3KJMA

Leu492ala mutant of maize cytokinin oxidase/dehydrogenase complexed with phenylurea inhibitor cppu
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
502
structure length
496
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYAARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase/inhibitor
molecule keywords Cytokinin dehydrogenase 1
publication title Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
pubmed doi rcsb
source organism Zea mays
total genus 170
structure length 496
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2009-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3kjmA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3kjmA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3kjmA03
3GSYA 3NS1B 3HRDC 2O3GA 3S1EA 2Q85A 1AHZA 3PM9A 4JAYA 2QPMA 5ADZA 2QKNA 3FWAA 3NVVB 3ETRB 1W1SA 2VAOA 4PVHA 5FXEA 2VFTA 2W55A 3DEDA 1QLTA 3FW9A 2P4PA 3NVZB 5G5GB 1FIQB 1W1LA 4PWCA 1WYGA 4UD8A 5AE1A 1W1KA 2VFVA 4MLAA 4ZOHB 2R8DA 3DQ0A 4JB1A 1ZR6A 1N60C 1WVFA 2W3RA 3D2DA 1MBBA 1N5XA 3W8WA 1DIIA 1FFUC 3S1FA 1E8HA 2OAIA 4DNSA 1MBTA 1T3QC 2Q4WA 5AE3A 5FXPA 3JS8A 1FO4A 1JRPA 4XLOA 2I0KA 1W1QA 1ZXIC 1RM6B 4PZFA 1W1RA 2EXRA 4BCAA 1AHVA 1E0YA 1AHUA 3AM9A 3D2JA 3LLBA 2GQUA 5HMRA 3LAEA 1JROA 5HQXA 4PVKA 3FW8A 2P3HA 1VAOA 2RK5A 4O95A 3VTEA 1FFVC 1N63C 1DZNA 2W54A 1F0XA 2YVSA 4PYTA 2GQTA 4HG0A 2BVGA 4EC3A 2BVFA 1DIQA 3SR6B 2P13A 3AN1A 1E8FA 4BC7A 4PWBA 3I99A 4BBYA 2VFRA 2BVHA 3FW7A 3S1CA 4OALA 5HHZA 1UXYA 3BW7A 3D2HA 1VDVA 2PLIA 3NVWB 1QLUA 1SB3B 3W8ZA 1W1OA 2E3TA 1V97A 3TSJA 3AMZA 3NVYB 2VFUA 1E8GA 3EUB3 5G5HB 5D79A 2W3SA 2MBRA 2PLSA 1HSKA 1I19A 1N61C 4PVEA 2VFSA 5AE2A 2AXRA 5FXFA 1N62C 1N5WC 3B9JB 2R2ZA 3TX1A 1W1JA 4PVJA 5FXDA 1WVEA 3KJMA 3C0PA 1W1MA 3NRZB 4BC9A 3W8XA 3S1DA 2NQWA 4ML8A 3TSHA
chains in the Genus database with same CATH superfamily
3GSYA 3NS1B 3HRDC 3PQBA 2O3GA 3S1EA 2Q85A 1AHZA 3PM9A 4JAYA 2QPMA 5ADZA 3POPA 2Y08A 2QKNA 3FWAA 3NVVB 3EJDB 3ETRB 1W1SA 2VAOA 5K8EA 4PVHA 5FXEA 2WDWA 2VFTA 2W55A 3DEDA 1QLTA 3FW9A 2P4PA 3NVZB 5G5GB 1FIQB 1W1LA 3RJ8A 4PWCA 1WYGA 4UD8A 5AE1A 1W1KA 2VFVA 4MLAA 4ZOHB 2R8DA 3DQ0A 4JB1A 1ZR6A 1N60C 1WVFA 2W3RA 3D2DA 1MBBA 1N5XA 3W8WA 1DIIA 1FFUC 3S1FA 1E8HA 2OAIA 4DNSA 1MBTA 1T3QC 2Q4WA 5AE3A 5FXPA 3JS8A 1FO4A 1JRPA 4XLOA 2I0KA 1W1QA 1ZXIC 1RM6B 4PZFA 1W1RA 2EXRA 4BCAA 1AHVA 1E0YA 1AHUA 3AM9A 3D2JA 5I1VA 3EJBB 