3MMRA

Structure of plasmodium falciparum arginase in complex with abh
Total Genus 118
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
118
sequence length
390
structure length
308
Chain Sequence
KNVSIIGSPLAAGQPLGGVQLACDDLRKLGLHNVIDVLGWKYEDIGNIDNCYYDNIRNIKEIGIFSKNLFDTMSNELRKKNFVLNIGGDHGVAFSSILSSLQMYQNLRVIWIDAHGDINIPETSPSGNYHGMTLAHTLGLFKKKVPYFEWSENLTYLKPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICTALEKIDPNSNCPIHISLDIDSVDNVFAPGTGTVAKGGLNYREINLLMKILAETKRVVSMDLVEYNPSLDEVDKKVHGDSLPILDNATKTGKLCLELIARVLGYDIV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Arginase
publication title Crystal structure of arginase from Plasmodium falciparum and implications for L-arginine depletion in malarial infection .
pubmed doi rcsb
source organism Plasmodium falciparum 3d7
total genus 118
structure length 308
sequence length 390
ec nomenclature ec 3.5.3.1: Arginase.
pdb deposition date 2010-04-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00491 Arginase Arginase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.800.10 Alpha Beta 3-Layer(aba) Sandwich Arginase; Chain A Ureohydrolase domain 3mmrA00
1P8PA 3NIPA 1RLAA 1T4PA 1T4RA 1WOGA 3THHA 4CEVA 4FCKA 1P8SA 3E9BA 1P8MA 1WVAA 4Q3SA 4I06A 1ZPGA 1R1OA 2AEBA 3LHLA 1P8NA 1WVBA 4GSVA 4GWCA 4IE1A 3TF3A 1T4SA 4Q3QA 2A0MA 3M1RA 4GWDA 4MYFA 2CEVA 4IE3A 3LP4A 3MFVA 4DZ4A 3E6KA 5RLAA 3GMZA 1P8OA 4RHKA 1WOHA 3E8QA 4ITYA 4RHMA 1XFKA 3F80A 4HXQA 1T5GA 4MYKA 1P8QA 1GQ6A 2PLLA 3LP7A 1HQ5A 3THJA 4Q41A 4G3HA 2PHOA 1T5FA 3SL1A 4GSMA 3RLAA 4RHLA 3MFWA 3MJLA 2EF5A 1HQHA 3GN0A 2ZAVA 3MMRA 4IU4A 4FCIA 1HQFA 3E8ZA 4IE2A 5HJ9A 1TA1A 4Q42A 1TBHA 1ZPEA 3CEVA 4RHIA 2PHAA 1GQ7A 4IXUA 1P8RA 3KV2A 1D3VA 2EF4A 4Q3TA 1CEVA 1HQXA 4Q3VA 4Q3RA 5CEVA 2EIVA 4IU0A 4MYNA 3SJTA 1TBJA 3NIOA 4MYLA 4RHJA 1TBLA 3E6VA 1T4TA 4RHQA 3TH7A 5HJAA 3THEA 3DJ8A 4Q3RC 4Q3UA 4RLAA 4GSZA 3PZLA 1WOIA 1PQ3A 2RLAA 4IU5A 1HQGA 3SL0A 3SKKA 4HZEA 4IXVA 4Q3PA 4IU1A 4Q40A 4HWWA 3NIQA 4MXRA
chains in the Genus database with same CATH superfamily
1P8PA 4QA6A 3NIPA 5EFJD 1RLAA 5DC7A 1ZZ1A 5EEKA 1T4PA 3Q9BA 1T4RA 5G12A 3EZPA 1W22A 1WOGA 5DC5A 4CBTA 5EFHA 3THHA 4CEVA 4FCKA 1P8SA 3E9BA 1P8MA 1WVAA 3MZ7A 5G0XA 5DC8A 5THVA 3SFFA 4Q3SA 3ZNRA 4I06A 1ZPGA 1R1OA 1VKGA 2AEBA 2V5WA 4BKXB 3LHLA 1P8NA 1WVBA 4GSVA 5THUA 3F0RA 4GWCA 4ZUQA 3RQDA 4IE1A 3TF3A 4CQFA 1T4SA 4BZ9A 4A69A 4BZ5A 2VCGA 4Q3QA 3C0YA 