3KI6A

Catalytic fragment of cholix toxin from vibrio cholerae in complex with inhibitor gp-l
Total Genus 53
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
53
sequence length
206
structure length
198
Chain Sequence
GSHMAVITPQGVTNWTYQELEATHQALTREGYVFVGYHGTNHVAAQTIVNRIAPNEEKWGGLYVATHAEVAHGYARIKEGTGEYGLPTRAERDARGVMLRVYIPRASLERFYRTNTPLENAEEHITQVIGHSLPLRNEAFTGPESAGGEDETVIGWDMAIHAVAIPSTIPGNAYEELAIDEEAVAKEQSISTKPPYKE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase,toxin
molecule keywords Cholix toxin
publication title Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
rcsb
source organism Vibrio cholerae
total genus 53
structure length 198
sequence length 206
ec nomenclature ec 2.4.2.36: NAD(+)--diphthamide ADP-ribosyltransferase.
pdb deposition date 2009-10-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF09009 Exotox-A_cataly Exotoxin A catalytic
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.175.10 Alpha Beta Alpha-Beta Complex Diphtheria Toxin; domain 1 Diphtheria Toxin, domain 1 3ki6A00
2Q5TA 4OW6A 1SGKA 1IKQA 1F0LA 1DDTA 5I82A 3B82B 1DMAA 1XK9A 1ZM3B 3KI4A 1DTPA 2ZITB 3KI3A 3KI7A 3B78B 3KI6A 3ESSA 1AERA 1IKPA 3B8HB 3Q9OA 1MDTA 3KI1A 4AE1A 3NY6A 1TOXA 4AE0A 1ZM4B 1XDTT 3KI2A 1ZM2B 3KI5A 3KI0A 1ZM9B 2Q6MA
chains in the Genus database with same CATH superfamily
2Q5TA 4OW6A 1SGKA 1IKQA 1F0LA 1DDTA 5I82A 3B82B 1DMAA 1XK9A 1ZM3B 3KI4A 1DTPA 2ZITB 3KI3A 3KI7A 3B78B 3KI6A 3ESSA 1AERA 1IKPA 3B8HB 3Q9OA 1MDTA 3KI1A 4AE1A 3NY6A 1TOXA 4AE0A 1ZM4B 1XDTT 3KI2A 1ZM2B 3KI5A 3KI0A 1ZM9B 2Q6MA
chains in the Genus database with same CATH topology
2Q5TA 4OW6A 1SGKA 1IKQA 1F0LA 1DDTA 5I82A 3B82B 1DMAA 1XK9A 1ZM3B 3KI4A 1DTPA 2ZITB 3KI3A 3KI7A 3B78B 3KI6A 3ESSA 1AERA 1IKPA 3B8HB 3Q9OA 1MDTA 3KI1A 4AE1A 3NY6A 1TOXA 4AE0A 1ZM4B 1XDTT 3KI2A 1ZM2B 3KI5A 3KI0A 1ZM9B 2Q6MA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Q5T A;  4OW6 A;  1SGK A;  1IKQ A;  1F0L A;  1DDT A;  5I82 A;  3B82 B;  1DMA A;  1XK9 A;  1ZM3 B;  3KI4 A;  1DTP A;  2ZIT B;  3KI3 A;  3KI7 A;  3B78 B;  3KI6 A;  3ESS A;  1AER A;  1IKP A;  3B8H B;  3Q9O A;  1MDT A;  3KI1 A;  4AE1 A;  3NY6 A;  1TOX A;  4AE0 A;  1ZM4 B;  1XDT T;  3KI2 A;  1ZM2 B;  3KI5 A;  3KI0 A;  1ZM9 B;  2Q6M A; 
#chains in the Genus database with same CATH topology
 2Q5T A;  4OW6 A;  1SGK A;  1IKQ A;  1F0L A;  1DDT A;  5I82 A;  3B82 B;  1DMA A;  1XK9 A;  1ZM3 B;  3KI4 A;  1DTP A;  2ZIT B;  3KI3 A;  3KI7 A;  3B78 B;  3KI6 A;  3ESS A;  1AER A;  1IKP A;  3B8H B;  3Q9O A;  1MDT A;  3KI1 A;  4AE1 A;  3NY6 A;  1TOX A;  4AE0 A;  1ZM4 B;  1XDT T;  3KI2 A;  1ZM2 B;  3KI5 A;  3KI0 A;  1ZM9 B;  2Q6M A; 
#chains in the Genus database with same CATH homology
 2Q5T A;  4OW6 A;  1SGK A;  1IKQ A;  1F0L A;  1DDT A;  5I82 A;  3B82 B;  1DMA A;  1XK9 A;  1ZM3 B;  3KI4 A;  1DTP A;  2ZIT B;  3KI3 A;  3KI7 A;  3B78 B;  3KI6 A;  3ESS A;  1AER A;  1IKP A;  3B8H B;  3Q9O A;  1MDT A;  3KI1 A;  4AE1 A;  3NY6 A;  1TOX A;  4AE0 A;  1ZM4 B;  1XDT T;  3KI2 A;  1ZM2 B;  3KI5 A;  3KI0 A;  1ZM9 B;  2Q6M A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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