3M5BA

Crystal structure of the btb domain from fazf/zbtb32
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
109
structure length
109
Chain Sequence
PIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQWALGEGISPSTFAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
source organism Homo sapiens
publication title Insights into Strand Exchange in BTB Domain Dimers from the Crystal Structures of FAZF and Miz1.
pubmed doi rcsb
molecule keywords Zinc finger and BTB domain-containing protein 32
total genus 30
structure length 109
sequence length 109
chains with identical sequence B
ec nomenclature
pdb deposition date 2010-03-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00651 BTB BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 3m5bA00
4W9IB 4JTAB 3V7DA 5FTAA 3M52A 1NN7A 4W9HH 3C6NA 5EUPA 4BKSB 4W9LB 5A6RA 4AP2A 4UYIA 4W9CB 4B9KB 5H7HA 5H7GA 3WSOB 3ZNGB 2PPIA 1CS3A 3E4UA 1FS1B 2R9RB 1T1DA 2OVQA 3ZUNB 2P1NA 2YY9A 2P1MA 1S1GA 1FS2B 2Z8HA 2MA9C 4HXIA 2P1OA 3OGKA 3M4TA 3M8VA 4J8ZA 2ASSA 4EOZA 4AWJB 1QDVA 4U2MA 1EODA 1EOFA 3M5BA 4JTCB 4U2NA 4WQOC 4CRHA 3L2OA 3C6OA 2ASTA 2IF5A 2Q81A 3ZTDB 3DRZA 3FKCA 4CXIA 1DSXA 5BO4C 3LBZA 4N9F5 1NEXA 4W9GB 3DCGB 3HVEB 4JGHC 1QDWA 4U77A 4ZOUA 3ZRFB 4W9HB 4CP3A 3C6PA 3LUTB 1LM8C 2P1QA 1LDKD 4APFA 4BKTB 3OHUA 3ZRCB 5BXHA 3MKSA 1A68A 4B9KE 3HU6A 4CXTA 5BXBA 3LNMB 1LQBB 2IZVC 4BGCA 4B95B 2C9WC 2E32B 3OGMA 1VCBB 2FNJC 2VKPA 1R29A 3OGLA 1R28A 2P1PA 2OVRA 3HVEA 2I2RA 3KVTA 2IHCA 3HQIA 4CXJA 2VPKA 1EOEA 3ZTCB 5LLIB 5JH5B 3I3NA 1R2BA 2NZ0B 3GA1A 4W9EB 4W9JB 2E31B 3HTMA 3B84A 1P22B 4UIJA 2JZ3C 3ZKJB 2NN2A 3OHVA 5IBKA 4W9KB 1HV2A 2A79B 5DAFA 5DADA 4W9DB 3BIMA 5HYWB 4AJYC 1BUOA 2OVPA 4JTDB 5HZGC 5BXDA 4I6JC 1EXBE 1FQVB 5A15A 4W9FB
chains in the Genus database with same CATH superfamily
4W9IB 4JTAB 3V7DA 5FTAA 3M52A 1NN7A 4W9HH 3C6NA 5EUPA 4BKSB 4W9LB 3DRXA 5A6RA 4UYIA 4AP2A 4W9CB 4B9KB 5H7HA 5H7GA 3WSOB 3ZNGB 2PPIA 1CS3A 3E4UA 1FS1B 2R9RB 1T1DA 2OVQA 3ZUNB 2P1NA 2YY9A 2P1MA 1S1GA 1FS2B 2Z8HA 2MA9C 4HXIA 2P1OA 3OGKA 3M4TA 3M8VA 4J8ZA 2ASSA 4EOZA 4AWJB 1QDVA 4U2MA 1EODA 1EOFA 3M5BA 4JTCB 