YL6A 5FLEX 2F7OA 4EZYA 3L3PA 4AZ7A 4AZIA 3HAIA 1HTYA 3BVUA 3LMFA 2GA9D 3EJSA 2YLAA 3SYVA 2Q12A 2QFFA 3LVTA
chains in the Genus database with same CATH topology
3DPOA 2KHOA 3DPPA 2ND0A 1OAOA 1UPXA 2WINM 4EZOA 3KAWA 4JWIA 2OBMA 3KAVA 4EZNA 4JNEA 1SU7A 3B52X 4EZVA 3I01A 3D2FA 3UITA 4JWDA 2JNSA 3ERCC 4B9QA 4EZZA 4EZUA 3RV0A 4H6HA 1E1DA 2ND1A 2YI8A 3B53X 4JWCA 4F00A 4R5LA 3T46A 4HYBA 1SU6A 2PY6A 2RT6A 4IWPA 4R5IA 4IW0A 3B51X 1DKXA 3DPQA 4R5KA 4R5JA 4E3CA 3GI7A 1E2UA 3D2EA 3VEBA 2YI9A 4KIKB 2QXLA 2YIVX 3ER8C 4KIKA 3VEAA 3O3MB 4EZWA 4F01A 3FD9A 3T48A 1ZYLA 4FM3A 2Z8YA 4NPHA 1MJGA 1GNTA 5E84A 3I39X 2YIAA 3ZEDA 4HR1B 3A98A 4JWEA 4E81A 3C7NA 4JNFA 4HR1A 5FIGA 3OWGA 1OA1A 4IM2A 2YIBA 1JQKA 4EZQA 4IM3A 2NCZA 3T4AG 4H6IA 4JL9A 2OBLA 2GAFD 1GN9A 3O3OB 4M0MA 3ER9B 4JLCA 3KDRA 1DKYA 4EZPA 1U00A 3OHXM 3T49A 4PO2A 3T47A 2LM0A 2EWFA 4JN4A 3QNJA 3I04A 3RV1A 3VKHA 4R5GA 1E9VA 5FLEX 2N3KA 1W9MA 4EZYA 1SUFA 4IWQA 3F7WA 1GNLA 4HY9A 4UDYX 4EZXA 3L3OM 1SU8A 4IM0A 3QA8A 1OA0A 4G6QA 3LMFA 1DKZA 5TKYA 2GA9D 2X5CA 4EZRA 4D8JA 2EX3B 4EZSA 2QFFA 3O3NB 4UDXX 4EZTA 4IWOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KAV A;  5FIG A;  3LMF A;  3KAW A; 
#chains in the Genus database with same CATH topology
 1HWW A;  3DPO A;  2F1A A;  3CAZ A;  3DPP A;  4EZO A;  2OBM A;  4NQI A;  1URU A;  3BUB A;  3Q84 A;  4EZV A;  3D2F A;  5C5B B;  3D4Z A;  4EZZ A;  1X04 A;  5C5B A;  4H6H A;  1E1D A;  1O7D B;  2QKW A;  4IWP A;  4R5I A;  1QWU A;  4DCN C;  2YI9 A;  3VEA A;  3DX4 A;  1I49 A;  4F01 A;  3T48 A;  2FYV A;  1Y2O A;  2F7R A;  4NPH A;  2MI7 A;  1MJG A;  3G9G A;  4AZB A;  4AVM A;  3I39 X;  3ZED A;  1R33 A;  4HR1 B;  3A98 A;  4E81 A;  3DX2 A;  2YKT A;  4HR1 A;  3OWG A;  3BLB A;  2Q13 A;  1JQK A;  2YLL A;  2WYI A;  4IM3 A;  3BVT A;  1O7D C;  2OBL A;  3DX3 A;  3CZS A;  2GAF D;  1GN9 A;  4M0M A;  4JLC A;  1U00 A;  4PO2 A;  3T47 A;  2EWF A;  1X03 A;  3Q0K A;  3I2W A;  3VKH A;  1E9V A;  2F18 A;  1W9M A;  3D50 A;  3BVX A;  4HY9 A;  4UDY X;  4ATM A;  3BVV A;  2WYH A;  1DKZ A;  1TQT A;  2X3W A;  4H8S A;  4EZR A;  2EX3 B;  4I1Q A;  3EJR A;  4UDX X;  4IWO A;  2D1L A;  4AZ6 A;  2ND0 A;  1UPX A;  1ZWW A;  3ACO A;  3BUI A;  2EFL A;  4JWD A;  3ERC C;  4B9Q A;  2C08 A;  1TQS A;  2ND1 A;  4JWC A;  3HAH A;  4HYB A;  4IW0 A;  4R5K A;  3GI7 A;  3VEB A;  1E2U A;  3D2E A;  4AZH A;  3CVR A;  3DDF A;  3ER8 C;  2X3X A;  3BVW A;  4FM3 A;  2Z8Y A;  1GNT A;  3OK8 A;  3CZN A;  4FZS A;  5FIG A;  3D4Y A;  3CV5 A;  4H6I A;  4JL9 A;  1HXK A;  3O3O B;  3ER9 B;  3KDR A;  4BNE A;  3OHX M;  4DYL A;  3T49 A;  2X3V A;  3BUD A;  3SOG A;  1TQV A;  4R5G A;  2N3K A;  2RAI A;  4IWQ A;  1I4L A;  3L3O M;  1SU8 A;  2FIC A;  4IM0 A;  3QA8 A;  4G6Q A;  5TKY A;  2X5C A;  2Z0V A;  4EZT A;  3DDG A;  1QWN A;  1OAO A;  3KAW A;  2OZN B;  4EZN A;  2EFK A;  2F7Q A;  1SU7 