4QA4A 4ZUOA 5G10A 4QA5A 2A0MA 4RN1A 5D1CA 3F06A 3M1RA 4GWDA 4MYFA 2CEVA 5THSA 3MZ6A 4IE3A 2GH6A 3LP4A 4BZ7A 3MFVA 4DZ4A 5EENA 3ZNSA 3E6KA 4BZ8A 5RLAA 3GMZA 1P8OA 4RHKA 3TH7A 1WOHA 3MENA 3E8QA 1T64A 4LY1A 2VQWG 4ITYA 3F07A 3EW8A 4RHMA 1XFKA 3C0ZA 3F80A 4HXQA 5HJAA 4LXZA 3C10A 5EEFA 1T5GA 4MYKA 1P8QA 5EF7A 5G3WA 1C3PA 5JI5A 1GQ6A 5THTA 1T69A 2PLLA 2VQVA 1HQ5A 3LP7A 3THJA 4Q41A 4G3HA 2PHOA 2V5XA 1T5FA 3Q9CA 5EFBD 3SL1A 4GSMA 3RLAA 5D1DA 4RHLA 3MFWA 1ZZ3A 3MJLA 4ZUNA 5G0HA 2VQMA 5FCWA 4QA0A 2EF5A 5EFNA 1HQHA 5BWZA 3GN0A 4BZ6A 2ZAVA 3MMRA 4IU4A 2VQQA 5G0YA 5G11A 5EEMA 3EZTA 4FCIA 3E8ZA 1HQFA 4IE2A 4ZUPA 2VQOA 5HJ9A 1TA1A 5IWGA 4Q42A 1TBHA 5FUEA 1ZPEA 4QA7A 3CEVA 4RHIA 2PHAA 5IX0A 3MAXA 1GQ7A 4IXUA 1P8RA 3KV2A 5G0GA 1D3VA 2EF4A 4Q3TA 4CBYA 4ZUMA 1CEVA 4RN0A 1ZZ0A 1HQXA 4Q3VA 5DC6A 4Q3RA 5CEVA 2EIVA 4IU0A 4MYNA 5EF8A 5G0JA 4RHJA 2VQJA 5A2SA 3SJTA 5EFGA 1TBJA 4RN2A 4QA3A 5G0IA 1C3RA 3NIOA 3Q9EA 1TBLA 3E6VA 4MYLA 1T4TA 3Q9FA 3MZ4A 3MZ3A 4QA2A 4RHQA 3DJ8A 4Q3RC 5D1BA 4Q3UA 4RLAA 3THEA 1T67A 3PZLA 4GSZA 1WOIA 1PQ3A 5ICNB 5LI3A 5G17A 1C3SA 5G13A 2RLAA 4IU5A 1HQGA 5G1CA 5G1AA 3SL0A 4QA1A 4HZEA 4IXVA 4ZURA 3SKKA 5EEIA 4Q3PA 3EWFA 5G1BA 3SFHA 4IU1A 5EFKB 4Q40A 4HWWA 3NIQA 4MXRA
chains in the Genus database with same CATH topology
1P8PA 3NIPA 1RLAA 1T4PA 1T4RA 1WOGA 3THHA 4CEVA 4FCKA 1P8SA 3E9BA 1P8MA 1WVAA 4Q3SA 4I06A 1ZPGA 1R1OA 2AEBA 3LHLA 1P8NA 1WVBA 4GSVA 4GWCA 4IE1A 3TF3A 1T4SA 4Q3QA 2A0MA 3M1RA 4GWDA 4MYFA 2CEVA 4IE3A 3LP4A 3MFVA 4DZ4A 3E6KA 5RLAA 3GMZA 1P8OA 4RHKA 1WOHA 3E8QA 4ITYA 4RHMA 1XFKA 3F80A 4HXQA 1T5GA 4MYKA 1P8QA 1GQ6A 2PLLA 3LP7A 1HQ5A 3THJA 4Q41A 4G3HA 2PHOA 1T5FA 3SL1A 4GSMA 3RLAA 4RHLA 3MFWA 3MJLA 2EF5A 1HQHA 3GN0A 2ZAVA 3MMRA 4IU4A 4FCIA 1HQFA 3E8ZA 4IE2A 5HJ9A 1TA1A 4Q42A 1TBHA 1ZPEA 3CEVA 4RHIA 2PHAA 1GQ7A 4IXUA 1P8RA 3KV2A 1D3VA 2EF4A 4Q3TA 1CEVA 1HQXA 4Q3VA 4Q3RA 5CEVA 2EIVA 4IU0A 4MYNA 3SJTA 1TBJA 3NIOA 4MYLA 4RHJA 1TBLA 3E6VA 1T4TA 4RHQA 3TH7A 5HJAA 3THEA 3DJ8A 4Q3RC 4Q3UA 4RLAA 4GSZA 3PZLA 1WOIA 1PQ3A 2RLAA 4IU5A 1HQGA 3SL0A 3SKKA 4HZEA 4IXVA 4Q3PA 4IU1A 4Q40A 4HWWA 3NIQA 4MXRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P8P A;  3NIP A;  1RLA A;  1T4P A;  1T4R A;  1WOG A;  3THH A;  4CEV A;  4FCK A;  1P8S A;  3E9B A;  1P8M A;  1WVA A;  4Q3S A;  4I06 A;  1ZPG A;  1R1O A;  2AEB A;  3LHL A;  1P8N A;  1WVB A;  4GSV A;  4GWC A;  4IE1 A;  3TF3 A;  1T4S A;  4Q3Q A;  