3L86A

The crystal structure of smu.665 from streptococcus mutans ua159
Total Genus 77
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
77
sequence length
245
structure length
245
Chain Sequence
MKDIIVIKIGGVASQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLVGKNLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIGDNLLTGTLITAD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Streptococcus mutans
publication title The Crystal Structure of smu.665 from Streptococcus mutans UA159
rcsb
molecule keywords Acetylglutamate kinase
total genus 77
structure length 245
sequence length 245
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2009-12-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3l86A00
2BRIA 3QUNA 4NDQB 2WE4A 3T7BA 4AB7A 2AKOA 4I49A 2BNEA 4USJA 3D40A 3S6KA 3ZZFA 1GSJA 2OGXB 2AP9A 2IJ9A 2RD5A 4KZTA 2BUFA 1GS5A 3KZFA 4A7WA 2JI5A 4F6TA 3K56A 4NDPB 2A1FA 2BRXA 3LKKA 4OLCA 4NDRA 2BMUA 1Z9DA 1OHBA 2R98A 3D2MA 3D41A 4JZ9A 2J4JA 2JJ4A 4A7XA 3QURA 2BNDA 3QVHA 2J4LA 4JZ8A 2VA1A 4F6TB 2X2WA 4Q1TA 3K4YA 4JZ7A 3ZZHA 3D2PA 3QUOA 3EK5A 3QVFA 3C1NA 2CDQA 2V4YA 3EK6A 2HMFA 3C1MA 2J4KA 1E19A 3S6GA 2V5HA 3C20A 3WWMA 3K52A 2J0XA 2J0WA 4NDRB 2JJXA 2J5VA 4NDOA 3LL9A 3AAWA 3B8GA 3LL5A 4AXSA 2W21A 2WE5A 3NWYA 3U6UA 3TVIA 3S6HA 2WXBA 1B7BA 4NDQA 1YBDA 3L76A 1OHAA 2R8VA 2J5TA 3K4OA 2OGXA 3WWNA 3ZZIA 3ZZGA 4NDOB 2BNFA 3AB2A 2BTYA 3AB4A 3L86A 4NDPA 1OH9A 2E9YA
chains in the Genus database with same CATH superfamily
2BRIA 3QUNA 4NDQB 2WE4A 3T7BA 4AB7A 2AKOA 4I49A 2BNEA 4USJA 3D40A 3S6KA 3ZZFA 1GSJA 2OGXB 2AP9A 2IJ9A 2RD5A 4KZTA 2BUFA 1GS5A 3KZFA 4A7WA 2JI5A 4F6TA 3K56A 4NDPB 2A1FA 2BRXA 3LKKA 4OLCA 4NDRA 2BMUA 1Z9DA 1OHBA 2R98A 3D2MA 3D41A 4JZ9A 2J4JA 2JJ4A 4A7XA 3QURA 2BNDA 3QVHA 2J4LA 4JZ8A 2VA1A 4F6TB 2X2WA 4Q1TA 3K4YA 4JZ7A 3ZZHA 3D2PA 3QUOA 3EK5A 3QVFA 3C1NA 2CDQA 2V4YA 3EK6A 2HMFA 3C1MA 2J4KA 1E19A 3S6GA 2V5HA 3C20A 3WWMA 3K52A 2J0XA 2J0WA 4NDRB 2JJXA 2J5VA 4NDOA 3LL9A 3AAWA 3B8GA 3LL5A 4AXSA 2W21A 2WE5A 3NWYA 3U6UA 3TVIA 3S6HA 2WXBA 1B7BA 4NDQA 1YBDA 3L76A 1OHAA 2R8VA 2J5TA 3K4OA 2OGXA 3WWNA 3ZZIA 3ZZGA 4NDOB 2BNFA 3AB2A 2BTYA 3AB4A 3L86A 4NDPA 1OH9A 2E9YA