A;  3B52 X;  3EJU A;  3UIT A;  4EZU A;  4NSW A;  4FZP A;  2ELB A;  4R5L A;  1I4T A;  4AZC B;  3B51 X;  4R5J A;  4E3C A;  4AZC A;  3DX1 A;  4KIK B;  3RPM A;  4KIK A;  4AZG A;  2YL5 A;  3O3M B;  4WPC A;  3FD9 A;  3DX0 A;  1ZYL A;  1QX1 A;  5E84 A;  2YIA A;  2O0I 1;  2PMR A;  3QWE A;  1LQ7 A;  1OA1 A;  2OW7 A;  2GF4 A;  1YWM A;  2Z0O A;  3D52 A;  1I4D A;  1TQW A;  2F1B A;  4EZP A;  2LM0 A;  4AKV A;  3QNJ A;  3I04 A;  3CKD A;  2OW6 A;  1SUF A;  3F7W A;  1GNL A;  1WDZ A;  4EZX A;  1OA0 A;  5KBP A;  3D51 A;  1R5E A;  3LLL A;  4D8J A;  1R34 A;  4EZS A;  3O3N B;  4WPE A;  2RAK A;  3EJQ A;  2F7P A;  2JNK A;  2KHO A;  2WIN M;  4JWI A;  3HAJ A;  3KAV A;  2ALW A;  3BUP A;  4JNE A;  3I01 A;  3DYT A;  2JNS A;  2V0O A;  2RAJ A;  3RV0 A;  4AZ5 A;  3M3W A;  2YI8 A;  3B53 X;  4F00 A;  3T46 A;  1PS3 A;  1SU6 A;  3QE6 A;  2PY6 A;  2YL9 A;  2RT6 A;  1DKX A;  2Z0N A;  3DPQ A;  3PLT A;  2QXL A;  2YIV X;  3QNI A;  3ABH A;  4EZW A;  4JWE A;  3C7N A;  4JNF A;  2OO2 A;  3BUQ A;  4IM2 A;  2YIB A;  4EZQ A;  2NCZ A;  2ZXQ A;  3T4A G;  3EJP A;  2D4C A;  1DKY A;  2LXY A;  2YL8 A;  3EJT A;  4JN4 A;  3RV1 A;  1TQU A;  4FZO A;  2YL6 A;  5FLE X;  2F7O A;  4EZY A;  3L3P A;  4AZ7 A;  4AZI A;  3HAI A;  1HTY A;  3BVU A;  3LMF A;  2GA9 D;  3EJS A;  2YLA A;  3SYV A;  2Q12 A;  2QFF A;  3LVT A; 
#chains in the Genus database with same CATH homology
 3DPO A;  2KHO A;  3DPP A;  2ND0 A;  1OAO A;  1UPX A;  2WIN M;  4EZO A;  3KAW A;  4JWI A;  2OBM A;  3KAV A;  4EZN A;  4JNE A;  1SU7 A;  3B52 X;  4EZV A;  3I01 A;  3D2F A;  3UIT A;  4JWD A;  2JNS A;  3ERC C;  4B9Q A;  4EZZ A;  4EZU A;  3RV0 A;  4H6H A;  1E1D A;  2ND1 A;  2YI8 A;  3B53 X;  4JWC A;  4F00 A;  4R5L A;  3T46 A;  4HYB A;  1SU6 A;  2PY6 A;  2RT6 A;  4IWP A;  4R5I A;  4IW0 A;  3B51 X;  1DKX A;  3DPQ A;  4R5K A;  4R5J A;  4E3C A;  3GI7 A;  1E2U A;  3D2E A;  3VEB A;  2YI9 A;  4KIK B;  2QXL A;  2YIV X;  3ER8 C;  4KIK A;  3VEA A;  3O3M B;  4EZW A;  4F01 A;  3FD9 A;  3T48 A;  1ZYL A;  4FM3 A;  2Z8Y A;  4NPH A;  1MJG A;  1GNT A;  5E84 A;  3I39 X;  2YIA A;  3ZED A;  4HR1 B;  3A98 A;  4JWE A;  4E81 A;  3C7N A;  4JNF A;  4HR1 A;  5FIG A;  3OWG A;  1OA1 A;  4IM2 A;  2YIB A;  1JQK A;  4EZQ A;  4IM3 A;  2NCZ A;  3T4A G;  4H6I A;  4JL9 A;  2OBL A;  2GAF D;  1GN9 A;  3O3O B;  4M0M A;  3ER9 B;  4JLC A;  3KDR A;  1DKY A;  4EZP A;  1U00 A;  3OHX M;  3T49 A;  4PO2 A;  3T47 A;  2LM0 A;  2EWF A;  4JN4 A;  3QNJ A;  3I04 A;  3RV1 A;  3VKH A;  4R5G A;  1E9V A;  5FLE X;  2N3K A;  1W9M A;  4EZY A;  1SUF A;  4IWQ A;  3F7W A;  1GNL A;  4HY9 A;  4UDY X;  4EZX A;  3L3O M;  1SU8 A;  4IM0 A;  3QA8 A;  1OA0 A;  4G6Q A;  3LMF A;  1DKZ A;  5TKY A;  2GA9 D;  2X5C A;  4EZR A;  4D8J A;  2EX3 B;  4EZS A;  2QFF A;  3O3N B;  4UDX X;  4EZT A;  4IWO A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...