4U2NA 4WQOC 4CRHA 3L2OA 3C6OA 3DRYA 2ASTA 2IF5A 2Q81A 3ZTDB 3DRZA 3FKCA 4CXIA 1DSXA 5BO4C 3LBZA 4N9F5 1NEXA 4W9GB 3DCGB 3HVEB 4JGHC 1QDWA 4U77A 4ZOUA 3ZRFB 4W9HB 4CP3A 3C6PA 3LUTB 1LM8C 2P1QA 1LDKD 4APFA 4BKTB 3OHUA 3ZRCB 5BXHA 3MKSA 1A68A 4B9KE 3HU6A 4CXTA 5BXBA 4YY8A 3LNMB 1LQBB 2IZVC 4BGCA 4B95B 2C9WC 2E32B 3OGMA 1VCBB 2FNJC 2VKPA 1R29A 3OGLA 1R28A 2P1PA 2OVRA 3HVEA 2I2RA 3KVTA 2IHCA 3HQIA 4CXJA 2VPKA 1EOEA 3ZTCB 5LLIB 5JH5B 3I3NA 1R2BA 2NZ0B 3GA1A 4W9EB 4W9JB 4ZGCA 2E31B 3HTMA 3B84A 1P22B 4UIJA 2JZ3C 3ZKJB 2NN2A 3OHVA 5IBKA 4W9KB 1HV2A 2A79B 5DAFA 5DADA 4W9DB 3BIMA 5HYWB 4AJYC 1BUOA 2OVPA 4JTDB 5HZGC 5BXDA 4I6JC 1EXBE 1FQVB 5A15A 4W9FB
chains in the Genus database with same CATH topology
4W9IB 4JTAB 3V7DA 5FTAA 3M52A 1NN7A 4W9HH 3C6NA 5EUPA 4BKSB 4W9LB 3DRXA 5A6RA 4UYIA 4AP2A 4W9CB 4B9KB 5H7HA 5H7GA 3WSOB 3ZNGB 2PPIA 1CS3A 3E4UA 1FS1B 2R9RB 1T1DA 2OVQA 3ZUNB 2P1NA 2YY9A 2P1MA 1S1GA 1FS2B 2Z8HA 2MA9C 4HXIA 2P1OA 3OGKA 3M4TA 3M8VA 4J8ZA 2ASSA 4EOZA 4AWJB 1QDVA 4U2MA 1EODA 1EOFA 3M5BA 4JTCB 4U2NA 4WQOC 4CRHA 3L2OA 3C6OA 3DRYA 2ASTA 2IF5A 2Q81A 3ZTDB 3DRZA 3FKCA 4CXIA 1DSXA 5BO4C 3LBZA 4N9F5 1NEXA 4W9GB 3DCGB 3HVEB 4JGHC 1QDWA 4U77A 4ZOUA 3ZRFB 4W9HB 4CP3A 3C6PA 3LUTB 1LM8C 2P1QA 1LDKD 4APFA 4BKTB 3OHUA 3ZRCB 5BXHA 3MKSA 1A68A 4B9KE 3HU6A 4CXTA 5BXBA 4YY8A 3LNMB 1LQBB 2IZVC 4BGCA 4B95B 2C9WC 2E32B 3OGMA 1VCBB 2FNJC 2VKPA 1R29A 3OGLA 1R28A 2P1PA 2OVRA 3HVEA 2I2RA 3KVTA 2IHCA 3HQIA 4CXJA 2VPKA 1EOEA 3ZTCB 5LLIB 5JH5B 3I3NA 1R2BA 2NZ0B 3GA1A 4W9EB 4W9JB 4ZGCA 2E31B 3HTMA 3B84A 1P22B 4UIJA 2JZ3C 3ZKJB 2NN2A 3OHVA 5IBKA 4W9KB 1HV2A 2A79B 5DAFA 5DADA 4W9DB 3BIMA 5HYWB 4AJYC 1BUOA 2OVPA 4JTDB 5HZGC 5BXDA 4I6JC 1EXBE 1FQVB 5A15A 4W9FB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4W9I B;  4JTA B;  3V7D A;  5FTA A;  3M52 A;  1NN7 A;  4W9H H;  3C6N A;  5EUP A;  4BKS B;  4W9L B;  5A6R A;  4AP2 A;  4UYI A;  4W9C B;  4B9K B;  5H7H A;  5H7G A;  3WSO B;  3ZNG B;  2PPI A;  1CS3 A;  3E4U A;  1FS1 B;  2R9R B;  1T1D A;  2OVQ A;  3ZUN B;  2P1N A;  2YY9 A;  2P1M A;  1S1G A;  1FS2 B;  2Z8H A;  2MA9 C;  4HXI A;  2P1O A;  3OGK A;  3M4T A;  3M8V