2A0M A;  3M1R A;  4GWD A;  4MYF A;  2CEV A;  4IE3 A;  3LP4 A;  3MFV A;  4DZ4 A;  3E6K A;  5RLA A;  3GMZ A;  1P8O A;  4RHK A;  1WOH A;  3E8Q A;  4ITY A;  4RHM A;  1XFK A;  3F80 A;  4HXQ A;  1T5G A;  4MYK A;  1P8Q A;  1GQ6 A;  2PLL A;  3LP7 A;  1HQ5 A;  3THJ A;  4Q41 A;  4G3H A;  2PHO A;  1T5F A;  3SL1 A;  4GSM A;  3RLA A;  4RHL A;  3MFW A;  3MJL A;  2EF5 A;  1HQH A;  3GN0 A;  2ZAV A;  3MMR A;  4IU4 A;  4FCI A;  1HQF A;  3E8Z A;  4IE2 A;  5HJ9 A;  1TA1 A;  4Q42 A;  1TBH A;  1ZPE A;  3CEV A;  4RHI A;  2PHA A;  1GQ7 A;  4IXU A;  1P8R A;  3KV2 A;  1D3V A;  2EF4 A;  4Q3T A;  1CEV A;  1HQX A;  4Q3V A;  4Q3R A;  5CEV A;  2EIV A;  4IU0 A;  4MYN A;  3SJT A;  1TBJ A;  3NIO A;  4MYL A;  4RHJ A;  1TBL A;  3E6V A;  1T4T A;  4RHQ A;  3TH7 A;  5HJA A;  3THE A;  3DJ8 A;  4Q3R C;  4Q3U A;  4RLA A;  4GSZ A;  3PZL A;  1WOI A;  1PQ3 A;  2RLA A;  4IU5 A;  1HQG A;  3SL0 A;  3SKK A;  4HZE A;  4IXV A;  4Q3P A;  4IU1 A;  4Q40 A;  4HWW A;  3NIQ A;  4MXR A; 
#chains in the Genus database with same CATH topology
 1P8P A;  4QA6 A;  3NIP A;  5EFJ D;  1RLA A;  5DC7 A;  1ZZ1 A;  5EEK A;  1T4P A;  3Q9B A;  1T4R A;  5G12 A;  3EZP A;  1W22 A;  1WOG A;  5DC5 A;  4CBT A;  5EFH A;  3THH A;  4CEV A;  4FCK A;  1P8S A;  3E9B A;  1P8M A;  1WVA A;  3MZ7 A;  5G0X A;  5DC8 A;  5THV A;  3SFF A;  4Q3S A;  3ZNR A;  4I06 A;  1ZPG A;  1R1O A;  1VKG A;  2AEB A;  2V5W A;  4BKX B;  3LHL A;  1P8N A;  1WVB A;  4GSV A;  5THU A;  3F0R A;  4GWC A;  4ZUQ A;  3RQD A;  4IE1 A;  3TF3 A;  4CQF A;  1T4S A;  4BZ9 A;  4A69 A;  4BZ5 A;  2VCG A;  4Q3Q A;  3C0Y A;  4QA4 A;  4ZUO A;  5G10 A;  4QA5 A;  2A0M A;  4RN1 A;  5D1C A;  3F06 A;  3M1R A;  4GWD A;  4MYF A;  2CEV A;  5THS A;  3MZ6 A;  4IE3 A;  2GH6 A;  3LP4 A;  4BZ7 A;  3MFV A;  4DZ4 A;  5EEN A;  3ZNS A;  3E6K A;  4BZ8 A;  5RLA A;  3GMZ A;  1P8O A;  4RHK A;  3TH7 A;  1WOH A;  3MEN A;  3E8Q A;  1T64 A;  4LY1 A;  2VQW G;  4ITY A;  3F07 A;  3EW8 A;  4RHM A;  1XFK A;  3C0Z A;  3F80 A;  4HXQ A;  5HJA A;  4LXZ A;  3C10 A;  5EEF A;  1T5G A;  4MYK A;  1P8Q A;  5EF7 A;  5G3W A;  1C3P A;  5JI5 A;  1GQ6 A;  5THT A;  1T69 A;  2PLL A;  2VQV A;  1HQ5 A;  3LP7 A;  3THJ A;  4Q41 A;  4G3H A;  2PHO A;  2V5X A;  1T5F A;  3Q9C A;  5EFB D;  3SL1 A;  4GSM A;  3RLA A;  5D1D A;  4RHL A;  3MFW A;  1ZZ3 A;  3MJL A;  4ZUN A;  5G0H A;  2VQM A;  5FCW A;  4QA0 A;  2EF5 A;  5EFN A;  1HQH A;  5BWZ A;  3GN0 A;  4BZ6 A;  2ZAV