3LLBA 2GQUA 5HMRA 3LAEA 1JROA 5HQXA 4PVKA 3FW8A 2P3HA 1VAOA 2RK5A 4O95A 3VTEA 1FFVC 1N63C 1DZNA 2W54A 1F0XA 2YVSA 4PYTA 2GQTA 4HG0A 3RJAA 5L6FA 2BVGA 4EC3A 2BVFA 1DIQA 3SR6B 2P13A 3AN1A 5L6GA 1E8FA 4BC7A 4PWBA 2Y3RA 3I99A 4BBYA 2VFRA 2BVHA 3FW7A 2UUVA 3S1CA 4OALA 5HHZA 1UXYA 3BW7A 3D2HA 1VDVA 2PLIA 3NVWB 1QLUA 1SB3B 3W8ZA 1W1OA 2E3TA 3HSUA 5AWVA 1V97A 3TSJA 3AMZA 3NVYB 2VFUA 1E8GA 3EUB3 5G5HB 5D79A 2W3SA 2MBRA 2Y3SA 3EJEB 2PLSA 1HSKA 1I19A 1N61C 4PVEA 2VFSA 5AE2A 2AXRA 5FXFA 2IPIA 1N62C 1N5WC 3B9JB 2R2ZA 2Y4GA 3TX1A 1W1JA 4PVJA 5FXDA 1WVEA 3KJMA 3C0PA 1W1MA 2UUUA 3NRZB 4BC9A 3W8XA 5I1WA 3S1DA 2NQWA 4ML8A 3TSHA
chains in the Genus database with same CATH topology
3GSYA 3NS1B 3HRDC 3PQBA 2O3GA 3S1EA 2Q85A 1AHZA 3PM9A 4JAYA 2QPMA 5ADZA 3POPA 2Y08A 2QKNA 3FWAA 3NVVB 3ETRB 1W1SA 2VAOA 5K8EA 4PVHA 5FXEA 2WDWA 2VFTA 2W55A 3DEDA 1QLTA 3FW9A 2P4PA 3NVZB 5G5GB 1FIQB 1W1LA 3RJ8A 4PWCA 1WYGA 4UD8A 5AE1A 1W1KA 2VFVA 4MLAA 4ZOHB 2R8DA 3DQ0A 4JB1A 1ZR6A 1N60C 1WVFA 2W3RA 3D2DA 1MBBA 1N5XA 3W8WA 1DIIA 1FFUC 3S1FA 1E8HA 2OAIA 4DNSA 1MBTA 1T3QC 2Q4WA 5AE3A 5FXPA 3JS8A 1FO4A 1JRPA 4XLOA 2I0KA 1W1QA 1ZXIC 1RM6B 4PZFA 1W1RA 2EXRA 4BCAA 1AHVA 1E0YA 1AHUA 3AM9A 3D2JA 5I1VA 3LLBA 2GQUA 5HMRA 3LAEA 1JROA 5HQXA 4PVKA 3FW8A 2P3HA 1VAOA 2RK5A 4O95A 3VTEA 1FFVC 1N63C 1DZNA 2W54A 1F0XA 2YVSA 4PYTA 2GQTA 4HG0A 3RJAA 5L6FA 2BVGA 4EC3A 2BVFA 1DIQA 3SR6B 2P13A 3AN1A 5L6GA 1E8FA 4BC7A 4PWBA 2Y3RA 3I99A 4BBYA 2VFRA 2BVHA 3FW7A 2UUVA 3S1CA 4OALA 5HHZA 1UXYA 3BW7A 3D2HA 1VDVA 2PLIA 3NVWB 1QLUA 1SB3B 3W8ZA 1W1OA 2E3TA 3HSUA 5AWVA 1V97A 3TSJA 3AMZA 3NVYB 2VFUA 1E8GA 3EUB3 5G5HB 5D79A 2W3SA 2MBRA 2Y3SA 2PLSA 1HSKA 1I19A 1N61C 4PVEA 2VFSA 5AE2A 2AXRA 5FXFA 2IPIA 1N62C 1N5WC 3B9JB 2R2ZA 2Y4GA 3TX1A 1W1JA 4PVJA 5FXDA 1WVEA 3KJMA 3C0PA 1W1MA 2UUUA 3NRZB 4BC9A 3W8XA 5I1WA 3S1DA 2NQWA 4ML8A 3TSHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GSY A;  3NS1 B;  3HRD C;  2O3G A;  3S1E A;  2Q85 A;  1AHZ A;  3PM9 A;  4JAY A;  2QPM A;  5ADZ A;  2QKN A;  3FWA A;  3NVV B;  3ETR B;  1W1S A;  2VAO A;  4PVH A;  5FXE A;  2VFT A;  2W55 A;  3DED A;  1QLT A;  3FW9 A;  2P4P A;  3NVZ B;  5G5G B;  1FIQ B;  1W1L A;  4PWC A;  1WYG A;  4UD8 A;  5AE1 A;  1W1K A;  2VFV A;  4MLA A;  4ZOH B;  2R8D A;  3DQ0 A;  4JB1 A;  1ZR6 A;  1N60 C;  1WVF A;  2W3R A;  3D2D A;  1MBB A;  1N5X A;  3W8W A;  1DII A;  1FFU C;  3S1F A;  1E8H