A;  4J8Z A;  2ASS A;  4EOZ A;  4AWJ B;  1QDV A;  4U2M A;  1EOD A;  1EOF A;  3M5B A;  4JTC B;  4U2N A;  4WQO C;  4CRH A;  3L2O A;  3C6O A;  2AST A;  2IF5 A;  2Q81 A;  3ZTD B;  3DRZ A;  3FKC A;  4CXI A;  1DSX A;  5BO4 C;  3LBZ A;  4N9F 5;  1NEX A;  4W9G B;  3DCG B;  3HVE B;  4JGH C;  1QDW A;  4U77 A;  4ZOU A;  3ZRF B;  4W9H B;  4CP3 A;  3C6P A;  3LUT B;  1LM8 C;  2P1Q A;  1LDK D;  4APF A;  4BKT B;  3OHU A;  3ZRC B;  5BXH A;  3MKS A;  1A68 A;  4B9K E;  3HU6 A;  4CXT A;  5BXB A;  3LNM B;  1LQB B;  2IZV C;  4BGC A;  4B95 B;  2C9W C;  2E32 B;  3OGM A;  1VCB B;  2FNJ C;  2VKP A;  1R29 A;  3OGL A;  1R28 A;  2P1P A;  2OVR A;  3HVE A;  2I2R A;  3KVT A;  2IHC A;  3HQI A;  4CXJ A;  2VPK A;  1EOE A;  3ZTC B;  5LLI B;  5JH5 B;  3I3N A;  1R2B A;  2NZ0 B;  3GA1 A;  4W9E B;  4W9J B;  2E31 B;  3HTM A;  3B84 A;  1P22 B;  4UIJ A;  2JZ3 C;  3ZKJ B;  2NN2 A;  3OHV A;  5IBK A;  4W9K B;  1HV2 A;  2A79 B;  5DAF A;  5DAD A;  4W9D B;  3BIM A;  5HYW B;  4AJY C;  1BUO A;  2OVP A;  4JTD B;  5HZG C;  5BXD A;  4I6J C;  1EXB E;  1FQV B;  5A15 A;  4W9F B; 
#chains in the Genus database with same CATH topology
 4W9I B;  4JTA B;  3V7D A;  5FTA A;  3M52 A;  1NN7 A;  4W9H H;  3C6N A;  5EUP A;  4BKS B;  4W9L B;  3DRX A;  5A6R A;  4UYI A;  4AP2 A;  4W9C B;  4B9K B;  5H7H A;  5H7G A;  3WSO B;  3ZNG B;  2PPI A;  1CS3 A;  3E4U A;  1FS1 B;  2R9R B;  1T1D A;  2OVQ A;  3ZUN B;  2P1N A;  2YY9 A;  2P1M A;  1S1G A;  1FS2 B;  2Z8H A;  2MA9 C;  4HXI A;  2P1O A;  3OGK A;  3M4T A;  3M8V A;  4J8Z A;  2ASS A;  4EOZ A;  4AWJ B;  1QDV A;  4U2M A;  1EOD A;  1EOF A;  3M5B A;  4JTC B;  4U2N A;  4WQO C;  4CRH A;  3L2O A;  3C6O A;  3DRY A;  2AST A;  2IF5 A;  2Q81 A;  3ZTD B;  3DRZ A;  3FKC A;  4CXI A;  1DSX A;  5BO4 C;  3LBZ A;  4N9F 5;  1NEX A;  4W9G B;  3DCG B;  3HVE B;  4JGH C;  1QDW A;  4U77 A;  4ZOU A;  3ZRF B;  4W9H B;  4CP3 A;  3C6P A;  3LUT B;  1LM8 C;  2P1Q A;  1LDK D;  4APF A;  4BKT B;  3OHU A;  3ZRC B;  5BXH A;  3MKS A;  1A68 A;  4B9K E;  3HU6 A;  4CXT A;  5BXB A;  4YY8 A;  3LNM B;  1LQB B;  2IZV C;  4BGC A;  4B95 B;  2C9W C;  2E32 B;  3OGM A;  1VCB B;  2FNJ C;  2VKP A;  