chains in the Genus database with same CATH topology
2BRIA 3QUNA 4NDQB 2WE4A 3T7BA 4AB7A 2AKOA 4I49A 2BNEA 4USJA 3D40A 3S6KA 3ZZFA 1GSJA 2OGXB 2AP9A 2IJ9A 2RD5A 4KZTA 2BUFA 1GS5A 3KZFA 4A7WA 2JI5A 4F6TA 3K56A 4NDPB 2A1FA 2BRXA 3LKKA 4OLCA 4NDRA 2BMUA 1Z9DA 1OHBA 2R98A 3D2MA 3D41A 4JZ9A 2J4JA 2JJ4A 4A7XA 3QURA 2BNDA 3QVHA 2J4LA 4JZ8A 2VA1A 4F6TB 2X2WA 4Q1TA 3K4YA 4JZ7A 3ZZHA 3D2PA 3QUOA 3EK5A 3QVFA 3C1NA 2CDQA 2V4YA 3EK6A 2HMFA 3C1MA 2J4KA 1E19A 3S6GA 2V5HA 3C20A 3WWMA 3K52A 2J0XA 2J0WA 4NDRB 2JJXA 2J5VA 4NDOA 3LL9A 3AAWA 3B8GA 3LL5A 4AXSA 2W21A 2WE5A 3NWYA 3U6UA 3TVIA 3S6HA 2WXBA 1B7BA 4NDQA 1YBDA 3L76A 1OHAA 2R8VA 2J5TA 3K4OA 2OGXA 3WWNA 3ZZIA 3ZZGA 4NDOB 2BNFA 3AB2A 2BTYA 3AB4A 3L86A 4NDPA 1OH9A 2E9YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BRI A;  3QUN A;  4NDQ B;  2WE4 A;  3T7B A;  4AB7 A;  2AKO A;  4I49 A;  2BNE A;  4USJ A;  3D40 A;  3S6K A;  3ZZF A;  1GSJ A;  2OGX B;  2AP9 A;  2IJ9 A;  2RD5 A;  4KZT A;  2BUF A;  1GS5 A;  3KZF A;  4A7W A;  2JI5 A;  4F6T A;  3K56 A;  4NDP B;  2A1F A;  2BRX A;  3LKK A;  4OLC A;  4NDR A;  2BMU A;  1Z9D A;  1OHB A;  2R98 A;  3D2M A;  3D41 A;  4JZ9 A;  2J4J A;  2JJ4 A;  4A7X A;  3QUR A;  2BND A;  3QVH A;  2J4L A;  4JZ8 A;  2VA1 A;  4F6T B;  2X2W A;  4Q1T A;  3K4Y A;  4JZ7 A;  3ZZH A;  3D2P A;  3QUO A;  3EK5 A;  3QVF A;  3C1N A;  2CDQ A;  2V4Y A;  3EK6 A;  2HMF A;  3C1M A;  2J4K A;  1E19 A;  3S6G A;  2V5H A;  3C20 A;  3WWM A;  3K52 A;  2J0X A;  2J0W A;  4NDR B;  2JJX A;  2J5V A;  4NDO A;  3LL9 A;  3AAW A;  3B8G A;  3LL5 A;  4AXS A;  2W21 A;  2WE5 A;  3NWY A;  3U6U A;  3TVI A;  3S6H A;  2WXB A;  1B7B A;  4NDQ A;  1YBD A;  3L76 A;  1OHA A;  2R8V A;  2J5T A;  3K4O A;  2OGX A;  3WWN A;  3ZZI A;  3ZZG A;  4NDO B;  2BNF A;  3AB2 A;  2BTY A;  3AB4 A;  3L86 A;  4NDP A;  1OH9 A;  2E9Y A; 
#chains in the Genus database with same CATH topology
