3LVJC

Crystal structure of e.coli iscs-tusa complex (form 1)
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
77
structure length
77
Chain Sequence
LFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Cysteine desulfurase
publication title Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions.
pubmed doi rcsb
source organism Escherichia coli
total genus 23
structure length 77
sequence length 77
chains with identical sequence D
ec nomenclature
pdb deposition date 2010-02-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01206 TusA Sulfurtransferase TusA
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.110.40 Alpha Beta 2-Layer Sandwich Translation Initiation Factor IF3 TusA-like domain 3lvjC00
1DCJA 1PAVA 3LVKB 1JE3A 1JDQA 3HZ7A 3LVJC 2LXRA
chains in the Genus database with same CATH superfamily
2Q3VA 2LN3A 3T1IA 4HVCA 1H4SA 1NFHA 2H9UA 4FBWA 4EO0A 3IABA 1S8EA 1Y2IA 3TOEA 4FBKA 2A2YA 3TTCA 4K87A 1NJ5A 3DSDA 4WI1A 4Z9EA 1NJ6A 2M71A 1H0YA 3LVJC 4OLFA 1TIGA 4FCXA 2EH1A 1H0XA 3TTDA 3U6YA 1NJ2A 4NZRM 1H4TA 1NJ8A 3TSQA 1JE3A 2Y1BA 4NZTM 3TSPA 4FBQA 2CRQA 1XEZA 1VM0A 4YKEA 1JO0A 1II7A 1JDQA 3LVKB 1H4QA 4YDQA 1NFJA 2IFEA 3ZIGA 4HVZA 1NH9A 2GTCA 4HD0A 1NJ1A 1DCJA 4TWAA 4NCXA 3P04A 4Q15A 1RQ8A 3WBMA 3TSUA 3TTFA 3ZIHA 1Y9XA 1HC7A 2BKYX 3VTIA 1VR4A 1PAVA 2P9BA 3DSCA 2Z7CA 3IALA 4K86A 3VTHA 4K88A 1LN4A 1UDVA 3QKBA 2EK0A 2L8YA 2LXRA 3ZIIA 3IABB 3HZ7A 3ZIEA
chains in the Genus database with same CATH topology
1DCJA 1PAVA 3LVKB 1JE3A 1JDQA 3HZ7A 3LVJC 2LXRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DCJ A;  1PAV A;  3LVK B;  1JE3 A;  1JDQ A;  3HZ7 A;  3LVJ C;  2LXR A; 
#chains in the Genus database with same CATH topology
 2Q3V A;  2LN3 A;  3T1I A;  4HVC A;  1H4S A;  1NFH A;  2H9U A;  4FBW A;  4EO0 A;  3IAB A;  1S8E A;  1Y2I A;  3TOE A;  4FBK A;  2A2Y A;  3TTC A;  4K87 A;  1NJ5 A;  3DSD A;  4WI1 A;  4Z9E A;  1NJ6 A;  2M71 A;  1H0Y A;  3LVJ C;  4OLF A;  1TIG A;  4FCX A;  2EH1 A;  1H0X A;  3TTD A;  3U6Y A;  1NJ2 A;  4NZR M;  1H4T A;  1NJ8 A;  3TSQ A;  1JE3 A;  2Y1B A;  4NZT M;  3TSP A;  4FBQ A;  2CRQ A;  1XEZ A;  1VM0 A;  4YKE A;  1JO0 A;  1II7 A;  1JDQ A;  3LVK B;  1H4Q A;  4YDQ A;  1NFJ A;  2IFE A;  3ZIG A;  4HVZ A;  1NH9 A;  2GTC A;  4HD0 A;  1NJ1 A;  1DCJ A;  4TWA A;  4NCX A;  3P04 A;  4Q15 A;  1RQ8 A;  3WBM A;  3TSU A;  3TTF A;  3ZIH A;  1Y9X A;  1HC7 A;  2BKY X;  3VTI A;  1VR4 A;  1PAV A;  2P9B A;  3DSC A;  2Z7C A;  3IAL A;  4K86 A;  3VTH A;  4K88 A;  1LN4 A;  1UDV A;  3QKB A;  2EK0 A;  2L8Y A;  2LXR A;  3ZII A;  3IAB B;  3HZ7 A;  3ZIE A; 
#chains in the Genus database with same CATH homology
 1DCJ A;  1PAV A;  3LVK B;  1JE3 A;  1JDQ A;  3HZ7 A;  3LVJ C;  2LXR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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