A;  2OAI A;  4DNS A;  1MBT A;  1T3Q C;  2Q4W A;  5AE3 A;  5FXP A;  3JS8 A;  1FO4 A;  1JRP A;  4XLO A;  2I0K A;  1W1Q A;  1ZXI C;  1RM6 B;  4PZF A;  1W1R A;  2EXR A;  4BCA A;  1AHV A;  1E0Y A;  1AHU A;  3AM9 A;  3D2J A;  3LLB A;  2GQU A;  5HMR A;  3LAE A;  1JRO A;  5HQX A;  4PVK A;  3FW8 A;  2P3H A;  1VAO A;  2RK5 A;  4O95 A;  3VTE A;  1FFV C;  1N63 C;  1DZN A;  2W54 A;  1F0X A;  2YVS A;  4PYT A;  2GQT A;  4HG0 A;  2BVG A;  4EC3 A;  2BVF A;  1DIQ A;  3SR6 B;  2P13 A;  3AN1 A;  1E8F A;  4BC7 A;  4PWB A;  3I99 A;  4BBY A;  2VFR A;  2BVH A;  3FW7 A;  3S1C A;  4OAL A;  5HHZ A;  1UXY A;  3BW7 A;  3D2H A;  1VDV A;  2PLI A;  3NVW B;  1QLU A;  1SB3 B;  3W8Z A;  1W1O A;  2E3T A;  1V97 A;  3TSJ A;  3AMZ A;  3NVY B;  2VFU A;  1E8G A;  3EUB 3;  5G5H B;  5D79 A;  2W3S A;  2MBR A;  2PLS A;  1HSK A;  1I19 A;  1N61 C;  4PVE A;  2VFS A;  5AE2 A;  2AXR A;  5FXF A;  1N62 C;  1N5W C;  3B9J B;  2R2Z A;  3TX1 A;  1W1J A;  4PVJ A;  5FXD A;  1WVE A;  3KJM A;  3C0P A;  1W1M A;  3NRZ B;  4BC9 A;  3W8X A;  3S1D A;  2NQW A;  4ML8 A;  3TSH A; 
#chains in the Genus database with same CATH topology
 3GSY A;  3NS1 B;  3HRD C;  3PQB A;  2O3G A;  3S1E A;  2Q85 A;  1AHZ A;  3PM9 A;  4JAY A;  2QPM A;  5ADZ A;  3POP A;  2Y08 A;  2QKN A;  3FWA A;  3NVV B;  3EJD B;  3ETR B;  1W1S A;  2VAO A;  5K8E A;  4PVH A;  5FXE A;  2WDW A;  2VFT A;  2W55 A;  3DED A;  1QLT A;  3FW9 A;  2P4P A;  3NVZ B;  5G5G B;  1FIQ B;  1W1L A;  3RJ8 A;  4PWC A;  1WYG A;  4UD8 A;  5AE1 A;  1W1K A;  2VFV A;  4MLA A;  4ZOH B;  2R8D A;  3DQ0 A;  4JB1 A;  1ZR6 A;  1N60 C;  1WVF A;  2W3R A;  3D2D A;  1MBB A;  1N5X A;  3W8W A;  1DII A;  1FFU C;  3S1F A;  1E8H A;  2OAI A;  4DNS A;  1MBT A;  1T3Q C;  2Q4W A;  5AE3 A;  5FXP A;  3JS8 A;  1FO4 A;  1JRP A;  4XLO A;  2I0K A;  1W1Q A;  1ZXI C;  1RM6 B;  4PZF A;  1W1R A;  2EXR A;  4BCA A;  1AHV A;  1E0Y A;  1AHU A;  3AM9 A;  3D2J A;  5I1V A;  3EJB B;  3LLB A;  2GQU A;  5HMR A;  3LAE A;  1JRO A;  5HQX A;  4PVK A;  3FW8 A;  2P3H A;  1VAO A;  2RK5 A;  4O95 A;  3VTE A;  1FFV C;  1N63 C;  1DZN A;  2W54 A;  1F0X A;  2YVS A;  4PYT A;  2GQT A;  4HG0 A;  3RJA A;  5L6F A;  2BVG A;  4EC3 A;  2BVF A;  1DIQ A;  3SR6 B;  2P13 A;  3AN1 A;  5L6G A;  1E8F A;  4BC7 A;  4PWB A;  2Y3R A;  3I99 A;  4BBY A;  2VFR A;  2BVH A;  3FW7 A;  2UUV A;  3S1C A;  4OAL A;  5HHZ A;  1UXY A;  3BW7 A;  3D2H A;  1VDV A;  2PLI A;  