3M9GA

Crystal structure of the three-pasta-domain of a ser/thr kinase from staphylococcus aureus
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
201
structure length
201
Chain Sequence
YEETPDVIGKSVKEAEQIFNKNNLKLGKISRSYSDKYPENEIIKTTPNTGERVERGDSVDVVISKGPEKVKMPNVIGLPKEEALQKLKSLGLKDVTIEKVYNNQAPKGYIANQSVTANTEIAIHDSNIKLYESLGIKQVYVEDFEHKSFSKAKKALEEKGFKVESKEEYSDDIDEGDVISQSPKGKSVDEGSTISFVVSKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Protein kinase
publication title The Extended Conformation of the 2.9-A Crystal Structure of the Three-PASTA Domain of a Ser/Thr Kinase from the Human Pathogen Staphylococcus aureus
pubmed doi rcsb
source organism Staphylococcus aureus
total genus 41
structure length 201
sequence length 201
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 2010-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03793 PASTA PASTA domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.10.20 Alpha Beta 2-Layer Sandwich Trypsin Inhibitor V; Chain A Trypsin Inhibitor V; Chain A 3m9gA02
3.30.10.20 Alpha Beta 2-Layer Sandwich Trypsin Inhibitor V; Chain A Trypsin Inhibitor V; Chain A 3m9gA01
3.30.10.20 Alpha Beta 2-Layer Sandwich Trypsin Inhibitor V; Chain A Trypsin Inhibitor V; Chain A 3m9gA03
2KUFA 5E10A 2KUIA 3M9GA 3PY9A 2KUEA 3OUVA 5E0YA 5E0ZA 2MGVA 2KUDA
chains in the Genus database with same CATH superfamily
1TECI 1Y3DI 1YPBI 1TINA 1Y4AI 3CI2A 1SIBI 1Y34I 4B2CB 4H4FB 1TO1I 1TM7I 1LW6I 1TMGI 1TO2I 1COAI 1Y48I 3TECI 2TECI 2KUFA 1YPCI 5E10A 1CISA 1DWMA 1TM5I 2KUEA 5E0YA 5E0ZA 1TM1I 1Y4DI 1Y33I 3W0EA 5FFNI 1YPAI 2SECI 2KUIA 3M9GA 3RDZC 4B1TB 1Y3BI 1EGLA 1Y3FI 1HYMA 3OUVA 1TM4I 2KUDA 2MGVA 3PY9A 2SNII 1VBWA 1CSEI 1Y1KI 3W0DA 1TM3I 1Y3CI 4B2AB 1SBNI 5FBZB 3RDYA 4B2BB 1MEEI 1ACBI 2CI2I 1MITA
chains in the Genus database with same CATH topology
2KUFA 5E10A 2KUIA 3M9GA 3PY9A 2KUEA 3OUVA 5E0YA 5E0ZA 2MGVA 2KUDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KUF A;  5E10 A;  2KUI A;  3M9G A;  3PY9 A;  2KUE A;  3OUV A;  5E0Y A;  5E0Z A;  2MGV A;  2KUD A; 
#chains in the Genus database with same CATH topology
 1TEC I;  1Y3D I;  1YPB I;  1TIN A;  1Y4A I;  3CI2 A;  1SIB I;  1Y34 I;  4B2C B;  4H4F B;  1TO1 I;  1TM7 I;  1LW6 I;  1TMG I;  1TO2 I;  1COA I;  1Y48 I;  3TEC I;  2TEC I;  2KUF A;  1YPC I;  5E10 A;  1CIS A;  1DWM A;  1TM5 I;  2KUE A;  5E0Y A;  5E0Z A;  1TM1 I;  1Y4D I;  1Y33 I;  3W0E A;  5FFN I;  1YPA I;  2SEC I;  2KUI A;  3M9G A;  3RDZ C;  4B1T B;  1Y3B I;  1EGL A;  1Y3F I;  1HYM A;  3OUV A;  1TM4 I;  2KUD A;  2MGV A;  3PY9 A;  2SNI I;  1VBW A;  1CSE I;  1Y1K I;  3W0D A;  1TM3 I;  1Y3C I;  4B2A B;  1SBN I;  5FBZ B;  3RDY A;  4B2B B;  1MEE I;  1ACB I;  2CI2 I;  1MIT A; 
#chains in the Genus database with same CATH homology
 2KUF A;  5E10 A;  2KUI A;  3M9G A;  3PY9 A;  2KUE A;  3OUV A;  5E0Y A;  5E0Z A;  2MGV A;  2KUD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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