3KJMA

Leu492ala mutant of maize cytokinin oxidase/dehydrogenase complexed with phenylurea inhibitor cppu
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
502
structure length
496
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYAARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
pubmed doi rcsb
source organism Zea mays
molecule tags Oxidoreductase/inhibitor
molecule keywords Cytokinin dehydrogenase 1
total genus 170
structure length 496
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2009-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3kjmA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3kjmA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3kjmA03
1T3QC 5FXEA 1SB3B 3W8XA 1FO4A 2BVFA 1ZXIC 1N60C 3NRZB 1DZNA 2AXRA 1MBTA 5AE1A 4UD8A 1W1QA 3AM9A 4PVHA 2VAOA 2GQTA 2O3GA 3NVWB 1RM6B 3NVYB 4BCAA 5FXDA 3NVVB 1FIQB 2QPMA 3AN1A 3GSYA 1WVEA 3VTEA 2OAIA 2I0KA 1W1MA 4BC9A 5ADZA 3S1CA 2R2ZA 1V97A 3FW8A 4PVEA 2VFSA 1W1SA 1F0XA 1ZR6A 2Q85A 2W3RA 2MBRA 3W8ZA 4PWBA 4PWCA 1FFUC 3EUB3 5D79A 5G5HB 4O95A 3TSJA 1N5XA 1W1LA 2EXRA 2BVGA 4XLOA 4PYTA 5AE2A 5G5GB 3AMZA 4PVKA 3D2JA 1VDVA 4JB1A 1W1JA 2W3SA 3LAEA 2RK5A 3W8WA 3TX1A 1E8HA 3DEDA 4BC7A 5FXPA 1WYGA 4EC3A 3S1DA 1E8GA 4JAYA 2W54A 3TSHA 2P13A 2PLSA 1DIQA 3D2HA 2GQUA 3JS8A 1WVFA 1HSKA 1JRPA 2VFTA 3KJMA 2VFUA 1E0YA 1W1KA 4DNSA 1W1RA 4HG0A 1N62C 5HMRA 1AHZA 4PZFA 2NQWA 4BBYA 2VFVA 4ML8A 2YVSA 3B9JB 3FW7A 2Q4WA 3I99A 5FXFA 3LLBA 3BW7A 3HRDC 1MBBA 1N61C 1E8FA 1N5WC 1W1OA 3NVZB 2QKNA 4OALA 3S1EA 2P3HA 1AHUA 2E3TA 1JROA 2BVHA 4MLAA 3C0PA 1AHVA 3FWAA 2PLIA 3FW9A 4PVJA 3S1FA 3PM9A 5AE3A 1UXYA 1VAOA 3NS1B 1I19A 3ETRB 5HHZA 3D2DA 1N63C 5HQXA 2P4PA 1DIIA 3DQ0A 2VFRA 1QLTA 2W55A 3SR6B 4ZOHB 2R8DA 1FFVC 1QLUA
chains in the Genus database with same CATH superfamily
1T3QC 5FXEA 3RJAA 1SB3B 3W8XA 1FO4A 2BVFA 1ZXIC 1N60C 3NRZB 5I1WA 1DZNA 2AXRA 1MBTA 5AE1A 4UD8A 1W1QA 3AM9A 4PVHA 2VAOA 2GQTA 3NVWB 2O3GA 1RM6B 3NVYB 2IPIA 4BCAA 3NVVB 5FXDA 1FIQB 2QPMA 3AN1A 3GSYA 1WVEA 3VTEA 2OAIA 2I0KA 1W1MA 4BC9A 5ADZA 3S1CA 2R2ZA 1V97A 3FW8A 4PVEA 2VFSA 1W1SA 1F0XA 2Y3SA 1ZR6A 2Q85A 3HSUA 5L6GA 2W3RA 2MBRA 3W8ZA 5AWVA 4PWBA 4PWCA 1FFUC 3EUB3 5D79A 5G5HB 4O95A 3EJDB 2UUVA 3TSJA 1N5XA 1W1LA 2EXRA 2BVGA 4XLOA 4PYTA 5AE2A 5G5GB 3PQBA 3AMZA 4PVKA 3D2JA 1VDVA 4JB1A 1W1JA 2W3SA 3LAEA 2RK5A 3W8WA 3TX1A 1E8HA 3DEDA 4BC7A 