 2BRI A;  3QUN A;  4NDQ B;  2WE4 A;  3T7B A;  4AB7 A;  2AKO A;  4I49 A;  2BNE A;  4USJ A;  3D40 A;  3S6K A;  3ZZF A;  1GSJ A;  2OGX B;  2AP9 A;  2IJ9 A;  2RD5 A;  4KZT A;  2BUF A;  1GS5 A;  3KZF A;  4A7W A;  2JI5 A;  4F6T A;  3K56 A;  4NDP B;  2A1F A;  2BRX A;  3LKK A;  4OLC A;  4NDR A;  2BMU A;  1Z9D A;  1OHB A;  2R98 A;  3D2M A;  3D41 A;  4JZ9 A;  2J4J A;  2JJ4 A;  4A7X A;  3QUR A;  2BND A;  3QVH A;  2J4L A;  4JZ8 A;  2VA1 A;  4F6T B;  2X2W A;  4Q1T A;  3K4Y A;  4JZ7 A;  3ZZH A;  3D2P A;  3QUO A;  3EK5 A;  3QVF A;  3C1N A;  2CDQ A;  2V4Y A;  3EK6 A;  2HMF A;  3C1M A;  2J4K A;  1E19 A;  3S6G A;  2V5H A;  3C20 A;  3WWM A;  3K52 A;  2J0X A;  2J0W A;  4NDR B;  2JJX A;  2J5V A;  4NDO A;  3LL9 A;  3AAW A;  3B8G A;  3LL5 A;  4AXS A;  2W21 A;  2WE5 A;  3NWY A;  3U6U A;  3TVI A;  3S6H A;  2WXB A;  1B7B A;  4NDQ A;  1YBD A;  3L76 A;  1OHA A;  2R8V A;  2J5T A;  3K4O A;  2OGX A;  3WWN A;  3ZZI A;  3ZZG A;  4NDO B;  2BNF A;  3AB2 A;  2BTY A;  3AB4 A;  3L86 A;  4NDP A;  1OH9 A;  2E9Y A; 
#chains in the Genus database with same CATH homology
 2BRI A;  3QUN A;  4NDQ B;  2WE4 A;  3T7B A;  4AB7 A;  2AKO A;  4I49 A;  2BNE A;  4USJ A;  3D40 A;  3S6K A;  3ZZF A;  1GSJ A;  2OGX B;  2AP9 A;  2IJ9 A;  2RD5 A;  4KZT A;  2BUF A;  1GS5 A;  3KZF A;  4A7W A;  2JI5 A;  4F6T A;  3K56 A;  4NDP B;  2A1F A;  2BRX A;  3LKK A;  4OLC A;  4NDR A;  2BMU A;  1Z9D A;  1OHB A;  2R98 A;  3D2M A;  3D41 A;  4JZ9 A;  2J4J A;  2JJ4 A;  4A7X A;  3QUR A;  2BND A;  3QVH A;  2J4L A;  4JZ8 A;  2VA1 A;  4F6T B;  2X2W A;  4Q1T A;  3K4Y A;  4JZ7 A;  3ZZH A;  3D2P A;  3QUO A;  3EK5 A;  3QVF A;  3C1N A;  2CDQ A;  2V4Y A;  3EK6 A;  2HMF A;  3C1M A;  2J4K A;  1E19 A;  3S6G A;  2V5H A;  3C20 A;  3WWM A;  3K52 A;  2J0X A;  2J0W A;  4NDR B;  2JJX A;  2J5V A;  4NDO A;  3LL9 A;  3AAW A;  3B8G A;  3LL5 A;  4AXS A;  2W21 A;  2WE5 A;  3NWY A;  3U6U A;  3TVI A;  3S6H A;  2WXB A;  1B7B A;  4NDQ A;  1YBD A;  3L76 A;  1OHA A;  2R8V A;  2J5T A;  3K4O A;  2OGX A;  3WWN A;  3ZZI A;  3ZZG A;  4NDO B;  2BNF A;  3AB2 A;  2BTY A;  3AB4 A;  3L86 A;  4NDP A;  1OH9 A;  2E9Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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