The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
18
|
sequence length |
74
|
structure length |
74
|
Chain Sequence |
NECVSKGFGCLPQSDCPQEARLSYGGCSTVCCDLSKLTGCKGKGGECNPLDRQCKELQAESASCGKGQKCCVWL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Insights into the molecular inactivation mechanism of human activated thrombin-activatable fibrinolysis inhibitor
pubmed doi rcsb |
| molecule tags |
Hydrolase/hydrolase inhibitor
|
| source organism |
Rhipicephalus bursa
|
| molecule keywords |
Carboxypeptidase B2
|
| total genus |
18
|
| structure length |
74
|
| sequence length |
74
|
| ec nomenclature | |
| pdb deposition date | 2010-02-01 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Single Sheet | Anthopleurin-A | Anthopleurin-A | ||
| Mainly Beta | Single Sheet | Anthopleurin-A | Anthopleurin-A |
#chains in the Genus database with same CATH superfamily 3D4U B; 1ZLH B; 2BDS A; 1SHI A; 1WQK A; 1APF A; 1AHL A; 1BDS A; 3LMS B; 2SH1 A; 4GV5 A; 1H5O A; 2K2X A; 1ZUE A; 1WXN A; 1B8W A; 2MN3 A; 2RNG A; 1D6B A; 1Z99 A; 1ZLI B; 2H9X A; 1ZUF A; 1SH1 A; 2JTO A; 1ATX A; 2MUB A; #chains in the Genus database with same CATH topology 3D4U B; 1ZLH B; 3C38 A; 3KEZ A; 2BDS A; 1SHI A; 1WQK A; 4YIR A; 1APF A; 1AHL A; 1EL6 A; 1BDS A; 3LMS B; 2SH1 A; 3C30 A; 2XXL A; 2QSF A; 2QSG A; 4GV5 A; 1H5O A; 2K2X A; 3IF4 A; 2QSH A; 1GKU B; 1ZUE A; 2IKD A; 3MYV A; 2IKE A; 2HJ9 C; 1ZHH B; 2JR3 A; 1WXN A; 1B8W A; 2HJE A; 2MN3 A; 2DLA A; 2RNG A; 1D6B A; 1Z99 A; 1ZLI B; 2B9K A; 2H9X A; 1ZUF A; 1SH1 A; 2JTO A; 3MCX A; 1GL9 B; 1ATX A; 2MUB A; #chains in the Genus database with same CATH homology 3D4U B; 1ZLH B; 3C38 A; 3KEZ A; 2BDS A; 1SHI A; 1WQK A; 4YIR A; 1APF A; 1AHL A; 1BDS A; 3LMS B; 2SH1 A; 3C30 A; 2XXL A; 2QSF A; 2QSG A; 4GV5 A; 1H5O A; 2K2X A; 2QSH A; 1ZUE A; 2IKD A; 3MYV A; 2IKE A; 2HJ9 C; 1ZHH B; 2JR3 A; 1WXN A; 1B8W A; 2HJE A; 2MN3 A; 2DLA A; 2RNG A; 1D6B A; 1Z99 A; 1ZLI B; 2B9K A; 2H9X A; 1ZUF A; 1SH1 A; 2JTO A; 3MCX A; 1ATX A; 2MUB A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