5FXPA 3POPA 1WYGA 4EC3A 3S1DA 2UUUA 1E8GA 4JAYA 2W54A 3TSHA 2P13A 2PLSA 2Y3RA 1DIQA 2Y08A 3D2HA 2GQUA 3JS8A 5K8EA 1WVFA 1HSKA 1JRPA 2VFTA 3KJMA 2VFUA 1E0YA 1W1KA 4DNSA 1W1RA 4HG0A 1N62C 5HMRA 3EJEB 1AHZA 3RJ8A 4PZFA 2NQWA 4BBYA 2VFVA 4ML8A 2YVSA 3B9JB 3FW7A 2Q4WA 3I99A 5FXFA 3LLBA 3BW7A 3HRDC 1MBBA 1N61C 1E8FA 1N5WC 1W1OA 3NVZB 2QKNA 4OALA 3S1EA 2P3HA 1AHUA 2E3TA 1JROA 2BVHA 4MLAA 3C0PA 1AHVA 3FWAA 2PLIA 3FW9A 4PVJA 3S1FA 5L6FA 3PM9A 5AE3A 1UXYA 1VAOA 3NS1B 3ETRB 1I19A 5HHZA 3D2DA 1N63C 3EJBB 2WDWA 5HQXA 5I1VA 2P4PA 1DIIA 3DQ0A 2VFRA 1QLTA 2W55A 3SR6B 4ZOHB 2R8DA 1FFVC 2Y4GA 1QLUA
chains in the Genus database with same CATH topology
1T3QC 5FXEA 3RJAA 1SB3B 3W8XA 1FO4A 2BVFA 1ZXIC 1N60C 3NRZB 5I1WA 1DZNA 2AXRA 1MBTA 5AE1A 4UD8A 1W1QA 3AM9A 4PVHA 2VAOA 2GQTA 2O3GA 3NVWB 1RM6B 3NVYB 2IPIA 4BCAA 5FXDA 3NVVB 1FIQB 2QPMA 3AN1A 3GSYA 1WVEA 3VTEA 2OAIA 2I0KA 1W1MA 4BC9A 5ADZA 3S1CA 2R2ZA 1V97A 3FW8A 4PVEA 2VFSA 1W1SA 1F0XA 2Y3SA 1ZR6A 2Q85A 3HSUA 5L6GA 2W3RA 2MBRA 3W8ZA 5AWVA 4PWBA 4PWCA 1FFUC 3EUB3 5D79A 5G5HB 4O95A 2UUVA 3TSJA 1N5XA 1W1LA 2EXRA 2BVGA 4XLOA 4PYTA 5AE2A 5G5GB 3PQBA 3AMZA 4PVKA 3D2JA 1VDVA 4JB1A 1W1JA 2W3SA 3LAEA 2RK5A 3W8WA 3TX1A 1E8HA 3DEDA 4BC7A 5FXPA 3POPA 1WYGA 4EC3A 3S1DA 2UUUA 1E8GA 4JAYA 2W54A 3TSHA 2P13A 2PLSA 2Y3RA 1DIQA 2Y08A 3D2HA 2GQUA 3JS8A 5K8EA 1WVFA 1HSKA 1JRPA 2VFTA 3KJMA 2VFUA 1E0YA 1W1KA 4DNSA 1W1RA 4HG0A 1N62C 5HMRA 1AHZA 3RJ8A 4PZFA 2NQWA 4BBYA 2VFVA 4ML8A 2YVSA 3B9JB 3FW7A 2Q4WA 3I99A 5FXFA 3LLBA 3BW7A 3HRDC 1MBBA 1N61C 1E8FA 1N5WC 1W1OA 3NVZB 2QKNA 4OALA 3S1EA 2P3HA 1AHUA 2E3TA 1JROA 2BVHA 4MLAA 3C0PA 1AHVA 3FWAA 2PLIA 3FW9A 4PVJA 3S1FA 5L6FA 3PM9A 5AE3A 1UXYA 1VAOA 3NS1B 1I19A 3ETRB 5HHZA 3D2DA 1N63C 2WDWA 5HQXA 5I1VA 2P4PA 1DIIA 3DQ0A 2VFRA 1QLTA 2W55A 3SR6B 4ZOHB 2R8DA 1FFVC 2Y4GA 1QLUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T3Q C;  5FXE A;  1SB3 B;  3W8X A;  1FO4 A;  2BVF A;  1ZXI C;  1N60 C;  3NRZ B;  1DZN A;  2AXR A;  1MBT A;  5AE1 A;  4UD8 A;  1W1Q A;  3AM9 A;  4PVH A;  2VAO A;  2GQT A;  2O3G A;  3NVW B;  1RM6 B;  3NVY B;  4BCA A;  5FXD A;  3NVV B;  1FIQ B;  2QPM A;  3AN1 A;  3GSY A;  1WVE A;  3VTE A;  2OAI A;  2I0K A;  1W1M A;  4BC9 A;  5ADZ A;  3S1C A;  2R2Z A;  1V97 A;  3FW8 A;  4PVE A;  2VFS A;  1W1S A;  1F0X A;  1ZR6 A;  2Q85 A;  2W3R A;  2MBR A;  3W8Z A;  4PWB A;  4PWC A;  1FFU C;  3EUB 3;  