1R29 A;  3OGL A;  1R28 A;  2P1P A;  2OVR A;  3HVE A;  2I2R A;  3KVT A;  2IHC A;  3HQI A;  4CXJ A;  2VPK A;  1EOE A;  3ZTC B;  5LLI B;  5JH5 B;  3I3N A;  1R2B A;  2NZ0 B;  3GA1 A;  4W9E B;  4W9J B;  4ZGC A;  2E31 B;  3HTM A;  3B84 A;  1P22 B;  4UIJ A;  2JZ3 C;  3ZKJ B;  2NN2 A;  3OHV A;  5IBK A;  4W9K B;  1HV2 A;  2A79 B;  5DAF A;  5DAD A;  4W9D B;  3BIM A;  5HYW B;  4AJY C;  1BUO A;  2OVP A;  4JTD B;  5HZG C;  5BXD A;  4I6J C;  1EXB E;  1FQV B;  5A15 A;  4W9F B; 
#chains in the Genus database with same CATH homology
 4W9I B;  4JTA B;  3V7D A;  5FTA A;  3M52 A;  1NN7 A;  4W9H H;  3C6N A;  5EUP A;  4BKS B;  4W9L B;  3DRX A;  5A6R A;  4UYI A;  4AP2 A;  4W9C B;  4B9K B;  5H7H A;  5H7G A;  3WSO B;  3ZNG B;  2PPI A;  1CS3 A;  3E4U A;  1FS1 B;  2R9R B;  1T1D A;  2OVQ A;  3ZUN B;  2P1N A;  2YY9 A;  2P1M A;  1S1G A;  1FS2 B;  2Z8H A;  2MA9 C;  4HXI A;  2P1O A;  3OGK A;  3M4T A;  3M8V A;  4J8Z A;  2ASS A;  4EOZ A;  4AWJ B;  1QDV A;  4U2M A;  1EOD A;  1EOF A;  3M5B A;  4JTC B;  4U2N A;  4WQO C;  4CRH A;  3L2O A;  3C6O A;  3DRY A;  2AST A;  2IF5 A;  2Q81 A;  3ZTD B;  3DRZ A;  3FKC A;  4CXI A;  1DSX A;  5BO4 C;  3LBZ A;  4N9F 5;  1NEX A;  4W9G B;  3DCG B;  3HVE B;  4JGH C;  1QDW A;  4U77 A;  4ZOU A;  3ZRF B;  4W9H B;  4CP3 A;  3C6P A;  3LUT B;  1LM8 C;  2P1Q A;  1LDK D;  4APF A;  4BKT B;  3OHU A;  3ZRC B;  5BXH A;  3MKS A;  1A68 A;  4B9K E;  3HU6 A;  4CXT A;  5BXB A;  4YY8 A;  3LNM B;  1LQB B;  2IZV C;  4BGC A;  4B95 B;  2C9W C;  2E32 B;  3OGM A;  1VCB B;  2FNJ C;  2VKP A;  1R29 A;  3OGL A;  1R28 A;  2P1P A;  2OVR A;  3HVE A;  2I2R A;  3KVT A;  2IHC A;  3HQI A;  4CXJ A;  2VPK A;  1EOE A;  3ZTC B;  5LLI B;  5JH5 B;  3I3N A;  1R2B A;  2NZ0 B;  3GA1 A;  4W9E B;  4W9J B;  4ZGC A;  2E31 B;  3HTM A;  3B84 A;  1P22 B;  4UIJ A;  2JZ3 C;  3ZKJ B;  2NN2 A;  3OHV A;  5IBK A;  4W9K B;  1HV2 A;  2A79 B;  5DAF A;  5DAD A;  4W9D B;  3BIM A;  5HYW B;  4AJY C;  1BUO A;  2OVP A;  4JTD B;  5HZG C;  5BXD A;  4I6J C;  1EXB E;  1FQV B;  5A15 A;  4W9F B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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