A;  3MMR A;  4IU4 A;  2VQQ A;  5G0Y A;  5G11 A;  5EEM A;  3EZT A;  4FCI A;  3E8Z A;  1HQF A;  4IE2 A;  4ZUP A;  2VQO A;  5HJ9 A;  1TA1 A;  5IWG A;  4Q42 A;  1TBH A;  5FUE A;  1ZPE A;  4QA7 A;  3CEV A;  4RHI A;  2PHA A;  5IX0 A;  3MAX A;  1GQ7 A;  4IXU A;  1P8R A;  3KV2 A;  5G0G A;  1D3V A;  2EF4 A;  4Q3T A;  4CBY A;  4ZUM A;  1CEV A;  4RN0 A;  1ZZ0 A;  1HQX A;  4Q3V A;  5DC6 A;  4Q3R A;  5CEV A;  2EIV A;  4IU0 A;  4MYN A;  5EF8 A;  5G0J A;  4RHJ A;  2VQJ A;  5A2S A;  3SJT A;  5EFG A;  1TBJ A;  4RN2 A;  4QA3 A;  5G0I A;  1C3R A;  3NIO A;  3Q9E A;  1TBL A;  3E6V A;  4MYL A;  1T4T A;  3Q9F A;  3MZ4 A;  3MZ3 A;  4QA2 A;  4RHQ A;  3DJ8 A;  4Q3R C;  5D1B A;  4Q3U A;  4RLA A;  3THE A;  1T67 A;  3PZL A;  4GSZ A;  1WOI A;  1PQ3 A;  5ICN B;  5LI3 A;  5G17 A;  1C3S A;  5G13 A;  2RLA A;  4IU5 A;  1HQG A;  5G1C A;  5G1A A;  3SL0 A;  4QA1 A;  4HZE A;  4IXV A;  4ZUR A;  3SKK A;  5EEI A;  4Q3P A;  3EWF A;  5G1B A;  3SFH A;  4IU1 A;  5EFK B;  4Q40 A;  4HWW A;  3NIQ A;  4MXR A; 
#chains in the Genus database with same CATH homology
 1P8P A;  3NIP A;  1RLA A;  1T4P A;  1T4R A;  1WOG A;  3THH A;  4CEV A;  4FCK A;  1P8S A;  3E9B A;  1P8M A;  1WVA A;  4Q3S A;  4I06 A;  1ZPG A;  1R1O A;  2AEB A;  3LHL A;  1P8N A;  1WVB A;  4GSV A;  4GWC A;  4IE1 A;  3TF3 A;  1T4S A;  4Q3Q A;  2A0M A;  3M1R A;  4GWD A;  4MYF A;  2CEV A;  4IE3 A;  3LP4 A;  3MFV A;  4DZ4 A;  3E6K A;  5RLA A;  3GMZ A;  1P8O A;  4RHK A;  1WOH A;  3E8Q A;  4ITY A;  4RHM A;  1XFK A;  3F80 A;  4HXQ A;  1T5G A;  4MYK A;  1P8Q A;  1GQ6 A;  2PLL A;  3LP7 A;  1HQ5 A;  3THJ A;  4Q41 A;  4G3H A;  2PHO A;  1T5F A;  3SL1 A;  4GSM A;  3RLA A;  4RHL A;  3MFW A;  3MJL A;  2EF5 A;  1HQH A;  3GN0 A;  2ZAV A;  3MMR A;  4IU4 A;  4FCI A;  1HQF A;  3E8Z A;  4IE2 A;  5HJ9 A;  1TA1 A;  4Q42 A;  1TBH A;  1ZPE A;  3CEV A;  4RHI A;  2PHA A;  1GQ7 A;  4IXU A;  1P8R A;  3KV2 A;  1D3V A;  2EF4 A;  4Q3T A;  1CEV A;  1HQX A;  4Q3V A;  4Q3R A;  5CEV A;  2EIV A;  4IU0 A;  4MYN A;  3SJT A;  1TBJ A;  3NIO A;  4MYL A;  4RHJ A;  1TBL A;  3E6V A;  1T4T A;  4RHQ A;  3TH7 A;  5HJA A;  3THE A;  3DJ8 A;  4Q3R C;  4Q3U A;  4RLA A;  4GSZ A;  3PZL A;  1WOI A;  1PQ3 A;  2RLA A;  4IU5 A;  1HQG A;  3SL0 A;  3SKK A;  4HZE A;  4IXV A;  4Q3P A;  4IU1 A;  4Q40 A;  4HWW A;  3NIQ A;  4MXR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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