5D79 A;  5G5H B;  4O95 A;  3TSJ A;  1N5X A;  1W1L A;  2EXR A;  2BVG A;  4XLO A;  4PYT A;  5AE2 A;  5G5G B;  3AMZ A;  4PVK A;  3D2J A;  1VDV A;  4JB1 A;  1W1J A;  2W3S A;  3LAE A;  2RK5 A;  3W8W A;  3TX1 A;  1E8H A;  3DED A;  4BC7 A;  5FXP A;  1WYG A;  4EC3 A;  3S1D A;  1E8G A;  4JAY A;  2W54 A;  3TSH A;  2P13 A;  2PLS A;  1DIQ A;  3D2H A;  2GQU A;  3JS8 A;  1WVF A;  1HSK A;  1JRP A;  2VFT A;  3KJM A;  2VFU A;  1E0Y A;  1W1K A;  4DNS A;  1W1R A;  4HG0 A;  1N62 C;  5HMR A;  1AHZ A;  4PZF A;  2NQW A;  4BBY A;  2VFV A;  4ML8 A;  2YVS A;  3B9J B;  3FW7 A;  2Q4W A;  3I99 A;  5FXF A;  3LLB A;  3BW7 A;  3HRD C;  1MBB A;  1N61 C;  1E8F A;  1N5W C;  1W1O A;  3NVZ B;  2QKN A;  4OAL A;  3S1E A;  2P3H A;  1AHU A;  2E3T A;  1JRO A;  2BVH A;  4MLA A;  3C0P A;  1AHV A;  3FWA A;  2PLI A;  3FW9 A;  4PVJ A;  3S1F A;  3PM9 A;  5AE3 A;  1UXY A;  1VAO A;  3NS1 B;  1I19 A;  3ETR B;  5HHZ A;  3D2D A;  1N63 C;  5HQX A;  2P4P A;  1DII A;  3DQ0 A;  2VFR A;  1QLT A;  2W55 A;  3SR6 B;  4ZOH B;  2R8D A;  1FFV C;  1QLU A; 
#chains in the Genus database with same CATH topology
 1T3Q C;  5FXE A;  3RJA A;  1SB3 B;  3W8X A;  1FO4 A;  2BVF A;  1ZXI C;  1N60 C;  3NRZ B;  5I1W A;  1DZN A;  2AXR A;  1MBT A;  5AE1 A;  4UD8 A;  1W1Q A;  3AM9 A;  4PVH A;  2VAO A;  2GQT A;  3NVW B;  2O3G A;  1RM6 B;  3NVY B;  2IPI A;  4BCA A;  3NVV B;  5FXD A;  1FIQ B;  2QPM A;  3AN1 A;  3GSY A;  1WVE A;  3VTE A;  2OAI A;  2I0K A;  1W1M A;  4BC9 A;  5ADZ A;  3S1C A;  2R2Z A;  1V97 A;  3FW8 A;  4PVE A;  2VFS A;  1W1S A;  1F0X A;  2Y3S A;  1ZR6 A;  2Q85 A;  3HSU A;  5L6G A;  2W3R A;  2MBR A;  3W8Z A;  5AWV A;  4PWB A;  4PWC A;  1FFU C;  3EUB 3;  5D79 A;  5G5H B;  4O95 A;  3EJD B;  2UUV A;  3TSJ A;  1N5X A;  1W1L A;  2EXR A;  2BVG A;  4XLO A;  4PYT A;  5AE2 A;  5G5G B;  3PQB A;  3AMZ A;  4PVK A;  3D2J A;  1VDV A;  4JB1 A;  1W1J A;  2W3S A;  3LAE A;  2RK5 A;  3W8W A;  3TX1 A;  1E8H A;  3DED A;  4BC7 A;  5FXP A;  3POP A;  1WYG A;  4EC3 A;  3S1D A;  2UUU A;  1E8G A;  4JAY A;  2W54 A;  3TSH A;  2P13 A;  2PLS A;  2Y3R A;  1DIQ A;  2Y08 A;  3D2H A;  2GQU A;  3JS8 A;  5K8E A;  1WVF A;  1HSK A;  1JRP A;  2VFT A;  3KJM A;  2VFU A;  1E0Y A;  1W1K A;  4DNS A;  1W1R A;  4HG0 A;  1N62 C;  5HMR A;  3EJE B;  1AHZ A;  3RJ8 A;  4PZF A;  2NQW A;  4BBY A;  2VFV A;  4ML8 A;  2YVS A;  3B9J B;  3FW7 A;  2Q4W A;  3I99 A;  5FXF A;  