3NVW B;  1QLU A;  1SB3 B;  3W8Z A;  1W1O A;  2E3T A;  3HSU A;  5AWV A;  1V97 A;  3TSJ A;  3AMZ A;  3NVY B;  2VFU A;  1E8G A;  3EUB 3;  5G5H B;  5D79 A;  2W3S A;  2MBR A;  2Y3S A;  3EJE B;  2PLS A;  1HSK A;  1I19 A;  1N61 C;  4PVE A;  2VFS A;  5AE2 A;  2AXR A;  5FXF A;  2IPI A;  1N62 C;  1N5W C;  3B9J B;  2R2Z A;  2Y4G A;  3TX1 A;  1W1J A;  4PVJ A;  5FXD A;  1WVE A;  3KJM A;  3C0P A;  1W1M A;  2UUU A;  3NRZ B;  4BC9 A;  3W8X A;  5I1W A;  3S1D A;  2NQW A;  4ML8 A;  3TSH A; 
#chains in the Genus database with same CATH homology
 3GSY A;  3NS1 B;  3HRD C;  3PQB A;  2O3G A;  3S1E A;  2Q85 A;  1AHZ A;  3PM9 A;  4JAY A;  2QPM A;  5ADZ A;  3POP A;  2Y08 A;  2QKN A;  3FWA A;  3NVV B;  3ETR B;  1W1S A;  2VAO A;  5K8E A;  4PVH A;  5FXE A;  2WDW A;  2VFT A;  2W55 A;  3DED A;  1QLT A;  3FW9 A;  2P4P A;  3NVZ B;  5G5G B;  1FIQ B;  1W1L A;  3RJ8 A;  4PWC A;  1WYG A;  4UD8 A;  5AE1 A;  1W1K A;  2VFV A;  4MLA A;  4ZOH B;  2R8D A;  3DQ0 A;  4JB1 A;  1ZR6 A;  1N60 C;  1WVF A;  2W3R A;  3D2D A;  1MBB A;  1N5X A;  3W8W A;  1DII A;  1FFU C;  3S1F A;  1E8H A;  2OAI A;  4DNS A;  1MBT A;  1T3Q C;  2Q4W A;  5AE3 A;  5FXP A;  3JS8 A;  1FO4 A;  1JRP A;  4XLO A;  2I0K A;  1W1Q A;  1ZXI C;  1RM6 B;  4PZF A;  1W1R A;  2EXR A;  4BCA A;  1AHV A;  1E0Y A;  1AHU A;  3AM9 A;  3D2J A;  5I1V A;  3LLB A;  2GQU A;  5HMR A;  3LAE A;  1JRO A;  5HQX A;  4PVK A;  3FW8 A;  2P3H A;  1VAO A;  2RK5 A;  4O95 A;  3VTE A;  1FFV C;  1N63 C;  1DZN A;  2W54 A;  1F0X A;  2YVS A;  4PYT A;  2GQT A;  4HG0 A;  3RJA A;  5L6F A;  2BVG A;  4EC3 A;  2BVF A;  1DIQ A;  3SR6 B;  2P13 A;  3AN1 A;  5L6G A;  1E8F A;  4BC7 A;  4PWB A;  2Y3R A;  3I99 A;  4BBY A;  2VFR A;  2BVH A;  3FW7 A;  2UUV A;  3S1C A;  4OAL A;  5HHZ A;  1UXY A;  3BW7 A;  3D2H A;  1VDV A;  2PLI A;  3NVW B;  1QLU A;  1SB3 B;  3W8Z A;  1W1O A;  2E3T A;  3HSU A;  5AWV A;  1V97 A;  3TSJ A;  3AMZ A;  3NVY B;  2VFU A;  1E8G A;  3EUB 3;  5G5H B;  5D79 A;  2W3S A;  2MBR A;  2Y3S A;  2PLS A;  1HSK A;  1I19 A;  1N61 C;  4PVE A;  2VFS A;  5AE2 A;  2AXR A;  5FXF A;  2IPI A;  1N62 C;  1N5W C;  3B9J B;  2R2Z A;  2Y4G A;  3TX1 A;  1W1J A;  4PVJ A;  5FXD A;  1WVE A;  3KJM A;  3C0P A;  1W1M A;  2UUU A;  3NRZ B;  4BC9 A;  3W8X A;  5I1W A;  3S1D A;  2NQW A;  4ML8 A;  3TSH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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