3LLB A;  3BW7 A;  3HRD C;  1MBB A;  1N61 C;  1E8F A;  1N5W C;  1W1O A;  3NVZ B;  2QKN A;  4OAL A;  3S1E A;  2P3H A;  1AHU A;  2E3T A;  1JRO A;  2BVH A;  4MLA A;  3C0P A;  1AHV A;  3FWA A;  2PLI A;  3FW9 A;  4PVJ A;  3S1F A;  5L6F A;  3PM9 A;  5AE3 A;  1UXY A;  1VAO A;  3NS1 B;  3ETR B;  1I19 A;  5HHZ A;  3D2D A;  1N63 C;  3EJB B;  2WDW A;  5HQX A;  5I1V A;  2P4P A;  1DII A;  3DQ0 A;  2VFR A;  1QLT A;  2W55 A;  3SR6 B;  4ZOH B;  2R8D A;  1FFV C;  2Y4G A;  1QLU A; 
#chains in the Genus database with same CATH homology
 1T3Q C;  5FXE A;  3RJA A;  1SB3 B;  3W8X A;  1FO4 A;  2BVF A;  1ZXI C;  1N60 C;  3NRZ B;  5I1W A;  1DZN A;  2AXR A;  1MBT A;  5AE1 A;  4UD8 A;  1W1Q A;  3AM9 A;  4PVH A;  2VAO A;  2GQT A;  2O3G A;  3NVW B;  1RM6 B;  3NVY B;  2IPI A;  4BCA A;  5FXD A;  3NVV B;  1FIQ B;  2QPM A;  3AN1 A;  3GSY A;  1WVE A;  3VTE A;  2OAI A;  2I0K A;  1W1M A;  4BC9 A;  5ADZ A;  3S1C A;  2R2Z A;  1V97 A;  3FW8 A;  4PVE A;  2VFS A;  1W1S A;  1F0X A;  2Y3S A;  1ZR6 A;  2Q85 A;  3HSU A;  5L6G A;  2W3R A;  2MBR A;  3W8Z A;  5AWV A;  4PWB A;  4PWC A;  1FFU C;  3EUB 3;  5D79 A;  5G5H B;  4O95 A;  2UUV A;  3TSJ A;  1N5X A;  1W1L A;  2EXR A;  2BVG A;  4XLO A;  4PYT A;  5AE2 A;  5G5G B;  3PQB A;  3AMZ A;  4PVK A;  3D2J A;  1VDV A;  4JB1 A;  1W1J A;  2W3S A;  3LAE A;  2RK5 A;  3W8W A;  3TX1 A;  1E8H A;  3DED A;  4BC7 A;  5FXP A;  3POP A;  1WYG A;  4EC3 A;  3S1D A;  2UUU A;  1E8G A;  4JAY A;  2W54 A;  3TSH A;  2P13 A;  2PLS A;  2Y3R A;  1DIQ A;  2Y08 A;  3D2H A;  2GQU A;  3JS8 A;  5K8E A;  1WVF A;  1HSK A;  1JRP A;  2VFT A;  3KJM A;  2VFU A;  1E0Y A;  1W1K A;  4DNS A;  1W1R A;  4HG0 A;  1N62 C;  5HMR A;  1AHZ A;  3RJ8 A;  4PZF A;  2NQW A;  4BBY A;  2VFV A;  4ML8 A;  2YVS A;  3B9J B;  3FW7 A;  2Q4W A;  3I99 A;  5FXF A;  3LLB A;  3BW7 A;  3HRD C;  1MBB A;  1N61 C;  1E8F A;  1N5W C;  1W1O A;  3NVZ B;  2QKN A;  4OAL A;  3S1E A;  2P3H A;  1AHU A;  2E3T A;  1JRO A;  2BVH A;  4MLA A;  3C0P A;  1AHV A;  3FWA A;  2PLI A;  3FW9 A;  4PVJ A;  3S1F A;  5L6F A;  3PM9 A;  5AE3 A;  1UXY A;  1VAO A;  3NS1 B;  1I19 A;  3ETR B;  5HHZ A;  3D2D A;  1N63 C;  2WDW A;  5HQX A;  5I1V A;  2P4P A;  1DII A;  3DQ0 A;  2VFR A;  1QLT A;  2W55 A;  3SR6 B;  4ZOH B;  2R8D A;  1FFV C;  2Y4G A;  1QLU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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